| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,925,019 | (T)8→7 | intergenic (+63/‑18) | yebT → / → rsmF | lipid‑binding membrane homeostasis protein YebT/16S rRNA (cytosine(1407)‑C(5))‑methyltransferase RsmF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,925,012 | 0 | T | . | 99.2% | 1247.1 / 0.9 | 262 | intergenic (+56/‑25) | yebT/rsmF | lipid‑binding membrane homeostasis protein YebT/16S rRNA (cytosine(1407)‑C(5))‑methyltransferase RsmF |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base . (151/108); total (152/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 290 total aligned reads displayed.
GCCCAGGAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTG > NZ_CP025268/1924876‑1925147 | gCCCAGGAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttt < 1:3027619/140‑1 (MQ=255) ggAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgc < 1:3224350/140‑3 (MQ=255) ggAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgc < 1:2727119/140‑3 (MQ=255) ggAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgc < 1:2657068/140‑3 (MQ=255) ggAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgc < 1:2577602/140‑3 (MQ=255) gAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgcc < 1:821650/140‑4 (MQ=255) gAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgcc < 2:2653009/140‑4 (MQ=255) aaGGCAAACACTGCCTGTTGCAGTAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGGGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgcca < 2:455921/140‑5 (MQ=255) aGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAg < 2:983174/140‑1 (MQ=255) aGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAg < 2:3281229/140‑1 (MQ=255) aGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTAGGCTAAACGGCGCGCCTG‑TTTTTTTGCCAg < 2:3837305/140‑1 (MQ=255) aGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGATCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAg < 2:1007760/140‑1 (MQ=255) aGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTACCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAg < 2:4539072/140‑1 (MQ=255) aGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCCTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAg < 2:1580744/140‑1 (MQ=255) cAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTgg > 1:854277/1‑140 (MQ=255) cAAACACTTCCGGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGTACTGCGCTTCCCAAATAATGCTCACTGCTCCTGCGTGCCTGCGCCGGAGCGTTTATCCTATACTGCGCGCCTG‑TTTTTTTGCCAGTgg > 2:1516325/1‑140 (MQ=255) aaaCACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAAGTGCGCGCCTG‑TTTTTTTGCCAGTGGt > 2:4017331/1‑140 (MQ=255) cacTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACa < 1:4947146/140‑1 (MQ=255) cacTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACa < 1:4271082/140‑1 (MQ=255) tCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCt < 2:2796831/140‑1 (MQ=255) ccTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGGACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCCGTGGTACATGCTc > 2:389835/1‑140 (MQ=255) ccTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTc > 1:2049070/1‑140 (MQ=255) cggTTGTAGGAAAGTGAACCGAAAGAGTGGAGTGAATTGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGAGTTTATGCTATACTGCGCGCCTG‑TTTTGTTGCCAGTGGTACATGCTCg < 2:2072093/138‑1 (MQ=255) cTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAGTAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCGTG‑TTTTTTTGCCAGTGGTACATGCTCg < 2:3757885/140‑1 (MQ=255) cTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGGGCGTTTATGCTAATCTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCg < 2:1255200/140‑1 (MQ=255) cTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCg < 1:3770369/140‑1 (MQ=255) gTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAGTGCCCAGTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTg < 2:3847982/140‑1 (MQ=255) tGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑c < 2:4967336/140‑1 (MQ=255) aaGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAacac < 2:674242/140‑1 (MQ=255) aaGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAacac < 2:2332673/140‑1 (MQ=255) gTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAacacac < 1:4417689/140‑1 (MQ=255) tGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGtttttttgcc > 1:2114937/1‑95 (MQ=255) tGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTg > 1:1938705/1‑115 (MQ=255) tGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTg < 2:1938705/115‑1 (MQ=255) tGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGcc > 1:2487534/1‑140 (MQ=255) aTGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCttt > 2:2035769/1‑140 (MQ=255) aTGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCttt > 2:3103474/1‑140 (MQ=255) tGGGGAACTGCGCTTGGCAAATAGTGCCCACTGCTCCGGCGTGCCCGCGGCGGAGCGTTTATGCTACACTGCGCGCCTG‑TTTTTTTGCCAGTGGGACATGCTCGTGG‑ACCAACACGCCGTTTATTTCCCGGACGCCTTTc < 2:2704317/140‑1 (MQ=255) ggggAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCt > 1:1699533/1‑140 (MQ=255) ggAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGa > 2:1376570/1‑140 (MQ=255) gAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGac > 2:3116727/1‑140 (MQ=255) tGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACaa > 1:2981787/1‑140 (MQ=255) tGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACaa > 2:3439247/1‑140 (MQ=255) cgcTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCCGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAAt < 2:1150917/140‑1 (MQ=255) cgcTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAAt < 2:1150783/140‑1 (MQ=255) ttCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATgcg < 1:1790454/140‑1 (MQ=255) tCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATgcgc < 1:638861/140‑1 (MQ=255) aatGCCCACTGCTCCGCCGTGCCTGCGCCGGAGCGTTTATGCTAACCTGCGCGCCTG‑TTTTTTTGCCCGTGGTACATGCTCGTGG‑CCCAACCCACCGTTTATTACCCGGACGCCTTTCTGACACAAATGCGCGAAGCGAt < 2:2140828/140‑1 (MQ=255) atGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATg > 1:363274/1‑140 (MQ=255) tGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGc < 1:2071430/140‑1 (MQ=255) gCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGcc > 1:1226707/1‑140 (MQ=255) gCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGCTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCCGACACAAATGCGCGAAGCGATGcc > 2:3528151/1‑140 (MQ=255) cccACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCt > 2:776823/1‑140 (MQ=255) aCTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCg > 1:1126561/1‑140 (MQ=255) cTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGa > 1:1425365/1‑140 (MQ=255) acgCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGa > 2:3159067/3‑140 (MQ=255) tCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGct < 2:1648875/140‑1 (MQ=255) tCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGct > 1:1367385/1‑140 (MQ=255) cGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGctct > 1:3981750/1‑140 (MQ=255) cGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGACAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGctct < 2:3197602/140‑1 (MQ=255) cGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑GTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGctct > 2:4679844/1‑140 (MQ=255) ggCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCtctc > 1:4826869/1‑140 (MQ=255) gCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCa > 1:532801/1‑140 (MQ=255) gCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCa > 1:942833/1‑140 (MQ=255) gCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCa > 1:1475175/1‑140 (MQ=255) gTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCAtt < 2:3715381/140‑1 (MQ=255) tGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGGCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGGGCGAAGCGATGCCTTCGACGGTCTCAtct > 2:3925225/1‑138 (MQ=255) tGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCAttt > 1:4244307/1‑140 (MQ=255) tGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCAttt > 1:1187085/1‑140 (MQ=255) tGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCAttt > 1:1252099/1‑140 (MQ=255) ccTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGGCCCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTtg > 1:2393324/1‑140 (MQ=255) ccTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTtga > 2:636655/1‑140 (MQ=255) ccTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTtga > 1:4555592/1‑140 (MQ=255) ccTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTtga > 1:5068558/1‑140 (MQ=255) cTGCGCCGGAGCGTTTCTGCTAAACTGCTCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACGGTTTACTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATTCCTTCGACGCTCTCATTtgat < 2:4238831/140‑1 (MQ=255) cTGCGCCGGAGCGTTTATGCTAAACTGCTCGCCT‑TTTTTTTTGCCAGTGGTACATGCTCGTCG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCTATGCCTTCGTCGCTCTCCTTtgat < 2:4787143/140‑1 (MQ=255) gcgcCGGAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTtgatga > 1:3524376/1‑140 (MQ=255) gcgCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCt < 2:4917149/138‑1 (MQ=255) gAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCt < 2:1300658/140‑1 (MQ=255) gAGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTGTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCt < 2:84148/140‑1 (MQ=255) aGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCtt > 1:546127/1‑140 (MQ=255) aGCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCtt > 1:3327539/1‑140 (MQ=255) gCGTTTATGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTg < 1:2286884/140‑1 (MQ=255) aTGCTAAACTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCt > 2:598630/1‑140 (MQ=255) aCTGCGCGCCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAgcg > 2:3986904/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAacacac < 1:3399176/46‑1 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCg < 2:2417880/98‑1 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGTCCg > 1:1765799/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 1:1019839/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 1:3136015/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 2:3272556/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 2:2352301/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 1:2935804/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 2:1761296/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 1:4478065/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 1:4682204/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCg > 1:1606781/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTCG‑CCCAACACACCGTATATTGCCCGGACGCCTTGCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCCGTCAGAGCCCg > 2:5115103/1‑140 (MQ=255) cgcgcCTG‑TTTTTTTGACAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTCTTTCCCGGACGCCTTTCTGCCACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGccct > 2:1193378/1‑139 (MQ=255) gcCTG‑TTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTg < 1:2152261/140‑1 (MQ=255) | GCCCAGGAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTTGCCAGTGGTACATGCTCGTGG‑CCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTG > NZ_CP025268/1924876‑1925147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |