BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,731,441	A→G	200 (TAA→TAG)	nemR →	DNA‑binding transcriptional regulator NemR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,731,441	0	A	G	100.0%	1085.9 / NA	323	200 (TAA→TAG)	nemR	DNA‑binding transcriptional regulator NemR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (150/173); total (150/173)

Only 100 of 323 total aligned reads displayed.

GAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAACAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCAGTATTGAA  >  NZ_CP025268/1731304‑1731576

gAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCa                                                                                                                                       >  1:3094699/1‑140 (MQ=255)

 aaCCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACTCCTTCCGTTTAGCAg                                                                                                                                      >  2:3910454/1‑140 (MQ=255)

 aaCCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGCCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAg                                                                                                                                      >  1:2654252/1‑140 (MQ=255)

        gCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCAtttt                                                                                                                               <  2:3803786/140‑1 (MQ=255)

                 acaAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCa                                                                                                                      >  1:2842928/1‑140 (MQ=255)

                 acaAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCa                                                                                                                      >  1:2525718/1‑140 (MQ=255)

                  cgaGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAg                                                                                                                     <  1:2989688/138‑1 (MQ=255)

                    aGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAgac                                                                                                                   <  1:4844395/140‑1 (MQ=255)

                         tttACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCg                                                                                                              >  1:3606166/1‑140 (MQ=255)

                           tccGCACTGTAGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCCGTTTCGAGCCACTGGAAAACGCGATGGAACATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACAACCggg                                                                                                            <  2:367100/138‑1 (MQ=255)

                           tACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCggg                                                                                                            <  2:4741506/140‑1 (MQ=255)

                           tACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCggg                                                                                                            <  1:3781049/140‑1 (MQ=255)

                           tACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCggg                                                                                                            <  2:4356971/140‑1 (MQ=255)

                           tACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCggg                                                                                                            <  1:105598/140‑1 (MQ=255)

                           tACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCggg                                                                                                            >  1:914275/1‑140 (MQ=255)

                           tACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCggg                                                                                                            <  2:2230356/140‑1 (MQ=255)

                           tACGAACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCggg                                                                                                            <  1:1947020/140‑1 (MQ=255)

                            aCGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGa                                                                                                           <  2:300036/140‑1 (MQ=255)

                             cGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCCGTTTCGAGCCACTGGAAAACGCTCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGCTTAGCAGGCATTTTTTATCACCAGACGACCGGGAg                                                                                                          >  2:4683189/1‑140 (MQ=255)

                                aCTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCt                                                                                                       >  2:1100204/1‑140 (MQ=255)

                                  tgtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAACCGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCgtt                                                                                                     >  1:2103944/1‑140 (MQ=255)

                                  tgtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCttt                                                                                                     >  2:4820181/1‑140 (MQ=255)

                                  tgtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCttt                                                                                                     >  2:2318711/1‑140 (MQ=255)

                                  tgtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCttt                                                                                                     >  2:2256441/1‑140 (MQ=255)

                                  tgtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCttt                                                                                                     >  2:1334260/1‑140 (MQ=255)

                                  tgtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACAACCGGGAGCCttt                                                                                                     >  2:4432510/1‑140 (MQ=255)

                                  tgtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGAAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCgtt                                                                                                     >  2:1695897/1‑140 (MQ=255)

                                   gtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCGACTGGAAAACGCGATGGCACATGTACAAAACATTATTGCGACGCCTTCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGAAGACtttc                                                                                                    >  2:4478992/1‑139 (MQ=255)

                                   gtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTa                                                                                                    >  1:1107503/1‑140 (MQ=255)

                                   gtgGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTa                                                                                                    >  1:1729108/1‑140 (MQ=255)

                                   gtgCCTTGGCGCGAAACTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGTAAACGCGCTGGCCCATGTAAAAAACACTATTGCGACGCCTGCCGTTTAGCAGGCCTTTTTTATCACCAGACGACCGGGAGCCttca                                                                                                    >  2:1222342/1‑138 (MQ=255)

                                    tgGGTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGGGCTGGCCCATGTAAAAAACATTGTTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTAt                                                                                                   <  1:3744496/140‑1 (MQ=255)

                                       cTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTc                                                                                                >  2:1753065/1‑140 (MQ=255)

                                          ggCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCgg                                                                                                             >  1:5074239/1‑124 (MQ=255)

                                          ggCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATc                                                                                             >  2:700247/1‑140 (MQ=255)

                                          ggCGCGAATCTGCAGGCCAAAATGTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATc                                                                                             >  2:4752106/1‑140 (MQ=255)

                                            cgcgAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTg                                                                                           >  1:32357/1‑140 (MQ=255)

                                            cgcgAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTg                                                                                           >  1:3201980/1‑140 (MQ=255)

                                            cgcgAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTg                                                                                           >  1:1202830/1‑140 (MQ=255)

                                            cgcgAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTg                                                                                           >  1:741913/1‑140 (MQ=255)

                                              cgAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGaa                                                                                         <  1:3474303/140‑1 (MQ=255)

                                              cgAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGaa                                                                                         <  1:2268110/140‑1 (MQ=255)

                                                 aTCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGaaaaa                                                                                      <  1:3874199/140‑1 (MQ=255)

                                                     gCAGTCCAAAATTTCGCTCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACACTATTGCGAAGCCTGCCGTTTAGCAGGCATGTTTAATCACCAGACGACAGGGAGCCCTTATGTCATCTGaaacagcgt                                                                                  >  2:2752405/1‑134 (MQ=255)

                                                      cAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTa                                                                                 >  2:1513055/1‑140 (MQ=255)

                                                         gCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTc                                                                              <  2:541427/140‑1 (MQ=255)

                                                           cAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTccc                                                                            >  1:4532338/1‑140 (MQ=255)

                                                           cAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTccc                                                                            >  1:4618608/1‑140 (MQ=255)

                                                             aaaTTTCGCGAAGTTTCTAGCCCCTGGAAACCGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTCGCAGGCATTTTTTATCACCAGACGACCGGGAGACTTTATGTCATCTGAAAAACCGTATTCCCCa                                                                          <  2:1809015/140‑1 (MQ=255)

                                                                     cgcAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGt                                                                  >  1:1348489/1‑140 (MQ=255)

                                                                        aGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGTCCGGGAACCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTggg                                                               <  1:693203/140‑1 (MQ=255)

                                                                        aGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTCTATTCCCCACTGAAAGTggg                                                               <  2:4775060/140‑1 (MQ=255)

                                                                            tCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGcgcg                                                           <  1:2344694/140‑1 (MQ=255)

                                                                              gAGCCACTGGAACACGCGCTGGCCAATGTAAAAAACCTTATTGCGACGCATGCCGTTTAGCAGGCATTTTTTATCACCAAACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTACTCCCCCCTGAAAGTGGGAGCGAt                                                         <  2:3239877/140‑1 (MQ=255)

                                                                              gAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGAt                                                         <  1:2906134/140‑1 (MQ=255)

                                                                                       gAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACggcggc                                                <  1:2256346/140‑1 (MQ=255)

                                                                                        aaaaCGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCa                                               <  1:2024219/140‑1 (MQ=255)

                                                                                            cgcgCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCACAcc                                           >  1:4214418/1‑140 (MQ=255)

                                                                                            cgcgCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAAcc                                           >  1:3453702/1‑140 (MQ=255)

                                                                                               gcTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTa                                        >  1:1565872/1‑140 (MQ=255)

                                                                                                  ggCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTAttt                                     >  1:2234967/1‑140 (MQ=255)

                                                                                                       aTGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATg                                >  1:869999/1‑140 (MQ=255)

                                                                                                        tGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATgg                               <  2:730020/140‑1 (MQ=255)

                                                                                                        tGTAAAAAACAGTAATGCGCGGCCTGCCGTGTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCGTTATGTCATCTGAAGAACTGTATGCCACACTGAAAGTGGGCGTGATCACGGCGGCAAACCGTATTTTTGTgg                               <  2:5009398/140‑1 (MQ=255)

                                                                                                             aaaaCATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCg                          >  1:3760321/1‑140 (MQ=255)

                                                                                                                 cATTATTGCGACGCCTGCCGTTTCGCAGGCATTTTTTATCACCAGACGACCGCGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGa                      <  1:4911451/140‑1 (MQ=255)

                                                                                                                 cATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGa                      <  2:4880247/140‑1 (MQ=255)

                                                                                                                 cATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGa                      <  1:4001990/140‑1 (MQ=255)

                                                                                                                  attattGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATATCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGAc                     >  1:4777992/1‑140 (MQ=255)

                                                                                                                   ctattGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCACACGACCCTGAGCCTTTATGTCATCTGAAAATCTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGCCACCGCTGAcg                    <  2:2520742/139‑1 (MQ=255)

                                                                                                                    tattGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGAcgc                   >  1:1834771/1‑140 (MQ=255)

                                                                                                                    tattGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGAcgc                   >  1:2074065/1‑140 (MQ=255)

                                                                                                                    tattGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGAcgc                   >  2:3153651/1‑140 (MQ=255)

                                                                                                                         cGACGCCTGCCGTTTAGCAGGTATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTg              <  2:854970/140‑1 (MQ=255)

                                                                                                                           tcGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAGAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:4512406/139‑1 (MQ=255)

                                                                                                                           cccacTGCCGTTTCGCCGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATGTGAAAAACTGTATTCCCCACTGACAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  2:3421638/136‑1 (MQ=255)

                                                                                                                           ccGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAACACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:3910454/139‑1 (MQ=255)

                                                                                                                           ccGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGCCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  2:2654252/139‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGATCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:771657/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCCCTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  2:4060447/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCACACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            >  1:1531814/1‑140 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:349012/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  2:1399298/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            >  1:1381063/1‑140 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            >  1:577058/1‑140 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:1915605/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  2:283762/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:2439958/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:3317624/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:3713712/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:381987/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:4355782/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            >  2:2076200/1‑140 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  1:4270354/140‑1 (MQ=255)

                                                                                                                           aCGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTgcg            <  2:38476/140‑1 (MQ=255)

                                                                                                                           aCGCCTCCCGTTTAGCACGCACTTTTTATCACCAGACGACCGGGAGCCTTTCTGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGCCCACGGCGGCAAACCCTATTTTTATGGCACCGCTGACGCGTCTgcg            <  2:287891/140‑1 (MQ=255)

                                                                                                                             gCCTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCa          <  1:4032888/140‑1 (MQ=255)

                                                                                                                              ccTGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAGAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCAg         >  1:3497591/1‑140 (MQ=255)

                                                                                                                                tGCCGTTTAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCAGTa       <  2:412395/140‑1 (MQ=255)

                                                                                                                                     tttAGCAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCAGTATTGaa  <  2:4254660/140‑1 (MQ=255)

GAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAACAGGCATTTTTTATCACCAGACGACCGGGAGCCTTTATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCAGTATTGAA  >  NZ_CP025268/1731304‑1731576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`