BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	28,270	T→C	intergenic (+62/‑105)	rihC → / → dapB	ribonucleoside hydrolase RihC/4‑hydroxy‑tetrahydrodipicolinate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	28,270	0	T	C	100.0%	694.9 / NA	208	intergenic (+62/‑105)	rihC/dapB	ribonucleoside hydrolase RihC/4‑hydroxy‑tetrahydrodipicolinate reductase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (105/103); total (105/103)

Only 100 of 209 total aligned reads displayed.

ACAGGTGGCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCTCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCAAACATCCGCGTTGCCAT  >  NZ_CP025268/28136‑28403

aCAGGTGGCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTCAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGtt                                                                                                                                  <  2:4085444/140‑1 (MQ=255)

  aGGTGGCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCGTGCAGGCATTCATCGACTCCTGCCTTTCACTGATATCCCTGCCTGTTTa                                                                                                                                >  2:3178555/1‑140 (MQ=255)

   ggTGGCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTAt                                                                                                                               >  2:4736376/1‑140 (MQ=255)

       gaaTTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCAtt                                                                                                                           <  2:4513254/138‑1 (MQ=255)

       gCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCAtt                                                                                                                           >  1:423863/1‑140 (MQ=255)

       gCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCAtt                                                                                                                           >  1:2814929/1‑140 (MQ=255)

       gCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCAtt                                                                                                                           >  2:2051851/1‑140 (MQ=255)

       gCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAAGTGCCGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAAGCATTAATCGACTCATGCCTTTCACTGGTATCCATACCTGTTTATCAtt                                                                                                                           >  2:234539/1‑140 (MQ=255)

         aTTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTaa                                                                                                                         >  2:2141552/1‑140 (MQ=255)

          ttGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAAt                                                                                                                        <  1:2116336/140‑1 (MQ=255)

            ggATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAAttt                                                                                                                      <  1:648465/140‑1 (MQ=255)

              aTCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCt                                                                                                                    >  2:2594078/1‑140 (MQ=255)

              aTCTGGATGGGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCAGTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCt                                                                                                                    <  1:2885556/140‑1 (MQ=255)

                     tgtgAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATCCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATc                                                                                                             <  1:3452407/140‑1 (MQ=255)

                      gtgAACGGCTTCCAGCAGTGCGTGGCTGAGGTGCTGGCTCTGGCGTCGTCACCCGCCACATGTTATTGGCCTGCAGTCATTCATCGCCTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCa                                                                                                            <  2:1328561/140‑1 (MQ=255)

                      gtgAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCa                                                                                                            <  1:3171558/140‑1 (MQ=255)

                      gtgAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCa                                                                                                            <  2:3273783/140‑1 (MQ=255)

                         aaaGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCCTTAATTTCTAATTATCAGCg                                                                                                         >  2:1296178/1‑140 (MQ=255)

                             gCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGtttt                                                                                                     >  2:1270341/1‑140 (MQ=255)

                                 ccAGCAGTGGGTGGCTGAGGTGCTGACTCTGGCGTCGTAACCGGTCACATGTTATGGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGAAATCCCTCCCTGTTTATCATTAATTTCTAATTAACAGCGTTTTtggc                                                                                                 >  2:1060093/1‑140 (MQ=255)

                                 ccAGCAGTGGGTGGCGGAGGTGCGGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTAGCATTAATTTCGAATTATCAGCGTTTTtggc                                                                                                 >  2:2457772/1‑140 (MQ=255)

                                    gcagTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTtggctgg                                                                                              <  2:585816/140‑1 (MQ=255)

                                    gcagTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTtggctgg                                                                                              <  1:2679357/140‑1 (MQ=255)

                                       gtgggtggCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTggcgg                                                                                           >  2:2259449/1‑140 (MQ=255)

                                        tgggtggCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTggcggc                                                                                          >  2:4983742/1‑140 (MQ=255)

                                        tgggtggCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTggcggc                                                                                          >  2:756850/1‑140 (MQ=255)

                                          ggtggCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGt                                                                                        >  2:1505715/1‑140 (MQ=255)

                                          ggtggCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGt                                                                                        >  2:1105081/1‑140 (MQ=255)

                                          ggtggCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGt                                                                                        >  1:1956918/1‑140 (MQ=255)

                                            tggCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAg                                                                                      <  2:5030389/140‑1 (MQ=255)

                                              gCTGAGGTGCTGGCTCTAGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCg                                                                                    <  2:1829648/140‑1 (MQ=255)

                                                  gggTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATgc                                                                                <  2:4871663/139‑1 (MQ=255)

                                                   ggTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATgcg                                                                               <  1:2999555/140‑1 (MQ=255)

                                                     tGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCt                                                                             >  2:920348/1‑140 (MQ=255)

                                                        tGGCTCTGGCGTCGTAACGTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGt                                                                          <  2:3641296/140‑1 (MQ=255)

                                                        tGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGt                                                                          <  1:1000915/140‑1 (MQ=255)

                                                        tGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCACTCATCGACTCATGCCTTTCACTGATCTCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTCTTTGGCTGGCGGCGTAGCGATGCGCTGGt                                                                          <  2:2845708/140‑1 (MQ=255)

                                                         ggCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGtt                                                                         >  1:568549/1‑140 (MQ=255)

                                                         ggCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGtt                                                                         <  2:4477068/140‑1 (MQ=255)

                                                         ggCTCTGGCGTCGTAACCTGTCACATGTTATTGGCAGGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGtt                                                                         <  1:1892557/140‑1 (MQ=255)

                                                         ggCTATGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGtt                                                                         <  2:4517075/140‑1 (MQ=255)

                                                           ctctGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTAc                                                                       <  2:4182556/140‑1 (MQ=255)

                                                             ctGGCGTCGTAACCTGTCACATGTTATGGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTActc                                                                     <  2:3422147/140‑1 (MQ=255)

                                                              tGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTActct                                                                    >  2:3851567/1‑140 (MQ=255)

                                                               ggCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTg                                                                   >  1:1248740/1‑140 (MQ=255)

                                                               ggCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTg                                                                   >  1:131807/1‑140 (MQ=255)

                                                               ggCGTCGTAACCTGCCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTg                                                                   >  1:842499/1‑140 (MQ=255)

                                                                       aaCCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGt                                                           <  1:2495320/140‑1 (MQ=255)

                                                                       aaCCTGTCACATGTTATTGCCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGt                                                           <  2:3958057/140‑1 (MQ=255)

                                                                          cTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTa                                                        <  1:3966236/140‑1 (MQ=255)

                                                                           tGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTAt                                                       >  1:1945491/1‑140 (MQ=255)

                                                                             tCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGc                                                     >  2:4533836/1‑140 (MQ=255)

                                                                             tCACATGGTATTGGCATGCAGTCATTCATCGACTCAGGCCTTTCACTGAGATCCGACCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGACTGGCGGCGTATCAATGCGCTCGTTAATCTGTAAACGGTCTATGc                                                     >  2:4421543/1‑140 (MQ=255)

                                                                                    ttATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTaa                                              <  1:4200956/140‑1 (MQ=255)

                                                                                    ttATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTaa                                              <  1:1662600/140‑1 (MQ=255)

                                                                                      aTTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACa                                            >  1:719851/1‑140 (MQ=255)

                                                                                       ttGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACaa                                           <  1:4484430/140‑1 (MQ=255)

                                                                                       ttGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACaa                                           <  1:2141552/140‑1 (MQ=255)

                                                                                       ttGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACaa                                           >  2:3096216/1‑140 (MQ=255)

                                                                                       ttGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACaa                                           >  2:1169600/1‑140 (MQ=255)

                                                                                       ttGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGGCTATGCAAATTAACaa                                           >  2:4903875/1‑140 (MQ=255)

                                                                                           cATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAaga                                       >  1:463793/1‑140 (MQ=255)

                                                                                           cATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCA‑TAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAagag                                      <  2:432771/140‑1 (MQ=255)

                                                                                            aTGCAGTCATTCATCGTCTCATGCCTTTCACTGCTCTCCCTCCCTGTTTCTCGTTACTTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTCCTCTGAAAACGGTCTATGCAAATTAACAAAagag                                      <  2:5067718/140‑1 (MQ=255)

                                                                                            aTGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAagag                                      >  2:968091/1‑140 (MQ=255)

                                                                                            aTGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAagag                                      <  2:3675439/140‑1 (MQ=255)

                                                                                            aTGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAagag                                      >  2:391990/1‑140 (MQ=255)

                                                                                              gccgTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGaa                                    <  2:1885393/137‑1 (MQ=255)

                                                                                              gCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACTGTCTATGCAAATTAACAAAAGAGaa                                    <  2:4575924/140‑1 (MQ=255)

                                                                                              gCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGaa                                    <  2:3343084/140‑1 (MQ=255)

                                                                                              gCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGaa                                    >  1:3308963/1‑140 (MQ=255)

                                                                                               cAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAAt                                   >  1:1420811/1‑140 (MQ=255)

                                                                                               cAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAAt                                   >  1:2617674/1‑140 (MQ=255)

                                                                                               cAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAAt                                   >  1:4167830/1‑140 (MQ=255)

                                                                                                   cattcatCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCt                               <  1:391990/140‑1 (MQ=255)

                                                                                                    attcatCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTa                              >  1:1513882/1‑140 (MQ=255)

                                                                                                    attcatCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTa                              >  1:4839675/1‑140 (MQ=255)

                                                                                                       catCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGc                           >  1:3761682/1‑140 (MQ=255)

                                                                                                        gtCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCa                          <  2:4827649/139‑1 (MQ=255)

                                                                                                        atCGTCTCATGCCTTTCACTGATATCCCTCCCTGGTTATCATTAATTTCTACTTATCCGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACGAAAGAGAATAGCTATGCa                          <  2:3082064/140‑1 (MQ=255)

                                                                                                        atCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCa                          <  2:1431006/140‑1 (MQ=255)

                                                                                                        atCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCa                          <  2:1351313/140‑1 (MQ=255)

                                                                                                        atCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCa                          <  1:3616102/140‑1 (MQ=255)

                                                                                                        atCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGGAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCa                          <  1:1226017/140‑1 (MQ=255)

                                                                                                        atCGACTCATGCCTTTCACTGATACCCCTCCCTGTTTATCATTAATTTCTAGTTATCAGCGTTTTTGGCTGGCGGCGTAGCAATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTAGGCa                          <  2:2791998/140‑1 (MQ=255)

                                                                                                         tCGACTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCat                         >  1:926682/1‑140 (MQ=255)

                                                                                                            aCTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTTAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCatgat                      >  1:4913349/1‑140 (MQ=255)

                                                                                                            aCTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCatgat                      >  2:1702480/1‑140 (MQ=255)

                                                                                                            aCTCATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTGTGGCTGGCGGCGTAGCGATGCGCTGGTGACTCTGAAAACGGGCTAGGCAAAGTAACAGAAGAGAATAGCTATGCatgag                      >  2:4916420/1‑139 (MQ=255)

                                                                                                            aCTCATGCCTTGCACTGATGTGCCTCCCTGTTTATCATTAATTTCTAATTATGAGCGTTTTTGGCGGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCGATGCAAATTAACAAAAGAGAATAGCTATGCatgat                      >  2:4916490/1‑140 (MQ=255)

                                                                                                               cATGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCa                   <  1:4808999/140‑1 (MQ=255)

                                                                                                                aTGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATTCATGATGCaa                  >  1:3962509/1‑140 (MQ=255)

                                                                                                                aTGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCaa                  >  2:458644/1‑140 (MQ=255)

                                                                                                                aTGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCaa                  >  1:1738456/1‑140 (MQ=255)

                                                                                                                aTGCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCaa                  >  2:2964011/1‑140 (MQ=255)

                                                                                                                  gCCTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCAAAc                >  2:5032801/1‑140 (MQ=255)

                                                                                                                   ccTTTCACTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCAAACa               <  1:2038556/140‑1 (MQ=255)

                                                                                                                         aCTGATATCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCAAACATCcgcg         <  1:4507960/140‑1 (MQ=255)

                                                                                                                               atCCCTCCCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCAAACATCCGCGTTGCCa   >  2:1802201/1‑140 (MQ=255)

                                                                                                                                tccctcccTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCAAACATCCGCGTTGCCAt  >  2:375050/1‑140 (MQ=255)

ACAGGTGGCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAACCTGTCACATGTTATTGGCATGCAGTCATTCATCGACTCATGCCTTTCACTGATATCCCTCTCTGTTTATCATTAATTTCTAATTATCAGCGTTTTTGGCTGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACGGTCTATGCAAATTAACAAAAGAGAATAGCTATGCATGATGCAAACATCCGCGTTGCCAT  >  NZ_CP025268/28136‑28403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`