| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,014,858 | +G | intergenic (+159/+61) | arcC → / ← yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,014,857 | 1 | . | G | 97.3% | 972.7 / 17.7 | 298 | intergenic (+158/+62) | arcC/yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base . (2/6); new base G (166/124); total (168/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 299 total aligned reads displayed.
ACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CA‑G‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014721‑3014991 | aCCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CA‑ggc > 1:4773228/1‑138 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAtt > 1:3492535/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAtt > 1:234727/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAtt > 2:2138927/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAtt > 1:1765965/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAtt > 1:1981017/1‑140 (MQ=255) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAttt > 2:4103987/1‑140 (MQ=255) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAttt < 2:3459779/140‑1 (MQ=255) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAttt > 2:3036857/1‑140 (MQ=255) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAAttt > 1:4089846/1‑140 (MQ=255) cGGCCAACGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTGGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTg > 1:2522303/1‑140 (MQ=255) cGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTg > 1:4570082/1‑140 (MQ=255) ccAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCg > 2:4206390/1‑140 (MQ=255) ccAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCg > 2:2508333/1‑140 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGCTTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcat < 1:1026184/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcat < 2:2991104/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcat < 2:389102/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcat < 1:3618174/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcat < 1:3389601/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcat < 1:3173205/140‑1 (MQ=255) gTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcatc < 1:6918/140‑1 (MQ=255) tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcatca > 1:523045/1‑140 (MQ=255) tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGtcatca > 2:4597689/1‑140 (MQ=255) aagtaagtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGt < 1:3266356/140‑1 (MQ=255) aagtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCATCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCa > 2:3309861/1‑140 (MQ=255) gtGCGCGTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAgg < 1:4597188/140‑1 (MQ=255) tGCGCTTTGTTGATGCCGGATGCGGCGCGCGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCAGTTGTAGGCCTGATAAGGGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCGGTCTCAGGc > 2:1404109/1‑140 (MQ=18) tGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGc < 1:3109243/140‑1 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGcc > 2:384292/1‑140 (MQ=255) gcgcTTCGTTGATGCCCGATCCCGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAACTTCAATAGATTGCAATGCACTTGTAGGCCTCATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTATCATCAGTCTCAGGcc < 2:2886249/140‑1 (MQ=21) gcTTTGTTGATGGCGGATGCTGAGCGAATGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCCATTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:1004445/140‑1 (MQ=18) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:2806715/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:3474641/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:1001461/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:2311502/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:334677/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:2436447/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:3840070/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:855124/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:794372/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:3768969/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:1431755/140‑1 (MQ=255) ccTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:4169798/139‑1 (MQ=255) tgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtgg < 1:578476/140‑1 (MQ=255) gcggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCgg < 1:1081925/140‑1 (MQ=255) cggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGc < 2:2926729/140‑1 (MQ=255) cgcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAt > 1:3823064/1‑140 (MQ=255) cgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAttt < 2:4794593/140‑1 (MQ=255) gAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAtttt > 1:4680087/1‑140 (MQ=255) tCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGcc < 1:2634513/140‑1 (MQ=255) tCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGcc > 2:4920044/1‑140 (MQ=255) gTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACt > 1:2953181/1‑140 (MQ=255) gTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACt > 2:378018/1‑140 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAAt < 2:1528118/110‑1 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAAt > 1:1528118/1‑110 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt > 1:4466855/1‑140 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt > 1:3948964/1‑140 (MQ=255) ccTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAC‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTc > 1:3738477/1‑140 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc > 1:2139045/1‑140 (MQ=255) aaaaCATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCa < 2:3355745/140‑1 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 1:725467/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 2:3411715/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 1:4789624/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 1:2009890/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 1:3991627/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 2:5083822/1‑140 (MQ=255) cAATAGACTCCAAGGTAATTGTATGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGCCGTTTGTCATCGTTCTCAGGCCGGGTGGGTAATACCACCCGGCCATTTTCATTTAAGCCACGTCCAACACTTCTTTTGTCGcct < 2:1184046/140‑3 (MQ=25) aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTc < 2:1699279/140‑1 (MQ=255) aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCAATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTc < 1:1307808/140‑1 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 1:890123/140‑1 (MQ=255) ttGCAATGCACTTGTATGCCTGATAAGCATAGCGCAT‑CA‑GACAATTTGGCGTTTGTCATCAGTCTCAGGCCGGCTGGGTGATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCAGTTCTTTTGTCGCTTTCACGcc < 2:4239120/140‑1 (MQ=38) ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑TAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGTTAATACCATCCGTCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGcc < 2:935497/140‑1 (MQ=38) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACGATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTCTTGTCTCTTTCACGccc > 1:421812/1‑140 (MQ=38) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 1:1166344/1‑140 (MQ=255) caTGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTCAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 2:3991445/139‑1 (MQ=255) aaTGCACTTGTAGGCCTGATAGGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATACGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 2:196285/140‑1 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 1:4922474/140‑1 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 2:4331944/140‑1 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTATTGTCGCTTTCACGCCCTGa < 2:3537265/140‑1 (MQ=255) aCTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCAt > 1:833328/1‑140 (MQ=255) cTTGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc > 2:2612208/1‑140 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTGACGCCCTGATGCATCa > 1:2880723/1‑140 (MQ=255) gTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAc > 2:3918438/1‑140 (MQ=255) gTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAc < 2:69441/140‑1 (MQ=255) gTAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTGCAGTTAAGCCACTTCCAGCAGTTCTTTTGTCGCCTTCACGCCCTGGCGCATCAAc > 1:428707/1‑140 (MQ=37) tAGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAca > 2:4214955/1‑140 (MQ=255) aGGCCTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcat < 1:1874350/140‑1 (MQ=255) acTGATAAGCGTAGCGCAG‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACAATAAGGCAATTATCATTTAAGCCACTTCCAGCACTTCTTTTGTAGCTTTCAAGACCTCATGCCTCAAcatcac > 2:1802627/2‑139 (MQ=25) cTGGTACGCGTAGCGCAT‑CAGG‑CAATTTGGCGTGTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAGCCGGCCATGGTCATTTAAGCCACGTCCAGCAGTTCTGTTGTCGCTTTCTCGCCCTGATGCATTAACATCGtt > 2:5008196/1‑140 (MQ=255) cTGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt < 1:5083822/140‑1 (MQ=255) tGATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTa < 1:2680128/140‑1 (MQ=255) taTAAGCGTAGCGCATCCG‑G‑CAATTTGGCCTTTGTCATCAGTCTCAGGCCCGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCTCGCCCTGATGCATCAACATCATTac < 2:1351850/139‑2 (MQ=39) gATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:3880498/1‑140 (MQ=255) gATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:1582077/1‑140 (MQ=255) gATAAGCGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:4745479/1‑140 (MQ=255) cGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 1:1384306/1‑140 (MQ=255) cGTAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 1:121421/1‑140 (MQ=255) tAGCGCAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCaa > 1:1256811/1‑140 (MQ=255) cgcAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGc > 2:555472/1‑132 (MQ=255) cgcAT‑CAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGc < 1:554889/132‑1 (MQ=255) | ACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCAT‑CA‑G‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014721‑3014991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |