| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 7 (0.020) | 307 (1.050) +GCC |
96/270 | 0.2 | 97.8% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 7 (0.020) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 330 total aligned reads displayed.
AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGA‑CCT‑CCG‑CC‑ATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGT > NZ_CP025268/3864306‑3864573 | aGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGtt < 1:5060540/140‑1 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcc > 1:1758043‑M1/1‑137 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcc > 2:2807278‑M1/1‑137 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgccca < 1:1627288‑M1/140‑6 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgccca < 1:3716587‑M1/140‑6 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGAATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgccca < 2:3845426‑M1/140‑6 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTCGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgccca < 2:4092235‑M1/140‑6 (MQ=255) gAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccacca < 2:2991632‑M1/140‑9 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacac < 1:3977572‑M1/140‑12 (MQ=255) aCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacacc > 1:1598880‑M1/1‑128 (MQ=255) aCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTGGTGCGGTAAAACCGAGTCAATGAGA‑CCT‑CCGCCC‑ATGTTgcccaccacacc > 1:3242002‑M1/1‑128 (MQ=255) ccACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATACCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacacca < 1:3644178‑M1/140‑14 (MQ=255) cACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaa > 1:3839617‑M1/1‑126 (MQ=255) aCGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaa < 1:4952143‑M1/140‑16 (MQ=255) cGAAGTCCAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaag < 2:1128287‑M1/140‑17 (MQ=255) gAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaaga > 2:83721‑M1/1‑123 (MQ=255) aaGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑CTGTTgcccaccacaccaaagag < 1:3894233‑M1/140‑19 (MQ=255) aaGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagag < 2:1180847‑M1/140‑19 (MQ=255) agGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattac < 1:1444062‑M1/140‑28 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacgg > 1:2880980‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacgg > 2:3190394‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacgg > 2:129371‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacgg > 2:4612688‑M1/1‑111 (MQ=255) gTAAAGCCCAACCCACTGGCGATTTGGGTCAGCTTCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTCGTCAATCAGA‑CTT‑CCGCCC‑ATGTTgcccaccacaccacagagatacattacggt < 2:650635‑M1/140‑31 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccagaccaaagagatacattacggtc > 2:3838396‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc < 2:1562420‑M1/140‑32 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc < 2:4141372‑M1/140‑32 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc > 1:2446644‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc > 2:766401‑M1/1‑109 (MQ=255) tAAACCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTGGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtc > 2:4707275‑M1/1‑109 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgac > 2:1814236‑M1/1‑106 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgac > 1:172631‑M1/1‑106 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTCGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgac > 2:4307965‑M1/1‑106 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACAGCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgac > 1:1013867‑M1/1‑106 (MQ=255) cacaACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacacccaagagatacattacggtcgacat > 2:3017280‑M1/1‑104 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacatttg > 2:3277223‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattga > 1:211299‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattga > 1:77539‑M1/1‑101 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGCTCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑GTGTTgcccaccacaccaaagagatacattacggtcgacattgag > 2:3055918‑M1/1‑100 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:2583822‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:1045936‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 1:1859048‑M1/140‑41 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgagg > 2:2345327‑M1/1‑99 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccacca > 1:1375784‑M1/1‑99 (MQ=255) aaTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccg < 2:2226468‑M1/140‑45 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgcc > 1:3772051‑M1/1‑94 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgcc > 2:1408577‑M1/1‑94 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:3556952‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:340968‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:3339288‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:79144‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:2076429‑M1/140‑50 (MQ=255) gATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagca < 1:4422745‑M1/140‑51 (MQ=255) aTTTGGGTCAGCATCATCTCCGCGTGGTTGCTGAACATCGGGATTCCGTTTTGCGGTAACACCTCGTCAATCAGACCCC‑CCC‑CC‑ATGTTgcccaccacaccaaagggatacattacggtcgacattgaggccgccagcac > 2:2170153‑M1/1‑89 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 1:4861883‑M1/1‑89 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 1:612792‑M1/1‑89 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCCGTAAAACCCAGTCAAGCAGA‑CCTCCCC‑CC‑ATGGTGCCCACAACACACAAGAGACACATTACGGTCGACATTGAGGCAGCCAGGAc > 2:1191782/1‑140 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 1:1908200‑M1/140‑53 (MQ=255) tGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggc < 1:4717180‑M1/140‑55 (MQ=255) tGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggc < 1:2150630‑M1/140‑55 (MQ=255) gCATCATATCCGCGTGGTTGCTGAACATCGGGATACAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtacc < 1:945531‑M1/140‑62 (MQ=255) tcatATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgca < 2:4254847‑M1/140‑65 (MQ=255) atatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaa < 1:4076180‑M1/140‑67 (MQ=255) atatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccac < 1:4217258‑M1/80‑7 (MQ=255) tatCCGCGTGGTTGCTGAACATCGGGAGCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccatcactgcgggtaccgcaatt > 2:3910476‑M1/1‑73 (MQ=255) tatCCGCGTGGTTGCTGAACATCGGGAGCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtgccgcaaac > 2:3751419‑M1/1‑73 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:4798768‑M1/1‑68 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa < 1:3037757‑M1/140‑73 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGGAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:4974939‑M1/1‑68 (MQ=255) cgTGGTTGCTGAACAACGAGATCCAGTTTTGCGGTAAACGCTAGCCAATCAAA‑CCC‑CCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTTGACATTCAGGCCCCCCGCGCGGCGTGTACCTCAAACACCAAc > 2:4732277/1‑140 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGCTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcacacagcaacg > 1:3513471‑M1/1‑66 (MQ=255) tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacgg > 1:2022469‑M1/1‑65 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 2:2942366‑M1/1‑63 (MQ=255) tGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaa < 1:882316‑M1/140‑80 (MQ=255) gCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaa > 2:4873870‑M1/1‑60 (MQ=255) tGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatg < 2:660990‑M1/140‑83 (MQ=255) aaCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaa < 1:3338818‑M1/140‑85 (MQ=255) tCGTGATCCATTTTTGCGGTAAACTCTAGTCAATCGGA‑CCT‑CCG‑CCTATGTTGCCCACCTCACCAAAGAGATACATTACGGTCGACAGTGAGGCCGCCAGCACGGCGAGTACCGCAAACAGCAAGGGTGAAGTGAACAgg > 2:4229331/1‑140 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg < 2:2510566‑M1/140‑89 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 1:3430478‑M1/1‑52 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 2:4499538‑M1/1‑52 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 2:2623038‑M1/1‑52 (MQ=255) cGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagga < 2:481387‑M1/140‑90 (MQ=255) tCCAGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggta < 1:271770‑M1/140‑95 (MQ=255) aGTTTTGCGGTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaat > 2:1247566‑M1/1‑43 (MQ=255) ggTAAAACCTAGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg < 1:3118255‑M1/140‑106 (MQ=255) aacctagtcAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcgg < 1:2338291‑M1/136‑111 (MQ=255) ctAGTCAATCAGA‑CCT‑CCGCCC‑ATATTGCCCACCACACCAAAGAGATACATCACGTCCGACATTGAGGCCGCCAGCACAGCGTGTCCCGCAAACAGCCCCGGTGAAATGAACCGGAAGGTAAATTCCAGCGGTTCGGTaa < 2:1337286/139‑1 (MQ=255) aGTCAATCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaatt < 1:4286012‑M1/140‑116 (MQ=255) tCAGA‑CCT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccacc > 2:5022095‑M1/1‑19 (MQ=255) ccT‑CCGCCC‑ATGTTgcccaccacaccaacgagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcat < 1:3369748‑M1/140‑127 (MQ=255) ccT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgccaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcat < 1:2695797‑M1/140‑127 (MQ=255) ccT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcat > 1:3613562‑M1/1‑14 (MQ=255) cT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:83721‑M1/140‑128 (MQ=255) cT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:1079992‑M1/140‑128 (MQ=255) cT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:4931443‑M1/140‑128 (MQ=255) cT‑CCGCCC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:2528630‑M1/140‑128 (MQ=255) cT‑CCGCCC‑ATGTTgcccaccacacaaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:1188633‑M1/140‑128 (MQ=255) ccgccc‑atgtTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggc > 2:3824979‑M1/5‑11 (MQ=255) ccc‑aTGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggt > 2:421009‑M1/2‑8 (MQ=255) | AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGA‑CCT‑CCG‑CC‑ATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGT > NZ_CP025268/3864306‑3864573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |