BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	= 5601	233 (0.780)	31 (0.160) +CGCTGCGATTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCATTCAAC	5/180	9.3	21.6%	intergenic (+71/+82)	yaaX/yaaA	DUF2502 domain‑containing protein/peroxide stress protein YaaA
*	?	NZ_CP025268	2308958 =	113 (0.380)		5/180	9.3	21.6%	intergenic (+530/+185)	eco/mqo	serine protease inhibitor ecotin/malate dehydrogenase (quinone)
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 233 total aligned reads displayed.

CGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCA  >  NZ_CP025268/5463‑5740

cgcgCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGt                                                                                                                                            <  1:4913567/140‑1 (MQ=255)

cgcgCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGt                                                                                                                                            >  2:2214596/1‑140 (MQ=255)

 gcgcCACAATAAGAAAGATCCTCATGATAATCACGGCGGTCATGGTCCAGGCAAACATCCCCACTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCCGGCGCGTCTTATCAGGCCTACGtt                                                                                                                                           <  2:1636253/140‑1 (MQ=38)

   gcCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATTGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTaa                                                                                                                                         <  2:62326/140‑1 (MQ=255)

     ccccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAtt                                                                                                                                       <  2:287033/138‑1 (MQ=255)

     caccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAtt                                                                                                                                       <  2:2288361/140‑1 (MQ=255)

     caccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAtt                                                                                                                                       <  2:195377/140‑1 (MQ=255)

         aTACGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTCACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGc                                                                                                                                   <  2:1120689/140‑1 (MQ=255)

          tAAGAACGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACACCACCGCTAACTGACAAATGCAGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa                                                                                                                                  <  1:2678480/140‑1 (MQ=255)

          tAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTaa                                                                                                                                         <  2:2062831/133‑1 (MQ=255)

          tAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa                                                                                                                                  <  1:1978616/140‑1 (MQ=255)

          tAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTAAGTTAATTCTGCa                                                                                                                                  <  2:5059532/140‑1 (MQ=255)

           aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGTTGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa                                                                                                                                 <  2:4682530/140‑1 (MQ=255)

           aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa                                                                                                                                 <  1:3100174/140‑1 (MQ=255)

           aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa                                                                                                                                 <  2:4965247/140‑1 (MQ=255)

           aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa                                                                                                                                 <  2:1164104/140‑1 (MQ=255)

           aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa                                                                                                                                 <  2:97134/140‑1 (MQ=255)

           aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa                                                                                                                                 <  2:25975/140‑1 (MQ=255)

           aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTACCAGGCCTACGTTAATTCTGCaa                                                                                                                                 <  2:4937899/140‑1 (MQ=255)

                 gCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAtt                                                                                                                           >  2:3019428/1‑140 (MQ=255)

                  ctcctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGGTAAATGACAAATGCCGGGTAACAAACCGGCATTCAGCGCCTGATGCGACCCTGGCGCGTCTTATCAGGCCTACGTTAAGTCTGCAATATATTg                                                                                                                          >  2:4129102/1‑140 (MQ=255)

                  ctcctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg                                                                                                                          >  2:4828595/1‑140 (MQ=255)

                  ctcctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg                                                                                                                          >  2:121914/1‑140 (MQ=255)

                  ctcctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg                                                                                                                          >  2:3330934/1‑140 (MQ=255)

                  ctcctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg                                                                                                                          >  1:723413/1‑140 (MQ=255)

                  ctcctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCGAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCCACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg                                                                                                                          >  2:1099368/1‑140 (MQ=255)

                    cctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATCTATTgca                                                                                                                        >  2:2919893/1‑138 (MQ=255)

                     ctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAAt                                                                                                                       >  2:4186213/1‑140 (MQ=255)

                     ctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAAt                                                                                                                       >  2:5071527/1‑140 (MQ=255)

                       cATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCt                                                                                                                     >  2:1519066/1‑140 (MQ=255)

                          gATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCa                                                                                                                  <  1:4429440/140‑1 (MQ=255)

                            tcatcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATg                                                                                                                >  1:32787/1‑140 (MQ=255)

                             catcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGc                                                                                                               >  1:1066901/1‑140 (MQ=255)

                               tcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCtt                                                                                                             >  2:3623252/1‑140 (MQ=255)

                                      ggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAgg                                                                                                      <  1:488378/140‑1 (MQ=255)

                                      ggTCATGGTCCAGGCAAACATCACCGCGAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAgg                                                                                                      <  2:3938000/140‑1 (MQ=255)

                                       gTCATGGTCCAGGCAAACATCACCGCTCACTGACAAATGCCGGGTAACAATCCGGCATTCCGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGc                                                                                                     >  2:5114838/1‑140 (MQ=255)

                                       gTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGa                                                                                                                         >  1:5067538/1‑120 (MQ=255)

                                       gTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGc                                                                                                     <  1:3791556/140‑1 (MQ=255)

                                          aTGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAgg                                                                                                  >  1:3532539/1‑140 (MQ=255)

                                          aTGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAgg                                                                                                  >  2:3191050/1‑140 (MQ=255)

                                             gTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGTCAGGATa                                                                                               >  1:2278536/1‑140 (MQ=255)

                                                cAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAgg                                                                                            <  2:1589264/140‑1 (MQ=255)

                                                  ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCg                                                                                          >  2:4615132/1‑140 (MQ=255)

                                                  ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTCCAATATATTGAATCTGCATGCTTTTCTAGGCACGATAAGGCg                                                                                          >  1:3630354/1‑140 (MQ=255)

                                                  ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAGTGAATCGGCATGCTTTTGTAGGCAGGGGAAGGCg                                                                                          >  2:4034490/1‑140 (MQ=38)

                                                       aCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAc                                                                                     >  1:786869/1‑140 (MQ=255)

                                                       aCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAc                                                                                     >  1:1451654/1‑140 (MQ=255)

                                                        cATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcg                                                                                    <  1:4131703/140‑1 (MQ=255)

                                                        cATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcg                                                                                    >  1:2923228/1‑140 (MQ=255)

                                                        cATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcg                                                                                    >  2:1864064/1‑140 (MQ=255)

                                                        cATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcg                                                                                    >  2:1637928/1‑140 (MQ=255)

                                                        cATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcg                                                                                    >  1:856620/1‑140 (MQ=255)

                                                        cATCACCGCTAAATGACAAATGCCGGGTAACAATACGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCGACGTTAATTCTGCAATATATTGAATCTGCATGCTTGTGTAGGCAGGATAAGGCGTTCAcg                                                                                    >  2:1879183/1‑140 (MQ=255)

                                                          tCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcgcc                                                                                  <  1:3427492/140‑1 (MQ=255)

                                                            aCCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcgccgc                                                                                >  2:4083617/1‑140 (MQ=255)

                                                             ccGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCa                                                                               >  1:3111402/1‑140 (MQ=255)

                                                             ccGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCa                                                                               >  1:4779585/1‑140 (MQ=255)

                                                              cGCTAAATGACAAATGCCGGGTAACGATCCGGCATTCAGCGCCCGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCAt                                                                              <  1:4661030/140‑1 (MQ=255)

                                                                   aaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGCCGCTGGCGTGTCTTATGAGGCCTACGTTAATTCTGCTATATATTTAATCTGCATGCTTTTGTAGGCAGGATAAGGGGTTCCTGCCGCATctgct                                                                         >  2:1809174/1‑136 (MQ=37)

                                                                   aaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGc                                                                         >  1:2191007/1‑140 (MQ=255)

                                                                      gACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt                                                                      <  2:4470038/140‑1 (MQ=255)

                                                                        cAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGa                                                                    >  2:2513909/1‑140 (MQ=255)

                                                                            tGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATGAGGCGTTCACGCCGCATCCGGCATTGACTGc                                                                <  2:3887908/140‑1 (MQ=255)

                                                                            tGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGc                                                                <  1:2933241/140‑1 (MQ=255)

                                                                            tGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGc                                                                <  2:2889599/140‑1 (MQ=255)

                                                                            tGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGc                                                                <  1:1608350/140‑1 (MQ=255)

                                                                                 ggTAACACTCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGGCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATTCTTTTGTAGGCAGGGCTACGCGCTCCCGCCGCATCCGGCATTGCCTGCCAACt                                                           >  2:1761388/1‑140 (MQ=25)

                                                                                 ggTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACt                                                           >  1:2455857/1‑140 (MQ=255)

                                                                                      cAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACg                                                      <  1:2592313/140‑1 (MQ=255)

                                                                                      cAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACg                                                      <  2:3070921/140‑1 (MQ=255)

                                                                                      cAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACg                                                      <  1:1701783/140‑1 (MQ=255)

                                                                                      cAATCCGGCATTCAGCGCCTGATGCAACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCGTCAGGCATTGACTGCAAACTTAACg                                                      <  2:3070904/140‑1 (MQ=255)

                                                                                           cGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctgct                                                 >  1:3841106/1‑140 (MQ=255)

                                                                                            ggCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAAGCCTACGTTAATTCTGCAATAGATTGAATCTGCATGCTTTTGTAGGCGGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTc                                                >  1:1260183/1‑140 (MQ=255)

                                                                                             gCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCg                                               <  1:4419556/140‑1 (MQ=255)

                                                                                              cATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGt                                              <  2:4364593/140‑1 (MQ=255)

                                                                                                ttCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAg                                            <  1:4093198/140‑1 (MQ=255)

                                                                                                 tCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGc                                           <  1:2217294/140‑1 (MQ=255)

                                                                                                   aGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGt                                         >  2:1333975/1‑140 (MQ=255)

                                                                                                          gATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGCTAAGGCGTTCACGCCGCATCCGGCCTTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAaca                                  >  1:312569/1‑140 (MQ=255)

                                                                                                           aTGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAacac                                 >  2:2462296/1‑140 (MQ=255)

                                                                                                               gACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGATGCTTGTAGCGTTTAAACACCAGt                             >  2:3559444/1‑140 (MQ=255)

                                                                                                                  gCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCACTATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCg                          >  1:1915839/1‑140 (MQ=255)

                                                                                                                   cTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGc                         <  2:1692926/140‑1 (MQ=255)

                                                                                                                   cTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGc                         <  1:344808/140‑1 (MQ=255)

                                                                                                                    tGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGcc                        <  1:2036868/140‑1 (MQ=255)

                                                                                                                             ttATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTgga               >  1:1132347/1‑140 (MQ=255)

                                                                                                                                tCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTggagga            <  2:723413/140‑1 (MQ=255)

                                                                                                                                    gCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCt        >  2:4374500/1‑140 (MQ=255)

                                                                                                                                    gCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCt        >  2:3320015/1‑140 (MQ=255)

                                                                                                                                      cTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGGTGGAGGAATCTtc      >  1:4495795/1‑140 (MQ=255)

                                                                                                                                      cTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtc      >  1:2867473/1‑140 (MQ=255)

                                                                                                                                         cGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcatc   >  2:521727/1‑140 (MQ=255)

                                                                                                                                          gTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcatca  <  1:2486965/140‑1 (MQ=255)

                                                                                                                                          gTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcatca  <  1:2717656/140‑1 (MQ=255)

                                                                                                                                          gTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcatca  <  1:4226510/140‑1 (MQ=255)

                                                                                                                                          gTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcatca  <  1:4503357/140‑1 (MQ=255)

                                                                                                                                          gTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACGGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcatca  <  2:3653893/140‑1 (MQ=255)

                                                                                                                                          gTTAATTCTGCAATATATCGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTCACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGCATCTtcatca  <  1:111573/140‑1 (MQ=255)

CGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCA  >  NZ_CP025268/5463‑5740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.