| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 247,295 | +G | intergenic (+4/‑171) | yafL → / → rayT | C40 family peptidase/REP‑associated tyrosine transposase RayT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 247,294 | 1 | . | G | 99.6% | 776.3 / NA | 231 | intergenic (+3/‑172) | yafL/rayT | C40 family peptidase/REP‑associated tyrosine transposase RayT |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base G (82/147); minor base A (0/1); total (83/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 276 total aligned reads displayed.
TGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAAGA‑C‑GATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGCC > NZ_CP025268/247155‑247423 | tgtATTTGGGCGATGGGCAATTTATCTAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCCGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:2588207/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:2047855/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:2962101/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c < 1:824011/140‑1 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:3475313/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:2716595/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:2700347/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:4100592/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:4486268/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 2:656158/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGACGCCACGTACCGGCGAAACCATTCGGATAAGCCGCTTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 2:3658584/1‑140 (MQ=255) gtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑g > 1:2392555/1‑140 (MQ=255) gtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑g > 1:4543129/1‑140 (MQ=255) gtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑g > 2:1375565/1‑140 (MQ=255) tATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCTCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑gg > 2:4684256/1‑139 (MQ=255) tttGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑ggat < 2:3475843/140‑4 (MQ=255) tttGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑ggat < 1:2451807/140‑4 (MQ=255) tGGGCGATGGGCAATTTATCGAGTCGCGACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑ggataa < 2:1636785/140‑6 (MQ=255) tGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑ggataa < 2:2201014/140‑6 (MQ=255) gggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAg > 2:1789625/1‑140 (MQ=255) cGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCg > 1:4687622/1‑140 (MQ=255) cGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCg > 1:868247/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGCTTTTGCCGGACGAGACGATTTTGTAGGC‑CGGATAAGGCGtt > 2:3062005/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 1:2933329/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 2:1781224/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 1:3236965/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 1:1939046/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 2:3977395/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 1:3791171/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 2:2013951/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 2:1183926/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGtt > 2:4662409/1‑140 (MQ=255) aTGGGCAATTTATCGAGGCGCCACGTAGCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCCCGCAGGAGTTGGACGGAAGAGACGATTTTGTAGGAGG‑GATAAGGCGtt > 2:3764143/1‑140 (MQ=255) gggCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTa > 1:4884150/1‑140 (MQ=255) ggCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTAc > 1:768169/1‑140 (MQ=255) aaTTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTAcgcc < 1:3142032/140‑1 (MQ=255) aTTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAGCCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTAcgccg < 2:490734/140‑1 (MQ=255) tCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTGGGA‑CGGATAAGGCGTTTACGCCGCATcc < 2:3319298/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATGAGCCGATTAGCCGAACCTTTCTGGCAGGCCCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCgg < 2:4225973/140‑1 (MQ=39) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCgg < 1:5058962/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCgg < 2:733685/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCgg < 1:4006327/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCgg < 2:4405152/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCgg < 2:545186/140‑1 (MQ=255) gAGTCGACACGTACCGGCGAAACCATTCGGAGAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCgg < 1:3685118/140‑1 (MQ=39) cGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGt > 2:2178358/1‑140 (MQ=255) gCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGtt > 1:2262546/1‑140 (MQ=255) ccACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTg > 2:1829454/1‑140 (MQ=255) cACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGt < 2:4424601/140‑1 (MQ=255) aCGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTa < 1:1812707/140‑1 (MQ=255) gTACCGGCGAAATCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACg < 1:600989/140‑1 (MQ=255) gTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACg < 2:4351044/140‑1 (MQ=255) tACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGc > 1:1371234/1‑140 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa > 1:3061590/1‑140 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGCA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg < 2:2730704/140‑1 (MQ=255) ggCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGt < 1:4771304/140‑1 (MQ=255) aaCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTg > 1:1119280/1‑140 (MQ=255) cactCGGATAAACAGATTAGACGAAACTTTCTGGCAGTACCATTTTTTGGGCACGCGCAGGATTTTGACAGAAGAGACGATTTTGAAGGA‑CAGATAAGGCGTTTCCGCCGCATCCGGCAGTTGTACGCAGGTCCCTGATg < 2:2378197/137‑1 (MQ=255) ttCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCg > 1:4447932/1‑140 (MQ=255) aaGCCGCTTAGCCGAAACTTTCTGGCAGGCCCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTgg < 1:3878864/140‑1 (MQ=37) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:235776/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 2:4805627/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 2:2944499/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:4791770/140‑1 (MQ=255) aGCCGATTAGCCCAACCCTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTCCGCAGGTGCCTGATGCGACGCTGgc < 2:2885974/140‑1 (MQ=38) gATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGt < 2:2452655/140‑1 (MQ=255) aTTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTc < 1:2775160/140‑1 (MQ=255) aTTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTc < 1:1541314/140‑1 (MQ=255) tAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCtt < 2:5093036/140‑1 (MQ=255) aGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTa < 2:2262807/140‑1 (MQ=255) aGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCAGCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTa < 2:3865180/140‑1 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc > 2:4100289/1‑140 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc < 1:4599138/140‑1 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc < 1:690448/140‑1 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc < 2:4109825/140‑1 (MQ=255) gcaCCATTCTGGCAGGAGCATTTTTTGGGGGCGCGTAGGCTTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGTAGCATCCGGTAGTTGTACGCAGGTGCCTGATGCGACGCTAGCGCGTCTTATCAt < 2:4486268/138‑1 (MQ=37) gAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTCGGA‑CGGATAAGGCGTTTCCGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCAt < 2:1532961/140‑1 (MQ=37) gAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCAt < 1:3925049/140‑1 (MQ=255) gAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCAt < 2:107376/140‑1 (MQ=255) ttCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACTGAAGAGACGATGTTGTAGGA‑CGGATAAGTCGTTTACGCCGCATCCGGCAGTTTGCCCCAGGTCATTGATGCGACGCTTGCGCGTCTTATCATTCCTAc > 2:1278726/1‑140 (MQ=25) cTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGa > 1:173526/1‑140 (MQ=255) cTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGa > 2:2556203/1‑140 (MQ=255) ggACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCcgc > 2:1734687/1‑140 (MQ=255) aCCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGa > 1:2751655/1‑140 (MQ=255) ccATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGaa < 1:1993236/140‑1 (MQ=255) cgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTa > 2:3569729/1‑105 (MQ=255) cgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTa < 1:3569562/105‑1 (MQ=255) cgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGc > 2:3697172/1‑140 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:382026/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 2:3352385/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 2:2635424/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:1215255/140‑1 (MQ=255) tttGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGata < 2:1017792/140‑1 (MQ=255) tttGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCCTTCCCGata < 1:4027631/140‑1 (MQ=25) ttGACGGAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGatat < 2:3941073/140‑1 (MQ=255) ggAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAaac < 1:1430335/140‑1 (MQ=255) gAAGAGACGATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAaaca > 1:3509034/1‑140 (MQ=255) gATTTTGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCAtt < 2:4975044/140‑1 (MQ=255) ttttGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGGCGCTGTCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGc < 2:4701416/140‑1 (MQ=37) ttttGTAGGA‑CGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGc < 1:1006118/140‑1 (MQ=255) | TGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAAGA‑C‑GATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGCC > NZ_CP025268/247155‑247423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |