| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,898,969 | (G)5→4 | pseudogene (278/667 nt) | yieH → | 6‑phosphogluconate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,898,965 | 0 | G | . | 99.3% | 1352.7 / 1.2 | 283 | pseudogene (274/667 nt) | yieH | 6‑phosphogluconate phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base . (167/113); total (169/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 292 total aligned reads displayed.
TTTCAAAGGTGTAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAAGGGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAGCGGCTAC > NZ_CP025268/3898826‑3899100 | tttCAAAGGTGTAAAACTGTACGAAATTATCGATATTGTTGCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCGGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAAg > 1:619154/1‑140 (MQ=255) tCAAAGGTGTAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAAggg > 1:3447605/1‑140 (MQ=255) tgtAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAg > 1:1333467/1‑140 (MQ=255) tAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAGGCCATCGAA‑GGGGCTGGAgag > 2:3370889/1‑138 (MQ=255) tAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAgcg < 1:1059552/140‑1 (MQ=255) tAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAgcg > 2:1127181/1‑140 (MQ=255) tAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATGCAGAACGGGAAGCCATCGAA‑GGGGCTGGAgcg > 2:24765/1‑140 (MQ=255) aaaCTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCt < 1:2617532/140‑1 (MQ=255) aCTGTAAGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCACAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTcc < 2:3779269/140‑1 (MQ=255) tGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTg < 1:4976541/140‑1 (MQ=255) tACGAATTTATCGATATTGTTTCGGTTGAACATCTTGTTACATTAGCGAATATAGAAGCTGAACACGTTTACCTGGCAGTAGTGGCGCGGCTGTGCGAGTCGGTACTGGTAGCCATCGCA‑GGGTCGGGAGCGCTCCTGTc > 2:1957221/1‑140 (MQ=255) tACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTc > 2:1153230/1‑140 (MQ=255) tACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTc > 1:3719726/1‑140 (MQ=255) tACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTc > 1:2354430/1‑140 (MQ=255) tACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTc > 1:1877476/1‑140 (MQ=255) gAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGc < 1:3881400/140‑1 (MQ=255) tATCGATATTGTTTCCCTTGAACATGGTGTTCCGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCa > 1:152116/1‑140 (MQ=255) tCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACt < 1:1285669/140‑1 (MQ=255) tCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACt < 1:4863822/140‑1 (MQ=255) tCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACt > 1:2925738/1‑140 (MQ=255) atatTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTgcg < 2:4060290/140‑1 (MQ=255) atatTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGGCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTgcg < 1:3013375/140‑1 (MQ=255) atatTGTTTCACTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGCCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTgcg < 1:4119923/140‑1 (MQ=255) atTGTTTCCCTTGAGCATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGAGTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTGCTGTCAGCGATCACTgcgct < 2:4954183/140‑2 (MQ=255) atTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGcc < 2:1358296/140‑1 (MQ=255) atTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGcc < 2:2252914/140‑1 (MQ=255) atTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGCTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGcc < 2:1971052/140‑1 (MQ=255) ttGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCa < 1:4781298/140‑1 (MQ=255) gTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAAt < 2:17256/140‑1 (MQ=255) tttCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGcc < 2:1537158/136‑1 (MQ=255) ttCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAAtgt < 1:2267027/140‑1 (MQ=255) tCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAAtgtg > 1:1797660/1‑140 (MQ=255) ccTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGCGCGCTCCTGTCAGCGATCACTGCGCCAAtgtgtg < 2:1066199/140‑1 (MQ=255) ccTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAAtgtgtg < 2:5100365/140‑1 (MQ=255) cTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAAtgtgtgt > 1:257095/1‑140 (MQ=255) cTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCGGGAGCGCTCCTGTCAGCGATCACTGCGCCAAtgtgtgt > 1:1376709/1‑140 (MQ=255) tGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTgg > 1:1939460/1‑140 (MQ=255) aaCATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTa > 1:501923/1‑140 (MQ=255) ggTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGTCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTaa > 1:72669/1‑140 (MQ=255) ggTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTAACGTGCAGAAGTCGCTCGGCTGTTCGATTAAGAACTGGAAGACATCGAA‑GGGACTGGAGCGCTCCTGTCAGCGATCACTTCGCAAATGAGTGTGGTATCTaa > 2:2937914/1‑140 (MQ=255) ggTGTTACGTTAGCGAAAACAAAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGGTCGATCCAGAACTGGGAGCCATCGAA‑GGGGCTGGAGCGGTCCTGTCGGCGGTCACTGCGCCACTATGTGTGATATCTaa > 2:4242693/1‑140 (MQ=255) tACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGcc > 2:292861/1‑140 (MQ=255) tACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGcc > 1:1729082/1‑140 (MQ=255) cGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCa > 2:765464/1‑140 (MQ=255) ttAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCaaa > 1:1031841/1‑140 (MQ=255) tAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTGACGGCCCAAAt > 1:2424233/1‑140 (MQ=255) aGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATa > 2:1666433/1‑140 (MQ=255) gctaaaaCAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGCTTTAGAACTTGAAGCGATCGAA‑GGGGCTGGAGCGCGCCTCTCAGCGATCACTGTGCCAATGTGTGTGGTTTCTAACGGCCCAAAtca > 2:4580218/4‑138 (MQ=255) gctaaaaCAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCGGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 2:2663044/4‑140 (MQ=255) gCGAAAACAGAAGCTGAACGCGTTGAGCGTGCAGAAGTCGCGCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGTCGGGAGCGCTCCTGTGAGCGTTCACTGGGTAAATGTGTGTGTTATCTAATGTCCGAAAtca > 2:4152759/1‑138 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAAt < 2:1662550/113‑1 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 2:4388757/1‑140 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 2:4819472/1‑140 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 2:3630342/1‑140 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 1:5097623/1‑140 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 1:3110263/1‑140 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 1:4905102/1‑140 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 1:1245849/1‑140 (MQ=255) gCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGAGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATaa > 2:3860383/1‑140 (MQ=255) aaaCAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACaaa < 2:4755008/140‑1 (MQ=255) aaCAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACaaaa > 1:3274958/1‑140 (MQ=255) cAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATg < 1:4343206/140‑1 (MQ=255) gCTGAACACTTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATgcagca < 2:3545567/140‑1 (MQ=255) gAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTc < 1:2768717/140‑1 (MQ=255) tttACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGc < 1:2127935/140‑1 (MQ=255) tttACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGc < 2:1930777/140‑1 (MQ=255) tttACCGTGCAGAAGGCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTCACGGCCCAAATAACAAAATGCAGCATTCTATGGGc < 2:739485/140‑1 (MQ=255) ttACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCa > 1:3619413/1‑140 (MQ=255) tACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAACTGCAGCATTCTATGGGCaa > 1:1843133/1‑140 (MQ=255) tACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCaa < 1:836824/140‑1 (MQ=255) gTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTg > 1:670423/1‑140 (MQ=255) tGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGa > 2:60344/1‑140 (MQ=255) tGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGa > 1:4533961/1‑140 (MQ=255) tGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGa > 2:1008085/1‑140 (MQ=255) cAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCCATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATCCTATGGGCAAGCCGAat > 2:2767518/1‑140 (MQ=255) cAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAat > 1:1559198/1‑140 (MQ=255) cAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAat > 1:3789438/1‑140 (MQ=255) cAGAAGCCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAat > 2:2404559/1‑140 (MQ=255) aGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAata < 1:3494515/140‑1 (MQ=255) aaGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATg < 1:2707555/140‑1 (MQ=255) gTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGCGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGACTATGtg > 1:4509585/1‑139 (MQ=255) gTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGtt > 1:4622393/1‑140 (MQ=255) tCGCTCGGCTGTTCGATTCCGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTg > 2:3237962/1‑140 (MQ=255) gCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCa > 2:3107255/1‑140 (MQ=255) gCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCa > 1:3994933/1‑140 (MQ=255) cTGTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACCAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACtt < 2:2539495/140‑1 (MQ=255) gTTCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTcc > 2:811360/1‑140 (MQ=255) ttCGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTccc > 1:1643819/1‑140 (MQ=255) cGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCgg > 1:1982704/1‑140 (MQ=255) cGATTCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCgg < 2:1413832/140‑1 (MQ=255) ttCAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATa > 1:3304054/1‑140 (MQ=255) cAGAACTGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATaaa > 1:3464701/1‑140 (MQ=255) tGGAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTc < 2:3184208/140‑1 (MQ=255) gAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATgca > 2:3414999/1‑86 (MQ=255) gAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATgca < 1:3414999/86‑1 (MQ=255) gAAGCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAg > 1:1465055/1‑140 (MQ=255) gCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAGCgg < 1:3979572/140‑1 (MQ=255) gCCATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCCATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACGTCCCGGATAAACTGTTCAGCgg < 1:4328406/140‑1 (MQ=255) cATCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAGCGGCt > 2:1772569/1‑140 (MQ=255) aTCGAA‑GGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAGCGGCTa < 2:2990977/140‑1 (MQ=255) | TTTCAAAGGTGTAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAAGGGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAGCGGCTAC > NZ_CP025268/3898826‑3899100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |