| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 661,202 | A→C | D42E (GAT→GAG) | lipB ← | lipoyl(octanoyl) transferase LipB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 661,202 | 0 | A | C | 98.7% | 995.2 / NA | 305 | D42E (GAT→GAG) | lipB | lipoyl(octanoyl) transferase LipB |
| Reads supporting (aligned to +/- strand): ref base A (2/2); new base C (164/136); total (167/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 305 total aligned reads displayed.
ACATACATCACCTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGATCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTC > NZ_CP025268/661068‑661338 | acatacatCACCTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGAc > 2:2791221/1‑140 (MQ=255) atCACCTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGAGCACCGGAATATCACCCGGCATTAGAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGAccagcca > 2:2385539/1‑140 (MQ=255) aCCTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGAt > 1:1565190/1‑140 (MQ=255) aCCTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGAt > 1:195780/1‑140 (MQ=255) aCCTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCAACGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCATGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGAt > 2:4412456/1‑140 (MQ=255) ccTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATTACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGAtt > 1:3746138/1‑140 (MQ=255) tGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtc > 1:2375248/1‑140 (MQ=255) tGTTCCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtc < 2:3152846/140‑1 (MQ=255) ttGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcat > 1:700644/1‑140 (MQ=255) ttGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcat > 1:1447253/1‑140 (MQ=255) tGCCCCGGCCCGTGATAAGTCACCTGCCCTCCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatc < 2:4537136/140‑1 (MQ=255) tGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatc < 2:300913/140‑1 (MQ=255) tGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatc < 2:3373868/140‑1 (MQ=255) tGCCCCGGCCCGTGATAAGTCAACTGCCCACCGCGTTCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatc < 1:2544319/140‑1 (MQ=255) tGCCCCGGCCCGTGATAAGCCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatc < 1:2054831/140‑1 (MQ=255) gCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatca < 2:1266780/140‑1 (MQ=255) gCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatca < 2:4904824/140‑1 (MQ=255) gCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTtcatca < 2:4206770/140‑1 (MQ=255) cGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAggg > 1:5040403/1‑140 (MQ=255) cGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAggg < 2:2566878/140‑1 (MQ=255) cGGCCCGTGATAAGGCACCTGCCCACCGAGATCGCTCTGGATCACCGGAATACCACCCGGCATTAAAATGTGCTCCGATTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAggg < 2:2730366/140‑1 (MQ=255) ggCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGt > 2:3802463/1‑140 (MQ=255) gCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTa < 2:1746044/140‑1 (MQ=255) gCCCGTGATAAGGTACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATGACCCGGCATTAAAATGGGCTCCGCTTTTCCTGCC‑GGTCGTGGGTGTAATACTGGATAGTGCTCGATCAGCCCTATTTGATGAAGGGTa > 2:1330594/1‑140 (MQ=255) cGTGATAAGTCGCCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTa < 1:933685/140‑1 (MQ=255) tGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTatc > 1:4788460/1‑140 (MQ=255) aGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATcgc < 1:4511853/140‑1 (MQ=255) cACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCggg < 1:4417733/140‑1 (MQ=255) aCCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGt < 2:781895/140‑1 (MQ=255) ccTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTa > 1:3369800/1‑140 (MQ=255) ccTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTGTTCCTGCCTGACCTTGGGTG‑AATACCGGGTAGTGCTCGACCAGCCAGATTTGGTCAAGGGTACTATCATCGCGGGTa > 2:3766028/1‑140 (MQ=255) cTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTAt > 2:4820727/1‑140 (MQ=255) tGCCCACCGCGATCGCTGTGGATCCCCGGAATCTCACCCGGCATTCAAAGGTGCTCCGCTTTTCCTTCCTGACCTTGGGTG‑AATATCGGATAGTGATCGACCAGCCAGATTTCATCATGGGTACTATCATTGCGGGtggt > 2:1464517/1‑137 (MQ=255) cccACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCgg > 1:3802146/1‑140 (MQ=255) cACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTg < 2:2074214/140‑1 (MQ=255) cACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTg < 1:1014665/140‑1 (MQ=255) cACCGCGATCGCTCTGGATCACAGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTGGATCAAGGGTACTATCATCGCGGGTATCGGTg < 2:3282440/140‑1 (MQ=255) cgcgATCGCTCTGGATCACCGGAATGTCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAAt > 1:3023215/1‑140 (MQ=255) cgcgATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAAt > 1:1103546/1‑140 (MQ=255) gcgATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAAtt < 1:1143158/140‑1 (MQ=255) gcgATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAAtt < 2:167244/140‑1 (MQ=255) cgATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTGGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTc > 2:1849015/1‑140 (MQ=255) tCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATg < 1:281028/140‑1 (MQ=255) gcgctGGATCACAGGAATCTCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACATTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCa < 1:657448/137‑1 (MQ=255) gCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCa < 2:613188/140‑1 (MQ=255) gCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCa < 2:3593808/140‑1 (MQ=255) gCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCa < 1:1616766/140‑1 (MQ=255) gCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCa < 1:2260654/140‑1 (MQ=255) gCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCa < 1:3982148/140‑1 (MQ=255) gCTCTGGATCACAGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCa < 2:1875411/140‑1 (MQ=255) ctctGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCAt < 1:4596826/140‑1 (MQ=255) aTCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTg < 1:593799/140‑1 (MQ=255) aTCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTg < 1:3628193/140‑1 (MQ=255) ccGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGgag > 1:2788246/1‑140 (MQ=255) cGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCCTGCATAGCCTGGgaga > 2:746546/1‑140 (MQ=255) aaTATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTg < 1:3545980/140‑1 (MQ=255) cACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCg < 2:1112193/140‑1 (MQ=255) cccGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa < 1:4699219/140‑1 (MQ=255) cccGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa < 1:383590/140‑1 (MQ=255) cccGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa < 2:3848486/140‑1 (MQ=255) cccGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa < 1:404522/140‑1 (MQ=255) cccGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa < 2:2900732/140‑1 (MQ=255) cccGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa > 1:1173654/1‑140 (MQ=255) cccGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTACCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa < 1:3304760/140‑1 (MQ=255) cccGGCATTAAAATGTGCGCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGTGTACTATAATCGCGGGTATCGGTGAATTCATGCATAGCTTGGGAGATTGGCTCGTa < 2:2278023/140‑1 (MQ=255) ggCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAgg > 2:2145780/1‑140 (MQ=255) ggCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAgg > 1:4974909/1‑140 (MQ=255) ggCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAgg > 1:1505155/1‑140 (MQ=255) ggCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAgg > 2:408635/1‑140 (MQ=255) aTTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTg < 1:4874803/140‑1 (MQ=255) tcaaaaTGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGGGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGCTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGa > 1:1267012/3‑140 (MQ=255) tgCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAg > 2:2771992/1‑140 (MQ=255) tgCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAg > 2:4928069/1‑140 (MQ=255) tgCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAg > 2:3901138/1‑140 (MQ=255) cGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGc > 2:732654/1‑140 (MQ=255) cTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCgg > 1:1821281/1‑140 (MQ=255) ttCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACa > 1:2285705/1‑140 (MQ=255) ttCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACa < 2:700644/140‑1 (MQ=255) cctgcctgACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATCTCATCAGGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCCGGGAGTTTGGCTCGTAAGGCTTAAGACCGAGCTGGCGGACAAg > 2:1307912/1‑140 (MQ=255) ctgACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAAttt < 2:3711703/140‑1 (MQ=255) ctgACCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAAttt < 2:4722644/140‑1 (MQ=255) ctgACCTTGGGTG‑AATACCGGATAGAGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCACGTAAGGCTGAAGACCGAGCTGGCGGACAAGAAttt > 2:4588525/1‑140 (MQ=255) aCCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa > 2:378765/1‑105 (MQ=255) aCCTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTa < 1:378765/105‑1 (MQ=255) aCCTTGGGTG‑AATACCGGAGAGTGCTCGACCAGCCAGATTTCAGCAAGGGTACTATCATCGCGGGTATCGGTGCATTCATGCATAGCCTGGGAGAATGTCTCGTAAGGGTGAAGAGCGACGTGGCGTCCAATAATCTTAt > 2:1556267/1‑140 (MQ=255) ccTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATc < 2:3487351/140‑1 (MQ=255) cTTGGGTG‑AATACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATcc < 2:932218/140‑1 (MQ=255) aaTACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACaa > 2:2483116/1‑140 (MQ=255) aaTACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACaa > 1:2685802/1‑140 (MQ=255) aaTACCGGATAGTGCTAGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTCTCGGTGAATTCATGCATAGCCTGGGAGATTGGATCGTAAGGCTGAAGACCGCGCTGGCGGATAAGACTTTTATCATGATACaa > 2:1381080/1‑140 (MQ=255) tACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCGTCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACaaaa > 1:4355972/1‑140 (MQ=255) tACCGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACaaaa > 1:407586/1‑140 (MQ=255) cGGATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACgg < 2:4633652/140‑1 (MQ=255) gATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCa > 2:435063/1‑140 (MQ=255) gATAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGACACAAAACGGCa < 1:4238585/140‑1 (MQ=255) aTAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCTGACAAGAATTTTATCCTGATAAAAAACGGCAt < 2:4331919/140‑1 (MQ=255) aTAGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGAGACGAAACGGCAt > 2:3519439/1‑140 (MQ=255) tAGTGCTCGACCAGCCAGATTTCATCAACGGTACTATCATCTCGTGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCAtc < 2:1012368/140‑1 (MQ=255) aGTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCAtct < 2:3263426/140‑1 (MQ=255) gTGCTCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCAtctc < 2:2959520/140‑1 (MQ=255) | ACATACATCACCTGTTGCCCCGGCCCGTGATAAGTCACCTGCCCACCGCGATCGCTCTGGATCACCGGAATATCACCCGGCATTAAAATGTGCTCCGCTTTTCCTGCCTGACCTTGGGTG‑AATACCGGATAGTGATCGACCAGCCAGATTTCATCAAGGGTACTATCATCGCGGGTATCGGTGAATTCATGCATAGCCTGGGAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTC > NZ_CP025268/661068‑661338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |