| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,237,632 | A→G | *240* (TAA→TAG) | sanA → | outer membrane permeability protein SanA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,237,632 | 0 | A | G | 99.4% | 595.7 / NA | 177 | *240* (TAA→TAG) | sanA | outer membrane permeability protein SanA |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (74/101); total (75/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TTTTTAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAATTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAACCGG > NZ_CP025268/2237496‑2237761 | tttttACACGTTAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTa < 2:764086/140‑1 (MQ=255) ttttAAACGTGATCCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTAt < 2:3602195/140‑1 (MQ=255) ttttAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTAt < 1:573785/140‑1 (MQ=255) ttttAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTAt > 1:1851544/1‑140 (MQ=255) ttAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATgg > 1:4129903/1‑140 (MQ=255) ttAAACGTGAACCGCGTTTTTCAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATgg > 2:832653/1‑140 (MQ=255) cGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTa < 1:1030337/140‑1 (MQ=255) gAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACGGGAAGATGCGCAGGGGTATCCCGCGGGCACGCCCGAACAGTTGCTTGAATTACAAGAGAAACAAGGAAAGTAGTTATGGATGTagag < 2:4661023/140‑1 (MQ=255) gAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTAcag > 1:4936/1‑140 (MQ=255) aaCCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTAcagc > 2:3196401/1‑140 (MQ=255) ttttttAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGttttt > 2:326102/1‑140 (MQ=255) tttAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGt > 1:1633434/1‑140 (MQ=255) ggCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTg < 1:2176300/140‑1 (MQ=255) gCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACCTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGc < 2:3065375/140‑1 (MQ=255) cGCTGGTCCCTATTCCCGCTATGCACCAGGTACCGGCAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCg < 1:2633600/140‑1 (MQ=255) ggTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑tttt < 1:715734/140‑1 (MQ=255) tATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TCTTTTTCCt < 2:3616195/140‑1 (MQ=255) gCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGc < 2:3165263/121‑1 (MQ=255) gCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGc > 1:3165263/1‑121 (MQ=255) gCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCg > 2:4530453/1‑140 (MQ=255) gCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCg > 1:4071085/1‑140 (MQ=255) aTGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGata > 1:3537667/1‑140 (MQ=255) aTGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGata > 1:1042313/1‑140 (MQ=255) gCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATAtt > 1:1677093/1‑140 (MQ=255) gCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATAtt > 1:4582168/1‑140 (MQ=255) ggTACCGGAAGATGCGCAGGGATATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGttt > 1:1529953/1‑140 (MQ=255) gTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTc > 2:4693814/1‑140 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 2:1151059/140‑1 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 2:3902173/140‑1 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 2:4995793/140‑1 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 1:669738/140‑1 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg > 1:1189554/1‑140 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg > 1:1222760/1‑140 (MQ=255) aGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGc < 1:796488/140‑1 (MQ=255) tGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTCGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATg > 1:3704992/1‑140 (MQ=255) tGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATg > 1:191531/1‑140 (MQ=255) tGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGGTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATg > 2:1940319/1‑140 (MQ=255) cgcAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGa < 2:403543/140‑1 (MQ=255) cgcAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGa > 2:1410905/1‑140 (MQ=255) ggggTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTCGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAgg > 1:1348847/1‑140 (MQ=255) gggTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGc < 2:4268305/140‑1 (MQ=255) gggTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATAGTTTGTTTCCGCGAAGCATGGAAAGGc > 2:4392817/1‑140 (MQ=255) tCCCGCCGTCACCCCCGACCAGTTACTTGACTTACAAAAGAAACAAGGCAAGTCGTTATGGCTGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGgcg > 2:480597/1‑140 (MQ=255) tCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTggtg > 1:3842504/1‑138 (MQ=255) ccgccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGgcgcg < 2:2737610/140‑1 (MQ=255) ccgccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGgcgcg < 1:2265851/140‑1 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTg < 2:4854206/80‑1 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTg > 1:4854206/1‑80 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAg > 2:1548720/1‑140 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAg > 2:1549962/1‑140 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAg > 1:720086/1‑140 (MQ=255) cgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAgg < 1:3255619/140‑1 (MQ=255) tCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcg < 2:1259874/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGGTATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc > 1:4659495/1‑140 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc < 1:3490438/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc < 2:2139255/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc < 2:4308536/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc < 2:594865/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc < 1:3491780/140‑1 (MQ=255) acacCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGcgcg < 2:117672/140‑1 (MQ=255) acacCCGAACAGTTACTTGAATTACAAAAGAAAAAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGcgcg < 2:3947904/140‑1 (MQ=255) cgcccGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGa < 1:3391982/138‑1 (MQ=255) aaCAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATa > 2:1626989/1‑140 (MQ=255) aaCAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATa > 2:3348577/1‑140 (MQ=255) caattACTTGAATCCCAAAACAACCAAGGAAAATAGTTATCGATATACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCACAATCCCGATATTTTGTTTCCGCGAAGCCTGGAAAGGCTGGCGCGCAGGCGCCATTGATaaa < 2:4168087/137‑1 (MQ=255) cAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 2:1218573/140‑1 (MQ=255) cAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 1:4324167/140‑1 (MQ=255) cAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 2:2514792/140‑1 (MQ=255) aGTTACTTGAATTACAAAAGAACCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCGTTTTTTTTCCTTATCCCGATATTTAGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 2:4026864/140‑1 (MQ=255) aGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAAc < 2:607198/140‑1 (MQ=255) ttACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACgg > 2:897831/1‑140 (MQ=255) ttACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACgg > 1:3020036/1‑140 (MQ=255) ttACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACgg > 1:2333123/1‑140 (MQ=255) ttACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATGGATAAACgg > 1:3697119/1‑140 (MQ=255) aCTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGt > 2:251962/1‑140 (MQ=255) tGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTaa > 2:3165688/1‑140 (MQ=255) aTTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTaaaaa < 2:213610/140‑1 (MQ=255) aCAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGc < 2:1845639/140‑1 (MQ=255) aaaaGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCAc > 1:4432446/1‑140 (MQ=255) aGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCgg < 1:2551251/140‑1 (MQ=255) aGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCgg < 1:3544137/140‑1 (MQ=255) aGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCgg < 1:2551489/140‑1 (MQ=255) aGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCgg < 1:1929458/140‑1 (MQ=255) aGAAACAAGGAAAGTAATTATGGATGTACAGCAGTTCTTTGTCGTTGCCG‑TTTTTTTCCATATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCgg < 1:2850613/140‑1 (MQ=255) gAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGa < 1:1382845/140‑1 (MQ=255) aaaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGaa < 1:4144753/140‑1 (MQ=255) aaaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGaa < 1:4437994/140‑1 (MQ=255) aaaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑‑TTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:2208537/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGGGGGTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:211790/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 2:3704992/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:1151520/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:4008273/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:4461235/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:3126699/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:2104441/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:849646/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:1703650/140‑1 (MQ=255) aCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAcc > 1:1632890/1‑140 (MQ=255) aaGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TGTTTTTCCTTATCCCGTTATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGCTTGATAAACGGGTTACAAATGCCCCGGAACCgt < 2:2871057/140‑2 (MQ=255) aaGGAAAGTAGTTATGCATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTCTTTCCTTATCCCGATCTTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAACCGGGTTAAAAATGCACCGGAACCgg < 2:2682512/140‑1 (MQ=255) | TTTTTAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAATTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAACCGG > NZ_CP025268/2237496‑2237761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |