| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 2,618,640 | +TCC | coding (680/846 nt) | focB → | formate transporter FocB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 2618638 | 10 (0.030) | 235 (0.810) +CCT |
84/266 | 0.3 | 96.0% | coding (678/846 nt) | focB | formate transporter FocB |
| ? | NZ_CP025268 | 2618639 = | 10 (0.030) | coding (679/846 nt) | focB | formate transporter FocB | |||||
Only 100 of 249 total aligned reads displayed.
GAGTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CC‑‑‑C‑‑‑CCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGT > NZ_CP025268/2618500‑2618767 | gAGTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCc > 2:16916‑M1/1‑139 (MQ=255)gAGTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCc < 1:546256‑M1/140‑2 (MQ=255)gAGTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCc < 1:426863‑M1/140‑2 (MQ=255) ttATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctc > 1:100399‑M1/1‑136 (MQ=255) ttATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctc > 2:2433639‑M1/1‑136 (MQ=255) tATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctcc < 1:4826084‑M1/140‑6 (MQ=255) tATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctcc < 1:1930061‑M1/140‑6 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccc > 2:4401029‑M1/1‑134 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccc > 1:4203421‑M1/1‑134 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccc > 2:3567732‑M1/1‑134 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccc > 1:4395387‑M1/1‑134 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CAcctccc > 2:3778283‑M1/1‑134 (MQ=255) tGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccc < 2:3972032‑M1/140‑9 (MQ=255) tGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCAACACCCCGTTTGTCGCCGGTGGCTTTGAGCACTGTATCGCCAATTAGTTTGTGCTTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccc > 2:2419652‑M1/1‑132 (MQ=255) ggCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttc > 2:1601028‑M1/1‑128 (MQ=255) cgttcgttATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctg > 2:2757594‑M1/1‑126 (MQ=255) ttcgttATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggc < 2:3008734‑M1/140‑17 (MQ=255) tcgttATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggca > 2:4285362‑M1/1‑123 (MQ=255) gttATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagc < 2:2881765‑M1/140‑20 (MQ=255) gttATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTATTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCAGTTCGCCACTGCCATTCGCCATTTCG‑‑‑ACcctccccccttctggcagc < 2:1557258‑M1/140‑20 (MQ=255) tATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctg < 1:49379‑M1/140‑22 (MQ=255) gCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGGACTGTATCGCCAATTTGTTTGTGATTCCGTCCGCCATTGCCATTCGCCAGTTCG‑‑‑CCcctcccccctgctggcagctggcg < 2:3479894‑M1/140‑25 (MQ=255) gCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcg < 1:82493‑M1/140‑25 (MQ=255) gCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcg < 1:3164858‑M1/140‑25 (MQ=255) gCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcg < 1:1643757‑M1/140‑25 (MQ=255) aCAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcac > 1:4623760‑M1/1‑113 (MQ=255) aCAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcg < 1:3579636‑M1/137‑25 (MQ=255) aaTCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagta > 2:479219‑M1/1‑109 (MQ=255) tcgtcgCCATGATTTTGCCCATCACCCTGTTTGGCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagc > 1:733793‑M1/1‑107 (MQ=255) gtcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgc < 1:3607951‑M1/140‑36 (MQ=255) aTGATTTTGCCCATCACCCTGTTTGTCGCCCGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑ACcctccccccttctggcagctggcgcacagtagcgcagacaa < 1:1435615‑M1/140‑42 (MQ=255) aTGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaa < 2:39294‑M1/140‑42 (MQ=255) ttGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttcc < 2:2072862‑M1/140‑48 (MQ=255) cACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactga > 1:3786392‑M1/1‑85 (MQ=255) aCCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATCTGTTTGTGATTCCGTTCGCCACTGGCATTCGCCATTTCG‑‑‑CCcctctccccttctggcagctggcgcacagaagtgcagacaattttccggcactgac < 1:3062245‑M1/140‑57 (MQ=255) cTGTTTGTCGCCGGTGGGTTTGAGCACTGTATCGTCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCAGTTCG‑‑‑CCtctccccccttctggcagctggcgcacagtagcgcaaacaattttccggccctgacggt < 2:1200542‑M1/140‑60 (MQ=255) cTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggt < 2:1350587‑M1/140‑60 (MQ=255) cTGTTCGCCGCCCGTCGCTTGCGGCACTGTTGCGCAAATTCGTTTGTGAGTCCGTTCGCCATTGCCATACGCCATTTCG‑‑‑CCCAGC‑‑‑CCCCCTGCTGGCACCAGGCCCACAGGAGCGCAAACAATTCGGCGGCAGTGagtgt < 2:186289/140‑5 (MQ=255) ttGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc < 1:140092‑M1/140‑64 (MQ=255) ttGTCGCCAGTGGCCTTGAGCACTGTACCGCCAATTTGTTTGTGATTCCGGACGCCATTGCCATTCCCCAGTTCG‑‑‑CCCCTC‑‑‑CCCCCTTCTGGCACCGAGCGCCCAGAAGCGCAGACAATGTTCCCGCACTGACGGCCAGc > 2:773659/1‑140 (MQ=255) tGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagcc > 2:1723119‑M1/1‑76 (MQ=255) cGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccatt > 2:881154‑M1/1‑73 (MQ=255) cGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccatt > 1:3484412‑M1/1‑73 (MQ=255) gCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattt > 1:2488184‑M1/1‑72 (MQ=255) gCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctg < 1:2612954‑M1/93‑22 (MQ=255) gTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttatt > 1:981494‑M1/1‑68 (MQ=255) gTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc > 2:1954961‑M1/1‑68 (MQ=255) cTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccg > 1:3305829‑M1/1‑64 (MQ=255) tGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgcca > 1:3514212‑M1/1‑61 (MQ=255) gAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaa > 1:2987777‑M1/1‑60 (MQ=255) aGCACTGTCTAGCCAATTTGTTTTGGATTCCGTTCGCAATTGCCATCAGCGATTTGG‑‑‑CC‑‑‑CCTGCCCCCTTCTGGCAGCGGGCGCACGGTGGCGCAGACAATTTTCCGGTACTGACGGTCAGCCATTTTATTACCGCCAAt < 2:4064043/140‑1 (MQ=255) cTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgc > 2:566278‑M1/1‑55 (MQ=255) tGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgct < 1:4401029‑M1/140‑87 (MQ=255) tGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgct < 1:2047174‑M1/140‑87 (MQ=255) gTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctc > 2:4956114‑M1/1‑53 (MQ=255) gTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacgggcagccattttattaccgccaatctgctc > 1:3696378‑M1/1‑53 (MQ=255) tATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcc < 2:4750476‑M1/140‑89 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccgg > 1:1822703‑M1/1‑49 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggagcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccgg > 2:4718698‑M1/1‑49 (MQ=255) cccagttgtttgtGACTCCGTTCGCCATTGCCATGCGCCATGTGGGC‑CCT‑‑C‑‑‑CCCCCGTTTGGCAGCTGGCGCACAGTTTCGCGGACTATTGTCCGGCACTGACGGTCAGCCATTTTATTACCGCCACTCTGCTCCCGGTg < 2:3601971/135‑1 (MQ=255) ccAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtg > 2:5022619‑M1/1‑47 (MQ=255) ccAATTGGTTTGTGATTCCGTTCGCGATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggccgcgggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtg < 2:2631470‑M1/140‑94 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatg > 2:1030667‑M1/1‑44 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatg < 1:1502227‑M1/140‑97 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatg < 1:4178765‑M1/140‑97 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaatttgccgccactgacggtcagccattttattaccgccaatctgctcccggtgatg < 2:5098884‑M1/140‑97 (MQ=255) tgtgATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggta < 1:2265811‑M1/140‑104 (MQ=255) tgtgATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggta < 2:1867021‑M1/140‑104 (MQ=255) tgtgATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggta < 1:3975236‑M1/140‑104 (MQ=255) cGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CCCTTC‑‑‑CCCCCTTCTGGCTTCTGGCGCACAGTAGCGCAGACAATTTTCCGTCACTGACGGTCAGCCATTTTATTCCCGCCAATCGGCTCCTTGTGATGCTGGGTAAGATTATc > 1:510279/1‑140 (MQ=255) ttccgccttgccaccCGCCATTTCGCCCCC‑‑‑C‑‑‑CCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACCATCTTCCGGCACCGCCGGTCCGCCAATTTATTCCCGCCAAACCGCTCCCGGTGCTGCTGGGTAATATCATcgg < 2:1405507/133‑1 (MQ=255) ttCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgctgacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcgg < 2:4519266‑M1/140‑114 (MQ=255) ttCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcgg < 2:4831346‑M1/140‑114 (MQ=255) ttCGCCATTGCCATTCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcgg < 1:4732594‑M1/140‑114 (MQ=255) ttCGCCATTGCCATTCGCCACTTCA‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgactgtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcgg < 2:2540402‑M1/140‑114 (MQ=255) cattgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 1:1173791‑M1/140‑119 (MQ=255) cattgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 1:4726880‑M1/140‑119 (MQ=255) cattgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 1:5090284‑M1/140‑119 (MQ=255) cattgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 1:762686‑M1/140‑119 (MQ=255) cattgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 1:3759233‑M1/140‑119 (MQ=255) cattgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcgggg < 2:4092591‑M1/140‑119 (MQ=255) cattgccattCGCAATTGCG‑‑‑CAactcgccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccatgttcttaccgccaatctgatccaggtgatgctgggtaatattatcggcggtg < 2:4212770‑M1/140‑119 (MQ=255) ttgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcg < 1:4326888‑M1/140‑121 (MQ=255) ttgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcg < 1:3460481‑M1/140‑121 (MQ=255) tgccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcgg > 1:2455770‑M1/1‑19 (MQ=255) gccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggggcggt > 1:4533611‑M1/1‑18 (MQ=255) ccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtg < 1:1723119‑M1/140‑124 (MQ=255) ccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtg < 1:911672‑M1/140‑124 (MQ=255) ccattCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtg < 1:1178900‑M1/140‑124 (MQ=255) ttCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctg < 1:3309881‑M1/140‑127 (MQ=255) ttCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagcagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctg < 2:2926229‑M1/140‑127 (MQ=255) tCGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctgg < 1:138626‑M1/140‑128 (MQ=255) cGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggt < 1:2801309‑M1/140‑129 (MQ=255) cGCCATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggt < 1:2343775‑M1/140‑129 (MQ=255) cATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgag > 1:3880559‑M1/1‑9 (MQ=255) cATTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgag > 1:2688316‑M1/1‑9 (MQ=255) aTTTCG‑‑‑CCcctccgcccttctggcagctggcgcacagtagcgcagccaattttccggcactgacggtcagccattttattaccgtcaatctgctcccggtgatcctgggtaatattatcggcggtgcggtgctggtgagt < 2:4423604‑M1/140‑133 (MQ=255) aTTTCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggggatgctgggtaatattatcggcggtgcggtgctggtgagt < 2:1121390‑M1/140‑133 (MQ=255) aTTTCG‑‑‑CCcccccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgagt < 1:1975842‑M1/140‑133 (MQ=255) tCG‑‑‑CCcctccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgagtatg < 2:4557909‑M1/140‑136 (MQ=255) | GAGTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑‑‑CC‑‑‑C‑‑‑CCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGT > NZ_CP025268/2618500‑2618767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |