| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,175,450 | +G | pseudogene (483/632 nt) | comR ← | TetR family copper‑responsive transcriptional repressor ComR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,175,448 | 1 | . | G | 96.8% | 822.8 / 16.8 | 251 | pseudogene (485/632 nt) | comR | TetR family copper‑responsive transcriptional repressor ComR |
| Reads supporting (aligned to +/- strand): ref base . (3/5); new base G (117/126); total (120/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 260 total aligned reads displayed.
CAGTTCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑G‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAA > NZ_CP025268/1175310‑1175581 | ttCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g‑gga > 2:59322/1‑138 (MQ=255) ttCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g‑gga > 2:2763245/1‑138 (MQ=255) gCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTcc > 1:712894/1‑140 (MQ=255) aTAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcg < 2:496555/140‑1 (MQ=255) aaaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg > 1:3180656/1‑140 (MQ=255) aaaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg < 2:2962150/140‑1 (MQ=255) aaaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg < 2:2504217/140‑1 (MQ=255) aaaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg > 1:3042875/1‑140 (MQ=255) cAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCtt > 1:3249115/1‑140 (MQ=255) gTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCg < 2:2498447/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 1:639482/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 1:258928/140‑1 (MQ=255) ttCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGa > 1:4110374/1‑140 (MQ=255) ggCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATa < 2:4818998/140‑1 (MQ=255) cAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaa < 1:1102838/140‑1 (MQ=255) cAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaa < 2:3923489/140‑1 (MQ=255) aaTCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaaa > 1:4744963/1‑140 (MQ=255) aTCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaaaa < 1:3695563/140‑1 (MQ=255) aTCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaaaa < 1:91290/140‑1 (MQ=255) aTCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaaaa < 2:961652/140‑1 (MQ=255) cTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAAct < 1:3893795/140‑1 (MQ=255) aTCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAGTACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAActgctg > 2:4482623/1‑140 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:300108/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 2:3117312/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:484264/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTCGACATAAAAACTGCTGCAAAGTg < 2:3041255/140‑1 (MQ=255) tCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTgcg < 2:3851013/140‑1 (MQ=255) gATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTg > 2:1567687/1‑140 (MQ=255) cTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCa < 1:83582/140‑1 (MQ=255) ttCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCAt < 2:374161/140‑1 (MQ=255) tCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATg > 2:1113289/1‑140 (MQ=255) tCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATg > 1:1438205/1‑140 (MQ=255) cgTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAATTGCGCTCTTGCATCGCATGGCg > 2:2825377/1‑140 (MQ=255) tGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCgcg > 2:806632/1‑138 (MQ=255) gATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCa < 2:4207864/140‑1 (MQ=255) gATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCa < 1:4636676/140‑1 (MQ=255) aTCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCaa > 2:3621937/1‑140 (MQ=255) cGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACg < 1:309033/140‑1 (MQ=255) cGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACg < 2:4744963/140‑1 (MQ=255) aCATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTa < 1:1277316/140‑1 (MQ=255) ccccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTgg > 1:1579489/1‑140 (MQ=255) ccccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTgg > 1:1890760/1‑140 (MQ=255) ccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGATATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCg > 1:2821763/1‑140 (MQ=255) ccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCg > 1:1015501/1‑140 (MQ=255) ccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCg > 1:618427/1‑140 (MQ=255) cTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGATCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGa < 2:2097354/140‑1 (MQ=255) gAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGata < 2:1128857/140‑1 (MQ=255) aataatACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGatat > 1:4925046/1‑140 (MQ=255) ataataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATAtc > 2:4293102/1‑140 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc < 2:3296144/140‑1 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc < 1:460907/140‑1 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc < 1:4473918/140‑1 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGATCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc < 1:457495/140‑1 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 2:4448774/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 1:3476224/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 2:1374236/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 2:1315673/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 1:416650/1‑140 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 1:665792/140‑1 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 2:2342119/140‑1 (MQ=255) aCAATTAAGGAATGCAGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTCCCCCGCGCGCGTGTAGTTGACATAAAAACTGCTGTAAAGTGCGCTATTGCATCGCAGGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 2:664392/140‑1 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTTGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGCATc > 1:574576/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg < 2:3280034/53‑1 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTGTTGCATCGCATGGCGTGATTTCAACGGATTGGCGATATCTTCTGACTc > 2:1803349/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAAtt > 2:1408589/1‑139 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:2378522/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:2418432/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:2612661/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:1999336/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:1632844/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GACTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTCCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:1196336/1‑140 (MQ=255) gAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTgggg > 1:3776718/1‑140 (MQ=255) gAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTgggg > 2:3155724/1‑140 (MQ=255) aaTTCTGCCAGCTGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 1:5035239/140‑1 (MQ=255) aaTTCTGCCAGATGTGTCGCGTCACAGTGGGGC‑GTGATTTCCCCGCGCGCTTGTCGTTGACATAAAAGCTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCAGAATCTGGGga < 2:3633871/140‑1 (MQ=255) aaTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 1:4314013/140‑1 (MQ=255) ttCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGgaga > 2:2641532/1‑140 (MQ=255) ttCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGgaga < 2:2929365/140‑1 (MQ=255) ttCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGgaga > 1:2116941/1‑140 (MQ=255) ttCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGgaga < 2:2455052/140‑1 (MQ=255) cTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAgg > 2:1016593/1‑140 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 2:1951191/140‑1 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg > 1:434520/1‑140 (MQ=255) ccccAGTTGTGTCCCGTCACAGCGCGGC‑GCGATTACCCCCCGCGCTTGTCGTTGTAATAACAACTGCTGCCAACTGCGCTCTTGCTTCGCATGGCGTGATTTCAACGTATTGGCCATATCTCCCGAATCTGGGGAGCggg < 2:523797/138‑1 (MQ=255) ccAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGggtg > 1:2205174/1‑140 (MQ=255) cAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGggtgg < 2:1920301/140‑1 (MQ=255) cAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGggtgg < 1:3979948/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGGATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:3562595/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:503387/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 2:3402482/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:4408194/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:2067656/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:2423125/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:1312449/140‑1 (MQ=255) gtcacgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCCAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgtt > 2:3941915/1‑140 (MQ=255) tcacgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga > 2:3878069/1‑124 (MQ=255) cacgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgt > 1:3519852/1‑140 (MQ=255) acgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgtt < 1:2481155/140‑1 (MQ=255) acgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAAAGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgtt < 2:4031920/140‑1 (MQ=255) gTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGa > 2:1230072/1‑140 (MQ=255) | CAGTTCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑G‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAA > NZ_CP025268/1175310‑1175581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |