| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,426,468 | +C | pseudogene (249/275 nt) | yjfY ← | DUF1471 family protein YjfY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,426,468 | 1 | . | C | 98.8% | 810.0 / 1.5 | 247 | pseudogene (249/275 nt) | yjfY | DUF1471 family protein YjfY |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (97/147); total (98/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 251 total aligned reads displayed.
TCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGT‑TAGCGATAAATATCCGCGCTGGCGT‑G‑ATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGC > NZ_CP025268/4426332‑4426601 | tccttcctCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑gcat > 1:1940247/1‑137 (MQ=255) cttcctCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGACCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑gcatat < 1:2059112/140‑6 (MQ=255) ggAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTa < 1:4747091/140‑1 (MQ=255) aCTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCg < 2:4426450/140‑1 (MQ=255) gTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAGAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTc > 1:1515442/1‑140 (MQ=255) gTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTc > 1:3670600/1‑140 (MQ=255) gTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTc > 1:3884733/1‑140 (MQ=255) gTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTc > 1:544019/1‑140 (MQ=255) gTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGGTc > 2:1856582/1‑140 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAGAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTcc < 1:3290348/140‑1 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTcc < 1:810357/140‑1 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTcc < 1:2410530/140‑1 (MQ=255) tCTAATTCCGAACGCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTcc < 1:1822430/140‑1 (MQ=255) tCTAACTCCGCGGCCGTTTTTCAAAAAAAGGACCCCAGCGAAGGGGGCAAAGCAAACTACGGCAATGTTTCGTTGGTTAT‑CCTTGTGTCGAGCGATGAAGATCCACCCTGGCGT‑GCATATTGCCGTTGCTCCCCGGttgg < 2:4666354/140‑3 (MQ=255) tAATTCCGCAGCCGTGTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCg < 1:3580764/140‑1 (MQ=255) aTTCCGCCGCCGTTTTTCACAAAAAAGCCCCCTGCGAAGGGGGCTAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTTGTGT‑TCGCGATAAATATCCGCGCTCGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCa < 2:3056367/140‑1 (MQ=255) aTTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAGAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCGCCGGTTCCCGCa > 1:4363157/1‑140 (MQ=255) aTTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCa > 1:1017561/1‑140 (MQ=255) aTTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCa > 1:5070897/1‑140 (MQ=255) aTTCCGAAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATCAATATCCGCGCTGGCGT‑GCATCTTGCCGTTACTCCCCGGTTCCCGCa < 2:2836775/140‑1 (MQ=255) ttCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCAt < 1:1652293/140‑1 (MQ=255) ttCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCAt < 2:389086/140‑1 (MQ=255) gCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCAt > 2:2978683/1‑136 (MQ=255) cAGCCGTTTTTCAAAAAAAAGCCCCCTGCGATGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGaa > 2:3894773/1‑140 (MQ=255) cAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGaa > 1:4257740/1‑140 (MQ=255) cAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGaa > 1:3326218/1‑140 (MQ=255) ccGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCCTCAGAATTa < 2:8957/140‑1 (MQ=255) ccGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTa < 1:2816057/140‑1 (MQ=255) ccGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTa < 2:3731015/140‑1 (MQ=255) ccGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTa < 2:859305/140‑1 (MQ=255) cGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTAc < 2:1550753/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:3008087/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:3903718/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:2618495/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:3151368/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:3963567/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:1221244/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:4404886/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:117580/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:4257740/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:313034/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:4981999/140‑1 (MQ=255) gTTTGTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:2575616/140‑1 (MQ=255) tttttCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGt < 2:4737315/140‑1 (MQ=255) tttttCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGt > 1:740290/1‑140 (MQ=255) tCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAATTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGgta < 1:5039942/140‑1 (MQ=255) tCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGgta < 1:288842/140‑1 (MQ=255) tGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAAGTACGTGGTAGTACGTTGCGCCTTgc < 1:1530110/140‑1 (MQ=255) gCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTgcg < 2:4804094/140‑1 (MQ=255) cGAAGGGGGCAAAGCAAACTAAGGCAATGTTTCGTTGGTTATACCTGATGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTCCTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTgcgc < 1:2950915/140‑1 (MQ=255) aaGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCAt < 2:1079797/140‑1 (MQ=255) gggCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGt < 1:2686642/140‑1 (MQ=255) ggCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGtt > 2:552397/1‑140 (MQ=255) ggCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGtt > 2:899845/1‑140 (MQ=255) aaagcaaaCTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTttct > 2:1367696/1‑140 (MQ=255) aagcaaaCTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTttctt < 1:4796941/140‑1 (MQ=255) aaCTGTAGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCAttt < 2:1112160/140‑1 (MQ=255) aaCTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCTGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCAttt < 2:3047513/140‑1 (MQ=255) aaCTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCAttt < 2:5112985/140‑1 (MQ=255) aaCTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCAttt < 2:2964005/140‑1 (MQ=255) aCTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTa > 1:4461942/1‑140 (MQ=255) aCTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGAGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTa > 2:769843/1‑140 (MQ=255) cTATGGCAATGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCGGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTaa > 2:4517704/1‑140 (MQ=255) tGTTTCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTgcg > 1:3892565/1‑105 (MQ=255) tttCGTTGGTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGTAC‑ATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTg > 1:2935548/1‑140 (MQ=255) gTTATACCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCtt > 2:462053/1‑140 (MQ=255) ttATCCCTGGTGC‑TAGAGATAAATCGCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTGCGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCGTCACTTAATGCCTGACGTGCTTCGCttt < 2:1708328/140‑1 (MQ=255) tataCCTGGTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTc > 1:3470542/1‑140 (MQ=255) taacTGGTGC‑TCGCGATAAATATCCGCCCTGGCGTCC‑ATATTGCCGCTACTCCCCGGTCCCCGCATCAGAATTCCGTGGTCGTACGTTGCGCCTTGCGCATCTGTTTCCTCATTTAATGCCTGACGCGCTTCGCTTTCAg < 2:4137791/137‑1 (MQ=255) ggTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCg < 1:1789296/140‑1 (MQ=255) ggTGC‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCg < 2:201926/140‑1 (MQ=255) gtgc‑TAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTTCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 2:3250907/1‑140 (MQ=255) gtgctAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 1:2585503/5‑140 (MQ=255) gtgctAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 2:3473335/5‑140 (MQ=255) gtgctAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 2:3273341/5‑140 (MQ=255) gtgctAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 1:1312513/5‑140 (MQ=255) tgctAGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGc > 2:1519308/4‑137 (MQ=255) aGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTa > 2:3799130/1‑140 (MQ=255) aGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTa > 2:717753/1‑140 (MQ=255) aGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTa > 2:1242661/1‑140 (MQ=255) aGCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTa > 2:2795199/1‑140 (MQ=255) gCGATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAt > 2:2130665/1‑140 (MQ=255) gATAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAtga < 1:749997/140‑1 (MQ=255) aTAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAtgat < 1:401873/140‑1 (MQ=255) aTAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAtgat < 1:113771/140‑1 (MQ=255) aTAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAtgat < 2:4069774/140‑1 (MQ=255) tAAATATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGGGAAATTAtgatt < 2:5051925/140‑1 (MQ=255) aaaTATCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAtgattg > 2:2370884/1‑140 (MQ=255) gtatCCGCGATGGCGTAC‑ATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAtgattgat < 2:492965/139‑1 (MQ=255) atatCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTAtgattgat < 1:1738667/140‑1 (MQ=255) tCCGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGAtata > 2:2285996/1‑140 (MQ=255) ccGCGCTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATaa > 1:4124835/1‑140 (MQ=255) gcgcTGGCGT‑GCATATTGCCGTTTCACCCCGGTTCCCGCATCAGAATTACGTGGTAGTCCGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGTCGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt < 2:141210/140‑1 (MQ=255) gcgcTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt < 2:3767265/140‑1 (MQ=255) gcgcTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt < 1:2642894/140‑1 (MQ=255) gcgcTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt < 1:1186013/140‑1 (MQ=255) gcgcTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt < 2:3400933/140‑1 (MQ=255) ccgcTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt < 1:2286698/139‑1 (MQ=255) cgcTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATc > 2:2592514/1‑140 (MQ=255) cgcTGGCGT‑GCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATc > 1:1035862/1‑140 (MQ=255) | TCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGT‑TAGCGATAAATATCCGCGCTGGCGT‑G‑ATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGC > NZ_CP025268/4426332‑4426601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |