| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 1,762,571 | +CTGGT | pseudogene (969/1000 nt) | ldtE ← | L,D‑transpeptidase LdtE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 1762570 | 2 (0.010) | 283 (0.990) +TCTGG |
100/264 | 0.1 | 99.2% | pseudogene (970/1000 nt) | ldtE | L,D‑transpeptidase LdtE |
| ? | NZ_CP025268 | 1762571 = | 3 (0.010) | pseudogene (969/1000 nt) | ldtE | L,D‑transpeptidase LdtE | |||||
Only 100 of 298 total aligned reads displayed.
GCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTTTA > NZ_CP025268/1762432‑1762709 | gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt < 1:167022‑M1/140‑2 (MQ=255)gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt > 1:3624917‑M1/1‑139 (MQ=255) aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAAGCGTAACATATTCCCTTGCtctg < 2:1828809‑M1/140‑5 (MQ=255) cAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggtt < 2:3814350‑M1/140‑8 (MQ=255) gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca < 2:1534826‑M1/140‑10 (MQ=255) cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac > 1:4900004‑M1/1‑130 (MQ=255) cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac > 1:690429‑M1/1‑130 (MQ=255) cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac > 1:2421628‑M1/1‑130 (MQ=255) cTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCCCTTGCtctgtttcaccat > 1:605223‑M1/1‑127 (MQ=255) tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccatt < 2:1933484‑M1/140‑15 (MQ=255) ggACAACATGGCTACTAAATTCCGCAAGTAATGGTACCTGTGAAGTGATAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattc < 1:1907484‑M1/140‑16 (MQ=255) aacaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGCAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcg < 1:2000373‑M1/140‑20 (MQ=255) acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc < 1:4567748‑M1/140‑21 (MQ=255) acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc < 2:2461345‑M1/140‑21 (MQ=255) acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc < 1:1010908‑M1/140‑21 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct > 2:1180803‑M1/1‑119 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct < 1:4978570‑M1/140‑22 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct > 1:3178620‑M1/1‑119 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct > 2:3464065‑M1/1‑119 (MQ=255) ctactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactc > 1:470789‑M1/1‑114 (MQ=255) ctaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctac > 1:1582414‑M1/1‑111 (MQ=255) aaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgctctgactctactga > 2:4940371‑M1/1‑108 (MQ=255) ccGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCCTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggc > 2:648083‑M1/1‑104 (MQ=255) ccGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggc < 2:1580504‑M1/140‑37 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca > 1:3443284‑M1/1‑101 (MQ=255) aaGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcat > 1:1256628‑M1/1‑100 (MQ=255) gTAATAGTACCTGTGAAGTGTAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattg > 2:3536121‑M1/1‑98 (MQ=255) aaTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgct > 1:2374200‑M1/1‑96 (MQ=255) ccTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcg > 2:2138477‑M1/1‑89 (MQ=255) cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg > 1:735812‑M1/1‑88 (MQ=255) cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg > 2:2985687‑M1/1‑88 (MQ=255) tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg < 1:289964‑M1/140‑54 (MQ=255) tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcatggctggctgcggg > 2:565353‑M1/1‑87 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctcctgaaggcgcattgctggctgcggga > 1:3410061‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 1:3876553‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 1:4191701‑M1/1‑86 (MQ=255) gtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc > 2:2704509‑M1/1‑81 (MQ=255) tgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagtttct > 2:360454‑M1/1‑80 (MQ=255) tgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgct > 1:923257‑M1/1‑80 (MQ=255) tgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgct > 1:3780227‑M1/1‑80 (MQ=255) aaaaaTGGCGGCCATTGTGCGCCATTTTTTTTGTCTGCCGTTTACGGCTACTTCGACACCCGTAGCATATTCCCTTGCtctggttctccattcttcgctgactctactgaaggcgcattgctggctgcggcagttgctcc > 2:2875208‑M1/1‑78 (MQ=255) aaaaaTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcc > 2:2255021‑M1/1‑78 (MQ=255) aaaaTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCCCGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcca < 2:1715879‑M1/140‑64 (MQ=255) aaTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg > 1:2127451‑M1/1‑75 (MQ=255) ggCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgct < 2:2615683‑M1/140‑69 (MQ=255) caTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccga < 2:1434609‑M1/140‑75 (MQ=255) aTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCTCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa < 1:4075456‑M1/140‑76 (MQ=255) aTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa < 1:4260000‑M1/140‑76 (MQ=255) aTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa < 1:3714876‑M1/140‑76 (MQ=255) aTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa < 1:2977348‑M1/140‑76 (MQ=255) tgCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg > 2:3117419‑M1/1‑61 (MQ=255) tgCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg > 2:2587507‑M1/1‑61 (MQ=255) tgCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg < 2:478437‑M1/140‑80 (MQ=255) gcgcCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccgg > 1:2704544‑M1/1‑60 (MQ=255) cgcCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcca < 2:1477157‑M1/122‑64 (MQ=255) ccATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggata < 1:4385895‑M1/140‑84 (MQ=255) aTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgacaccggatacc > 1:1401182‑M1/1‑55 (MQ=255) ttttttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccc < 1:3965293‑M1/140‑87 (MQ=255) tttGTCTCCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCgctggttcaccattctgcgctgtctctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggatacactgccc < 2:4863880‑M1/140‑92 (MQ=255) tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactgtactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga < 2:4551664‑M1/140‑94 (MQ=255) gCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgata < 1:4438147‑M1/140‑99 (MQ=255) ccGTTTACTGATACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgctggagttgctccactgctcactgaaaccggataccctgcccgacgatac < 2:3736539‑M1/140‑100 (MQ=255) ccGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatac < 2:866955‑M1/140‑100 (MQ=255) ctaCTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttat > 2:1650671‑M1/2‑31 (MQ=255) ctaCTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttat > 2:4163610‑M1/2‑31 (MQ=255) ctaCTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttat < 1:3759591‑M1/139‑110 (MQ=255) ctaCTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgagctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttat < 2:3196831‑M1/139‑110 (MQ=255) cTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcga < 2:4400087‑M1/140‑113 (MQ=255) cTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcga > 2:612845‑M1/1‑28 (MQ=255) gCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaatgctttatcgact < 2:3075571‑M1/140‑115 (MQ=255) cGTCACGCGTAACATATTCCCTTGCtcttgttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagatgctccactgctcaccgaaaccggatatcctgcccgacgatacaacgctttatcgacta > 1:283367‑M1/1‑25 (MQ=255) cGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacgacgctttatcgacta > 2:4074302‑M1/1‑25 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 1:1782967‑M1/1‑20 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctacactgctcaccgaaaccggataccctgcccgacgatacaacggtttatcgactaacttc > 1:2821363‑M1/1‑20 (MQ=255) cgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctg > 1:3527117‑M1/1‑18 (MQ=255) cATATTCCCTTGCtctggttcaccattctgcgctgcctctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 1:3361421‑M1/140‑128 (MQ=255) cATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 1:4774793‑M1/140‑128 (MQ=255) cATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 1:1586720‑M1/140‑128 (MQ=255) cATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctcgctgcgggagttgctccactgctcaccgaagccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 1:826598‑M1/140‑128 (MQ=255) tatTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctaca < 1:5074619‑M1/140‑130 (MQ=255) ttCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagc > 2:4385898‑M1/1‑9 (MQ=255) ttCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgatcaccgaaaccggataccctgcccgacgagacaacgctttatcgactaacttctgatcgacagc > 2:4488746‑M1/1‑9 (MQ=255) ttCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgcgagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagc > 2:277277‑M1/1‑9 (MQ=255) cccTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagcct > 1:2533179‑M1/1‑7 (MQ=255) cTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagcctta > 2:3630533‑M1/1‑5 (MQ=255) cTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagcctta > 2:748839‑M1/1‑5 (MQ=255) ttGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 2:2303227‑M1/140‑137 (MQ=255) ttGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 1:1327800‑M1/140‑137 (MQ=255) ttGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 1:414002‑M1/140‑137 (MQ=255) ttGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 2:3443284‑M1/140‑137 (MQ=255) ttGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 1:986820‑M1/140‑137 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:4146964‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:3983618‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:2623402‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:5044661‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:147954‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta > 1:493625‑M1/1‑3 (MQ=255) ctctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggcgttgccccactgctcaccgaaaccggataccctgcccgacgatccatcgcgttatcgactaacttcttatctacagcctcattgc > 2:1145893‑M1/1‑1 (MQ=255) ctctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttattgt > 2:3803458‑M1/1‑1 (MQ=255) cTTCACCTTTCTGCGCTGACTCTACTTAAGGCGGATTGCTGGCCGCGGGAGTTGCTCCACTGCTCACCGACACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAATTTCTGATCTACTGCCTTATTGCCTTTa > 2:1346121/1‑140 (MQ=255) | GCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTTTA > NZ_CP025268/1762432‑1762709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |