New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 4411560326 (1.100)12 (0.040) 10/256 9.3 3.7% coding (360/732 nt) rlmB 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
?NZ_CP025268 = 4411623 318 (1.150)coding (423/732 nt) rlmB 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 340 total aligned reads displayed.

GTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTATCAGAGCAAAA  >  NZ_CP025268/4411485‑4411759
                                                                                                                                          |                                                                                                                                        
gTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAg                                                                                                                                         >  1:1271940/1‑140 (MQ=255)
gTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAg                                                                                                                                         >  1:2659028/1‑140 (MQ=255)
   ccTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCt                                                                                                                                      >  2:3369582/1‑140 (MQ=255)
         gATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTgcggcg                                                                                                                                <  1:3048298/140‑1 (MQ=255)
           tCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTgcggcgcg                                                                                                                              >  1:1631822/1‑140 (MQ=255)
            ccTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTgcggcgcgg                                                                                                                             >  1:1223944/1‑140 (MQ=255)
             cTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTGCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTgcggcgtccg                                                                                                                            <  1:3147206/140‑5 (MQ=255)
                    gCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAGAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGc                                                                                                                     >  2:2911609/1‑140 (MQ=255)
                     cGTAACCGATCCGCACACCCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCg                                                                                                                    <  1:606686/140‑1 (MQ=255)
                     cGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCg                                                                                                                    <  1:1136996/140‑1 (MQ=255)
                               ccGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGAt                                                                                                          >  1:4940120/1‑140 (MQ=255)
                                 gCACACCCTCGGCGCGTGCCTGCGTAGTGCCGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGCTCGCTCCGCACAGCTCAACGCTACGGCGAAAACAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTc                                                                                                        <  2:2436289/140‑1 (MQ=255)
                                 gCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTc                                                                                                        <  2:846234/140‑1 (MQ=255)
                                 gCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTc                                                                                                        <  1:1827480/140‑1 (MQ=255)
                                  cacaACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCg                                                                                                       >  2:4791011/1‑140 (MQ=255)
                                   acaACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCgg                                                                                                      <  1:5062957/140‑1 (MQ=255)
                                   acaACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCgg                                                                                                      <  2:2127913/140‑1 (MQ=255)
                                   acaACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCgg                                                                                                      <  1:3021105/140‑1 (MQ=255)
                                   acaACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCgg                                                                                                      <  1:1885285/140‑1 (MQ=255)
                                       ccTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGa                                                                                                  <  2:1690239/140‑1 (MQ=255)
                                        cTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGAc                                                                                                 <  2:4293463/140‑1 (MQ=255)
                                          cGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTa                                                                                               >  2:4663197/1‑140 (MQ=255)
                                          cGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTa                                                                                               >  2:1295451/1‑140 (MQ=255)
                                            gcgcGTGCCTGCGTAGTGCGGGCGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAAc                                                                                             <  1:3373255/140‑1 (MQ=255)
                                            gcgcGTGCCTGCGTAGTGCGGAGGCCGCAGGCGTTCATGCGGTGATTCTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAACTATCCTGCGTCGCGGCAGAAAGCGATCCGGTGCGTCGTGGTACTAAc                                                                                             >  2:4012187/1‑140 (MQ=255)
                                            gcgcGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAAc                                                                                             <  1:2309527/140‑1 (MQ=255)
                                            gcgcGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAAc                                                                                             <  1:1360640/140‑1 (MQ=255)
                                                 tGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGTAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgc                                                                                        >  2:3742797/1‑140 (MQ=255)
                                                 tGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTc                                                                                                        >  1:5009841/1‑124 (MQ=255)
                                                 tGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTc                                                                                                        >  2:4585746/1‑124 (MQ=255)
                                                 tGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgc                                                                                        >  2:3542205/1‑140 (MQ=255)
                                                  gCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGTCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGCAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcg                                                                                       <  2:3057199/140‑1 (MQ=255)
                                                  gCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcg                                                                                       <  2:162141/140‑1 (MQ=255)
                                                  gCCTGCGTAGTGCGGACGCCGCAGGCGCTCATGCGGTGATTGTGCCGAAAGATCGCTCCGAACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcg                                                                                       <  2:1200394/140‑1 (MQ=255)
                                                   ccTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcgc                                                                                      >  1:2101100/1‑140 (MQ=255)
                                                    cTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcgcg                                                                                     <  2:562769/140‑1 (MQ=255)
                                                    cTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcgcg                                                                                     <  1:2725827/140‑1 (MQ=255)
                                                    cTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcgcg                                                                                     <  2:5011704/140‑1 (MQ=255)
                                                    atGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTgcgcg                                                                                     <  1:4526276/139‑1 (MQ=255)
                                                      gCGTAGTGCGGACGCCGCAGGCGTTCGTGCGGTGATTGTGCCGAATGCTCGCTCCGAACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCTGCGCGGCAGAAATCGTTCCGCTGATTCGGGTGACTAACCTTgcccgta                                                                                   <  2:1385215/140‑3 (MQ=255)
                                                      gCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCa                                                                                   <  1:4483725/140‑1 (MQ=255)
                                                       cGTAGTTCGGATGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGGAGCCTGGGGCGCGGCAGAAGGCGTTCCGCTGATTCGCGTGACTAACCTTGCGCGCAc                                                                                  <  2:2226496/140‑1 (MQ=255)
                                                       cGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCAc                                                                                  <  2:915292/140‑1 (MQ=255)
                                                       cGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCAc                                                                                  <  1:4823434/140‑1 (MQ=255)
                                                          aGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCag                                                                               <  1:1986218/140‑2 (MQ=255)
                                                          aGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCAt                                                                               <  1:4274449/140‑1 (MQ=255)
                                                           tctgccgcgccgcAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATg                                                                              >  2:365908/8‑140 (MQ=255)
                                                            tGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGc                                                                             >  1:354199/1‑140 (MQ=255)
                                                            tGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGc                                                                             >  1:3854650/1‑140 (MQ=255)
                                                            tGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGc                                                                             >  2:4107305/1‑140 (MQ=255)
                                                            tGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGc                                                                             >  1:4358216/1‑140 (MQ=255)
                                                              cGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGt                                                                           <  1:3004384/140‑1 (MQ=255)
                                                              cGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGt                                                                           >  1:2524480/1‑140 (MQ=255)
                                                              cGGACCACGAAGGCGTTCATGCGGAGATCGTGACGAAAGAGCGCTACGCACAGCATGACGCGACGGCGAAAAAAGTAGCCTTCGGAGCGGCCGAAAGCGTTGCGCTGATCAGGGTGACTAACCTAAGGCGCATCATgaga                                                                           >  2:3236294/1‑137 (MQ=255)
                                                                  cgccgcAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGt                                                                       <  1:90225/140‑1 (MQ=255)
                                                                     ggcAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTACGCACAGCTCAACGATACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCGGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGc                                                                    <  2:2733/139‑1 (MQ=255)
                                                                     cgcAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGc                                                                    >  1:834070/1‑140 (MQ=255)
                                                                             ttCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAagag                                                            <  2:1821340/140‑1 (MQ=255)
                                                                             ttCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAagag                                                            <  2:2949450/140‑1 (MQ=255)
                                                                                  gCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAatat                                                       <  2:690732/140‑1 (MQ=255)
                                                                                    ggTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCt                                                     <  1:3331981/140‑1 (MQ=255)
                                                                                        aTTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGAt                                                 >  1:3878009/1‑140 (MQ=255)
                                                                                        aTTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGAt                                                 >  2:2387362/1‑140 (MQ=255)
                                                                                            tgCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGAtcgtc                                             <  2:808877/140‑1 (MQ=255)
                                                                                               cGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGt                                          <  2:146971/140‑1 (MQ=255)
                                                                                                  aaGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACg                                       >  2:5057182/1‑140 (MQ=255)
                                                                                                         cTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcg                                <  1:4781546/140‑1 (MQ=255)
                                                                                                           ccGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgag                              <  1:4714942/140‑1 (MQ=255)
                                                                                                           ccGCACAGCGCAACGCTACGGCGAAAAAAGTAGCCTCCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGGCGGTACGGCaggcgag                              <  2:4189727/140‑1 (MQ=255)
                                                                                                            cGCACAACTCAACGCTACGGCG‑AAACAGTCGCCTGCGGCGCGGCCGAAAGCGTTCCGATGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGACGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  2:4137795/140‑1 (MQ=255)
                                                                                                             gcccaGCCCAACGCTACGGCGCAACACGCAGCCTGCGGCGCCGCACAAAGCGTTCCGATGATTCGGGTGACTACCCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  1:2895070/137‑1 (MQ=255)
                                                                                                             gCACAGCTCCACGCTACGGCGAACAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTACCCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  2:4487457/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  1:2240533/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  2:4863854/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  2:3444478/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  1:328548/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  2:1127431/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  1:2480567/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  2:2017608/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGGTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCaggcgaggc                            <  1:2576345/140‑1 (MQ=255)
                                                                                                             gCACAGCTCAACGCTACGGCCAAAAAAGTACCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAAAATATCTGGATCGTCAGTACGGCaggcgaggc                            <  1:534542/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  2:2667811/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  1:4142553/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  1:4058760/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  2:2204816/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  1:2134960/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  2:2535876/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  1:3359003/140‑1 (MQ=255)
                                                                                                                   cTCAACGCTACGGCGAAAAAAGTAGCCTGCGGAGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCa                      <  1:1043730/140‑1 (MQ=255)
                                                                                                                     cAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATa                    <  2:39188/140‑1 (MQ=255)
                                                                                                                     cAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATa                    <  1:3804991/140‑1 (MQ=255)
                                                                                                                      aaCGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATac                   <  1:681476/140‑1 (MQ=255)
                                                                                                                        cGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCGGATTCGGGTGACTAACCGTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGGACGGCAGGCGAGGCGGATCATacac                 >  1:4914850/1‑140 (MQ=255)
                                                                                                                         gCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCTGGTAACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACAct                <  1:3646456/140‑1 (MQ=255)
                                                                                                                             cGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTAt            <  2:4358216/140‑1 (MQ=255)
                                                                                                                             cGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTAt            >  1:949841/1‑140 (MQ=255)
                                                                                                                             cGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTAt            <  1:1579904/140‑1 (MQ=255)
                                                                                                                                cGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTATCag         <  2:2816455/140‑1 (MQ=255)
                                                                                                                                cGAAAAAAGGAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCTCGCGCCACGCGTATCTCGCAGAAAGAGAATATCAAGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTATCag         <  2:2592196/140‑1 (MQ=255)
                                                                                                                                  aaaaaaGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTATCagag       >  1:4303643/1‑140 (MQ=255)
                                                                                                                                          |                                                                                                                                        
GTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTATCAGAGCAAAA  >  NZ_CP025268/4411485‑4411759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.