BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	183,450	A→G	K386R (AAG→AGG)	cdaR →	DNA‑binding transcriptional regulator CdaR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	183,450	0	A	G	100.0%	1075.1 / NA	318	K386R (AAG→AGG)	cdaR	DNA‑binding transcriptional regulator CdaR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (176/142); total (176/142)

Only 100 of 318 total aligned reads displayed.

CAAAGGCGTTGTTTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGG‑TGAAGAGCGGTAAGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTT  >  NZ_CP025268/183315‑183586

cAAAGGCGTTGTTTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGtt                                                                                                                                       <  2:2412674/140‑1 (MQ=255)

cAAAGGCGTTGTTTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGtt                                                                                                                                       <  1:2734371/140‑1 (MQ=255)

 aaaGGCGTTGTTTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTa                                                                                                                                      <  2:2190169/140‑1 (MQ=255)

 aaaGGCGTTGTTTATTCATCGTAATACCCTGGAGCATCGGCTTCATCGTATATCGCAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTa                                                                                                                                      <  2:1358736/140‑1 (MQ=255)

       gttgttTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGtt                                                                                                                                <  2:2693630/140‑1 (MQ=255)

        ttgttTTGTCCTCGTAATACCCTGTATTATCGTCTTAATCGTATATCGGAACTGACCGCGCTTGATTTTGGCAATTTTGATTACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGCTACGCGTTa                                                                                                                               <  2:4295904/140‑1 (MQ=255)

        ttgttTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTa                                                                                                                               >  1:3086557/1‑140 (MQ=255)

        ttgttTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTa                                                                                                                               >  2:3874076/1‑140 (MQ=255)

            ttATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGt                                                                                                                           <  2:4347907/140‑1 (MQ=255)

               ttCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGa                                                                                                                        >  1:4662181/1‑140 (MQ=255)

                     gTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAggcggc                                                                                                                  >  2:3364099/1‑140 (MQ=255)

                      tAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGgcggcg                                                                                                                 <  1:1082597/140‑1 (MQ=255)

                      tAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGgcggcg                                                                                                                 <  1:168621/140‑1 (MQ=255)

                      tAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGgcggcg                                                                                                                 <  2:701487/140‑1 (MQ=255)

                      tAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTCACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGgcggcg                                                                                                                 <  1:4905507/140‑1 (MQ=255)

                        aTACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCt                                                                                                               <  2:2089802/140‑1 (MQ=255)

                           cccTGTAGTATCGACTTAATCGTATATCTGAACTTACCGGGCTTGATTTGGCCAATTTTGATGACAGGTTGCTACTGTATGTGGCGTTACAAC‑TGGCTGAAGTGCGGTTGGTTATGCGTTAAGGTTCAGGCGGCGCTGGc                                                                                                            <  2:260168/140‑1 (MQ=255)

                           cccTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGc                                                                                                            <  2:2914299/140‑1 (MQ=255)

                             cTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGTGCTTGATTTGGGCACTTTTGATGACAGGTTGCTGCTGTATCTGCCGTTACAAC‑TGGATCAAGATCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTc                                                                                                          <  2:451054/140‑1 (MQ=255)

                              tGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCa                                                                                                         >  2:1321062/1‑140 (MQ=255)

                              tGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCa                                                                                                         >  2:1775919/1‑140 (MQ=255)

                              tGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCa                                                                                                         >  2:2140624/1‑140 (MQ=255)

                              tGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCa                                                                                                         >  1:1942986/1‑140 (MQ=255)

                              tGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCGCa                                                                                                         >  2:1148533/1‑140 (MQ=255)

                                gAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTg                                                                                                              <  2:1812693/133‑1 (MQ=255)

                                gAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCAtt                                                                                                       >  2:623118/1‑140 (MQ=255)

                                gAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAAGTTGAGGCGGCGCTGGCTCAtt                                                                                                       >  2:2834094/1‑140 (MQ=255)

                                gAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGATTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCAtt                                                                                                       >  1:4778065/1‑140 (MQ=255)

                                     tCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCt                                                                                                  >  2:3079845/1‑140 (MQ=255)

                                     tCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑GGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCGGTCTCATTCTCCt                                                                                                  >  2:369586/1‑140 (MQ=255)

                                     tCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGATGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTcccat                                                                                                  >  2:856413/1‑138 (MQ=255)

                                     tCGGCTTAATCGTATAGCGGAACTGACCGGGCGTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGGGGCGGTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATGCCCCt                                                                                                  >  2:945683/1‑140 (MQ=255)

                                     tCGGATTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGGTTCCAGGTGGCTGCTGTATGTGGCGGTACCCC‑TGGATGAACAGCGGTAGGTTATGCCCTAAGGTTGAGACGGCGCTGGCTCAGTccccc                                                                                                  >  2:2568634/1‑139 (MQ=255)

                                      cGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTc                                                                                                 >  1:3207860/1‑140 (MQ=255)

                                      cGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTACGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTc                                                                                                 <  2:4715183/140‑1 (MQ=255)

                                       ggCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGTTAGGTTATGCGTTAAGGTTGAGGCGGCTCTGGCTCATTCCCCTCa                                                                                                >  2:3380764/1‑140 (MQ=255)

                                        gCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAg                                                                                               >  2:3961559/1‑140 (MQ=255)

                                          ttAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGcc                                                                                             >  1:2913364/1‑140 (MQ=255)

                                            aaTCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCg                                                                                           <  1:4589454/140‑1 (MQ=255)

                                            aaTCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCg                                                                                           <  1:4034004/140‑1 (MQ=255)

                                            aaTCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCg                                                                                           <  1:3536963/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  1:4323416/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  2:4448795/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  1:1775919/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  2:3003053/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  2:147960/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  1:951592/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  1:714694/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  1:3996472/140‑1 (MQ=255)

                                              tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑GGGATGCAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTTGCTCATTCCCCTCAGCCCGaa                                                                                         <  2:2458519/140‑1 (MQ=255)

                                              tCGTATACCGGACCTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                         <  2:232423/140‑1 (MQ=255)

                                                 tataTCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAggg                                                                                      >  1:2347398/1‑140 (MQ=255)

                                                   tatCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGtt                                                                                                                                       <  2:3754100/89‑1 (MQ=255)

                                                   tatCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTa                                                                                    >  1:2129650/1‑140 (MQ=255)

                                                   tatCGGAACTGACCGGGCTGGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGAGGAAGAGCGGTAGGTTATGCGGTAAGGTTGAGGCGGCGGTGGCTCATTCCCCTCAGGCCGAAGGGtc                                                                                    >  2:196998/1‑139 (MQ=255)

                                                      cGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTagag                                                                                 >  2:793822/1‑140 (MQ=255)

                                                        gAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAggg                                                                               >  1:4418574/1‑140 (MQ=255)

                                                        gAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAggg                                                                               >  2:323043/1‑140 (MQ=255)

                                                           cTGACCGGGCTTGATTTTGGCAATTTTGATGACAGGTTGCTGCTGTATGTGACGGTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGGAGAGGGGaa                                                                            >  1:570505/1‑140 (MQ=255)

                                                           cTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGaa                                                                            >  2:839404/1‑140 (MQ=255)

                                                              aCCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGc                                                                         >  1:77344/1‑140 (MQ=255)

                                                              aCCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGc                                                                         >  1:1552799/1‑140 (MQ=255)

                                                              aCCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGc                                                                         >  1:1162275/1‑140 (MQ=255)

                                                              aCCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGc                                                                         >  1:3305455/1‑140 (MQ=255)

                                                                   gCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGaa                                                                    >  2:2010401/1‑140 (MQ=255)

                                                                      tGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTa                                                                 <  1:4640343/140‑1 (MQ=255)

                                                                           tGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGt                                                            <  1:888119/140‑1 (MQ=255)

                                                                           tGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATCCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGt                                                            <  2:1587132/140‑1 (MQ=255)

                                                                           tGGGCAACTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGt                                                            <  1:1609290/140‑1 (MQ=255)

                                                                             ggCAATTTTGATGACAGGTTGCTGCTGCATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCa                                                          >  2:4799954/1‑140 (MQ=255)

                                                                              gCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGTGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAg                                                         >  1:3048793/1‑140 (MQ=255)

                                                                               cAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGt                                                        <  1:4242402/140‑1 (MQ=255)

                                                                                aaTTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGtt                                                       <  2:4042793/140‑1 (MQ=255)

                                                                                  ttttGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCg                                                     >  1:3717607/1‑140 (MQ=255)

                                                                                     tgatgaGAGGCTGCGGCTGTATGTGGCGTTACCACTTGA‑GGAAGTGCGGTAGGTTAGGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCATCCCGACGGGTAGAGGGGTATGCCGGAGTTAACCGTCAGTTCGGGa                                                  <  2:3737477/140‑1 (MQ=255)

                                                                                     tgatgaCAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGa                                                  <  2:1913882/140‑1 (MQ=255)

                                                                                     tgatgaCAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGa                                                  <  1:3961559/140‑1 (MQ=255)

                                                                                          aCAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGattatt                                             <  1:2232061/140‑1 (MQ=255)

                                                                                          aCAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTGATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGattatt                                             <  1:1492411/140‑1 (MQ=255)

                                                                                            aGGTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTa                                           >  1:642930/1‑140 (MQ=255)

                                                                                             ggTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTAc                                          >  1:4546348/1‑140 (MQ=255)

                                                                                              gTTGCTGCTGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTAcg                                         >  1:1268066/1‑140 (MQ=255)

                                                                                                 gctgctGTATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGt                                      >  2:2418736/1‑140 (MQ=255)

                                                                                                        tATGTGGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATGATTTACGCGTTAGtttt                               >  2:4599239/1‑140 (MQ=255)

                                                                                                        gaTGTGGCGTTACAAC‑TGGATGAACAGCGGTAGGGTAAGCGTGAAGGCTCGGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCCGGTCGGGATTATCGACGCGTCAGttgt                               >  2:3485951/2‑138 (MQ=255)

                                                                                                          tgtgGCGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTc                             >  1:4131506/1‑140 (MQ=255)

                                                                                                               cGTTACAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGAt                        >  1:610913/1‑140 (MQ=255)

                                                                                                                 ttACAAC‑TGGATGAAGAGCGGTAGGTGATGCGTTAAGGTGGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACAGTCAGTTCGGGCTTATTGACGCGTTAGCTTTTCCAGAACg                      >  2:1247964/1‑140 (MQ=255)

                                                                                                                   aCAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGc                    <  1:2453094/140‑1 (MQ=255)

                                                                                                                    cAAC‑TGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCt                   >  1:3373713/1‑140 (MQ=255)

                                                                                                                       actggatGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTc                 >  1:1877926/7‑140 (MQ=255)

                                                                                                                         tggatGAAGAGAGGTCGGTTATCCGTTCCGGTTGAGGCGGCGCAGGCTCATCCCCATCTGACCAACGCGTAGAGGGGAATGCCCGACTTAAACGTCAGTACGGGATTATTTACGCGTTAGTTTTTCCCGATCGGCTTCaa               <  2:4138749/136‑1 (MQ=255)

                                                                                                                          ggatGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAAt              <  1:100534/137‑1 (MQ=255)

                                                                                                                              gAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCg          <  1:2522584/140‑1 (MQ=255)

                                                                                                                                agagCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCt        <  1:2486791/140‑1 (MQ=255)

                                                                                                                                agagCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCt        >  1:267584/1‑140 (MQ=255)

                                                                                                                                agagCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCt        <  1:5009480/140‑1 (MQ=255)

                                                                                                                                agagCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCt        <  1:3141510/140‑1 (MQ=255)

                                                                                                                                     ggTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCTTCAGCGCGACGGGGAGAGGGGTATGTCCGAATTAACCGTCATTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGAtgt   >  2:1425636/1‑138 (MQ=255)

                                                                                                                                      gTAGGTTATACGTTAAGATTGAGGCGGCGCTGGCTGATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGAGTATTTAGGCGTTAGTTTTTCCAGATCGGCTTCATTCTCGCTGACCtt  >  2:225402/1‑140 (MQ=255)

CAAAGGCGTTGTTTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAAC‑TGG‑TGAAGAGCGGTAAGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTT  >  NZ_CP025268/183315‑183586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`