| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,463,436 | G→A | A118A (GCG→GCA) | paaG → | 2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase PaaG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,463,436 | 0 | G | A | 98.7% | 1109.8 / ‑5.8 | 316 | A118A (GCG→GCA) | paaG | 2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase PaaG |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (189/121); minor base C (1/3); total (191/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 320 total aligned reads displayed.
ATCCCACAGGCCCCGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCGCT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGG > NZ_CP025268/1463297‑1463572 | ccccGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCg > 2:2740320/1‑140 (MQ=255) ccccGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCg > 1:4065831/1‑140 (MQ=255) cccGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGTCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGa < 2:4380808/140‑1 (MQ=255) ccGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGAc < 1:2429512/140‑1 (MQ=255) ccGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGAc < 2:1682503/140‑1 (MQ=255) ccGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGAc > 1:668731/1‑140 (MQ=255) cGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACG‑GGGGGGCGACa > 2:280204/1‑140 (MQ=255) gCACCGGGTTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACAt > 1:3162909/1‑140 (MQ=255) aCCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCg < 2:74942/140‑1 (MQ=255) ccGGAGTTAGGGATGTCAGTTTAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGt < 2:4526759/140‑1 (MQ=255) ggATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTa > 2:1377961/1‑140 (MQ=255) ggATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGGCAATGGCGTGGCGGCAGGGGCAGGCTCAACAGTGGCACG‑GGGGGGCGTCAGCGTTa > 2:3245392/1‑140 (MQ=255) ggATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTACCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTa > 2:2357899/1‑140 (MQ=255) tGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGt > 1:275254/1‑140 (MQ=255) gTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCTTGGCAACACTGGCAAAACCGGTGATCTGTGCAGTCAATGGCGTTGCGGCAGGGGCAGGCGCAATACTTGCACT‑GGGGGGCGGTATCGTTATTGCTGCCCGtt > 2:3007359/1‑140 (MQ=255) gTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGGGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCATTATTGCTGCCCGtt > 2:1457675/1‑140 (MQ=255) gTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGtt < 1:2500902/140‑1 (MQ=255) gTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGtt > 2:3914001/1‑140 (MQ=255) gTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGtt < 2:1829257/140‑1 (MQ=255) aaCGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAGAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCaaaa > 1:4947752/1‑140 (MQ=255) cGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACTGGGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAAt > 1:1328859/1‑140 (MQ=255) tCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTc > 1:1600969/1‑140 (MQ=255) tCTATAACCCACAGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCCCT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTc < 1:4374944/140‑1 (MQ=255) cTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCa < 1:3850039/140‑1 (MQ=255) tataACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCAt < 2:1081537/140‑1 (MQ=255) taACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATgg < 1:100238/140‑1 (MQ=255) ccACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGtt > 2:4477863/1‑140 (MQ=255) cACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGttt > 1:2409063/1‑140 (MQ=255) cACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGAGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGttt > 2:4684877/1‑140 (MQ=255) aCTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTa > 1:1741434/1‑140 (MQ=255) cTGGTACGTCGCCTGGCAAAACTGCTAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAg > 2:4573476/1‑140 (MQ=255) cTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTGGCCATGGCGTTTAg > 2:2659487/1‑140 (MQ=255) cTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAg > 2:933710/1‑140 (MQ=255) tGGTCCGTCGCCGGGCAAAACTGGCAAAACCGGTCAGTGTTGCAGTCAATGGCGTGGAGGCAGGGGCAGGCGCAACACTGGCCCT‑GGGGGGCGACATCGTTATTGCTGCCAGTTCAGCAAAATTCGTCATGGCGTTTAGt < 2:4208724/140‑1 (MQ=255) tGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGt > 1:1220585/1‑140 (MQ=255) tGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGt > 1:3967579/1‑140 (MQ=255) tGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGt > 1:2168961/1‑140 (MQ=255) tGGTACGTCGCCTCGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGGAGGGGAAGGGGCAACACTGGCAGT‑GGGGGGCGTCATCGTTATTGCTGCCAGTTCAGCAAAATTCGTCATGGCGTTTAGt < 2:4786162/140‑1 (MQ=255) cGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGtt < 1:2954771/140‑1 (MQ=255) cGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGtt < 2:2190973/140‑1 (MQ=255) cGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGtt < 1:271333/140‑1 (MQ=255) gTCGCCTGGCTAAACTGCCAACACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCCAGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCGAAATTCGTCATGGCGTTTAGTAAGGTa < 2:3745152/140‑1 (MQ=255) gTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTa > 1:3384902/1‑140 (MQ=255) tCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTGATTGCTGCCCGTTCAGCAAAATTCGTCAGGGCGTTTAGTAAGTGAg > 2:4762478/1‑140 (MQ=255) cGCCTGGCAAAACTGCCAAAAGCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAgg < 2:5018070/140‑1 (MQ=255) cGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAgg > 1:1831554/1‑140 (MQ=255) cGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGGCAATTGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGGTCAGCAAAATGCGTCATGGCTTTTAGTAAGTTAgg > 2:1512458/1‑140 (MQ=255) ccTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCt > 1:4725784/1‑140 (MQ=255) ccTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCt > 1:3785219/1‑140 (MQ=255) ccTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCt > 1:863433/1‑140 (MQ=255) ccTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCt > 2:3320246/1‑140 (MQ=255) ccTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCt > 2:3714594/1‑140 (MQ=255) tGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTa < 1:499148/140‑1 (MQ=255) gCAAAACTGCCAAAACCGGTGATCTGTGCAGGCAATGGCGTGGCGGCAGGGGCAGGCGGAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGGTTAGTAAGTTAGGCGTAAt > 2:2083937/1‑140 (MQ=255) agcTGCCACAACCGCTGATCTGTGCAGTCAATGGCGTGGCGCCATGGGCAGCCGCATCACTGGCCTT‑GGGGGGCGACATCGTTATTGCTGCTCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATAccc < 2:4364731/138‑1 (MQ=255) tGCCTAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTGATTGCTGCCCGTTCAGCAAAATTCGGCATGGCGTTTAGTAAGTTAGGCTTAAGACCCGAt < 2:4138480/140‑1 (MQ=255) cAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGc > 1:3096090/1‑140 (MQ=255) aaaCCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCgg < 2:2405191/140‑1 (MQ=255) aaCCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGt < 1:413330/140‑1 (MQ=255) aaCCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGt < 1:1190064/140‑1 (MQ=255) ggTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGaa < 1:4581321/140‑1 (MQ=255) gTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAAc < 2:1265591/140‑1 (MQ=255) gTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAAc < 2:1741434/140‑1 (MQ=255) cTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGt < 1:1044240/140‑1 (MQ=255) tgCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTAc > 1:1380900/1‑140 (MQ=255) tgCAGCCACTGGCGTGGCGGCAGGGGCATGCGCACCACTGGCACC‑GGCGGGCGCCATCGGTATTGCTGCCCGTGCAGCAAACTTCGTCATGGCGATTAGTACGTTAGGCTTCATACGGGATTGCGCTGGAACCTGGTTAc > 2:4147353/1‑140 (MQ=255) aGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGc < 2:1105499/140‑1 (MQ=255) tCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCa > 1:3317247/1‑140 (MQ=255) tCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCa > 2:103559/1‑140 (MQ=255) tCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCa > 1:2152842/1‑140 (MQ=255) tCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTT‑CTGCCAc > 1:4162358/1‑140 (MQ=255) tCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGCAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCa > 2:458893/1‑140 (MQ=255) aaTGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCAcg > 2:2330940/1‑140 (MQ=255) aaTGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCAcg < 1:3928151/140‑1 (MQ=255) aaTGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCAcg > 2:644958/1‑140 (MQ=255) aTGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTACTGCTGCCCGTTCAGCAAACTTCGTCATGGCGTTTAGTAAGTTAGGCTTCATACCCGATTGCGGTGGAACCTGGTTACTGCCAcgc < 1:1359717/140‑1 (MQ=255) ggcgtggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGt > 2:3588856/1‑140 (MQ=255) ggcgtggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGt > 2:777432/1‑140 (MQ=255) ggcgtggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGt > 1:2636726/1‑140 (MQ=255) ggcgtggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGt > 1:356882/1‑140 (MQ=255) ggcgtggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGt > 1:3641640/1‑140 (MQ=255) ggcgtggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTCACTGCCACGCGt > 2:3602239/1‑140 (MQ=255) ggcgtggcgGCAGAGGCAGGCGCAACACGGGCACG‑GGTGGGCGACATCGTTATTGCTGCCCGGTCAGCAAAATTTGTCATGGCGTTTAGTAAGTTAGACTTAATACCCGCATGCGATGGAACTGGGTTAATGCCACGCGt > 2:879454/1‑140 (MQ=255) gtggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGc < 1:516403/140‑1 (MQ=255) tggcgGCAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGcc > 2:2455639/1‑140 (MQ=255) ggcggcAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCg > 2:3792587/1‑140 (MQ=255) ggcggcAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCg > 1:4326476/1‑140 (MQ=255) ggcggcAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCg > 1:2045799/1‑140 (MQ=255) ggcggcAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCg > 2:1896056/1‑140 (MQ=255) ggcggcAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCg > 2:2311417/1‑140 (MQ=255) ggcggcAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCg > 2:25299/1‑140 (MQ=255) cggcAGGGGCAGGCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGa > 2:4046881/1‑140 (MQ=255) gggcaggCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAgcg < 1:1915946/140‑1 (MQ=255) ggcaggCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATCCCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAgcgc < 1:916436/140‑1 (MQ=255) gcaggCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAgcgcg < 1:231579/140‑1 (MQ=255) gcaggCGCAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAgcgcg < 1:2074624/140‑1 (MQ=255) gcgcAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGcc < 1:3740314/140‑1 (MQ=255) gcAACACTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGCCAt < 2:3093022/140‑1 (MQ=255) acacTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGCCATggg > 1:1431091/1‑140 (MQ=255) acTGGCACT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGc < 2:3404857/140‑1 (MQ=255) | ATCCCACAGGCCCCGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCGCT‑GGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGG > NZ_CP025268/1463297‑1463572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |