BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,917,410	T→C	S17P (TCG→CCG)	barA →	two‑component sensor histidine kinase BarA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,917,410	0	T	C	100.0%	990.1 / NA	292	S17P (TCG→CCG)	barA	two‑component sensor histidine kinase BarA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (163/129); total (163/129)

Only 100 of 294 total aligned reads displayed.

GTGCGTCGTTTTGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCATCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCATGAGCC  >  NZ_CP025268/2917274‑2917545

 tGCGTCGTTTTGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGAc                                                                                                                                     <  1:364243/140‑1 (MQ=255)

  gCGTCGTTTTGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGAcc                                                                                                                                    <  1:283593/140‑1 (MQ=255)

  gCGTCGGTTTGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCATAATTGTCCCATAACGGAACTCCATGACCATCTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGAcc                                                                                                                                    <  2:4520606/140‑1 (MQ=255)

     tcgtTTTGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTc                                                                                                                                 <  1:736523/140‑1 (MQ=255)

      cgtTTTGCAGAGTAGAATTGCGCCAGTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTcc                                                                                                                                >  2:4593365/1‑140 (MQ=255)

          ttGCCGAGTACAATTGCGCCATTGGAGAGACTTTCTCAATTTAACAGTGTCACCTTAAAAGCACCATAACGAAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGGATCTGGTCCGGGCACCGACCGTCCGTac                                                                                                                            <  2:288118/140‑2 (MQ=255)

          ttGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTAt                                                                                                                            <  2:223287/140‑1 (MQ=255)

          ttGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGACTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTAt                                                                                                                            <  2:1359196/140‑1 (MQ=255)

              agagTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGt                                                                                                                        <  1:3877199/140‑1 (MQ=255)

              agagTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGt                                                                                                                        <  1:3990705/140‑1 (MQ=255)

                  tAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTAt                                                                                                                    >  2:901964/1‑140 (MQ=255)

                  tAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTAt                                                                                                                    >  2:844102/1‑140 (MQ=255)

                          cgcCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCGTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGt                                                                                                            >  2:5009719/1‑140 (MQ=255)

                          cgcCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGt                                                                                                            >  2:2508816/1‑140 (MQ=255)

                          cgcCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGt                                                                                                            >  1:4873481/1‑140 (MQ=255)

                          cgcCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCACGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGt                                                                                                            >  1:3730466/1‑140 (MQ=255)

                            ccATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTAt                                                                                                          >  2:4559895/1‑140 (MQ=255)

                            ccATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTAt                                                                                                          >  1:641783/1‑140 (MQ=255)

                               ttGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCtt                                                                                                       >  2:1980944/1‑140 (MQ=255)

                                    gagaCTTTCTCAATTTGACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTtcg                                                                                                  <  2:4735609/140‑1 (MQ=255)

                                    gagaCTTTCTCAATTTAACAGTGTGACCTTAATGGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCGCGCATGATGATTCTGATCCTGTCACCGACCGTCCTTATTGGGTTATTGCTGAGTATCTTTTtcg                                                                                                  >  2:4309095/1‑140 (MQ=255)

                                         tttCTCAATTTAACAGTGTGGCCTTAATTGGCCCATGACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTg                                                                                             <  1:5054011/140‑1 (MQ=255)

                                         tttCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTg                                                                                             <  1:2397334/140‑1 (MQ=255)

                                          ttCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACTGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGc                                                                                            <  1:4422492/140‑1 (MQ=255)

                                          ttCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGc                                                                                            <  2:3915406/140‑1 (MQ=255)

                                           tctcAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCa                                                                                           >  2:3396346/1‑140 (MQ=255)

                                           cctcAATTTAACAGTGTGACCCAAATACCCCCATAACGCAACTCCATGACCAACTACAGCCTGCGCGCACGCATGAAGATTCCGACCCTGGCACCGACCGTCCTTATTGGGCGAGTGCTGAGTATCCTTTTCGTCGTGCa                                                                                           <  1:2891897/139‑1 (MQ=255)

                                            ctcAATTTCACAGTGTCACCTTACTTGCCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCAt                                                                                          <  1:3025720/140‑1 (MQ=255)

                                            ctcAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCAt                                                                                          <  1:338229/140‑1 (MQ=255)

                                            ctcAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCAt                                                                                          <  1:759537/140‑1 (MQ=255)

                                            ctcAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCAt                                                                                          <  1:2745061/140‑1 (MQ=255)

                                            ctcAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCAt                                                                                          <  2:1418407/140‑1 (MQ=255)

                                            ctcAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCAt                                                                                          <  1:1736085/140‑1 (MQ=255)

                                             tcAATTTAACAGTGTGACGTTAATTGTCCCATACCGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGTTCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATc                                                                                         <  2:3614703/140‑1 (MQ=255)

                                              cAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCg                                                                                        <  1:4804863/140‑1 (MQ=255)

                                                  ttAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCtat                                                                                    >  1:3443447/1‑140 (MQ=255)

                                                         tgtgACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACt                                                                             >  2:1172468/1‑140 (MQ=255)

                                                          gtgACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACtt                                                                            >  1:3837833/1‑140 (MQ=255)

                                                           tgACCTTAATTGTCCCATAACGTAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTg                                                                           >  2:5092362/1‑140 (MQ=255)

                                                           tgACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTg                                                                           >  2:3208752/1‑140 (MQ=255)

                                                           tgACCTTAATCGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGCTGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTg                                                                           >  2:2610861/1‑140 (MQ=255)

                                                             aCCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCa                                                                         <  2:1027854/140‑1 (MQ=255)

                                                                   aTTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGGTGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGGCa                                                                   >  2:2728459/1‑140 (MQ=255)

                                                                   aTTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCa                                                                   >  1:166715/1‑140 (MQ=255)

                                                                   aTTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCa                                                                   >  1:2341021/1‑140 (MQ=255)

                                                                   aTTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGGTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCa                                                                   >  2:3033249/1‑140 (MQ=255)

                                                                       tCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTg                                                               >  1:182135/1‑140 (MQ=255)

                                                                        cccATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTgg                                                              >  1:3154387/1‑140 (MQ=255)

                                                                         ccATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGa                                                             >  1:1313001/1‑140 (MQ=255)

                                                                         ccATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGa                                                             >  2:3713957/1‑140 (MQ=255)

                                                                            tAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGa                                                          >  1:4554720/1‑140 (MQ=255)

                                                                            tAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGa                                                          >  1:913217/1‑140 (MQ=255)

                                                                                   aCTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGt                                                   <  1:4625050/140‑1 (MQ=255)

                                                                                   aCTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGt                                                   <  1:110848/140‑1 (MQ=255)

                                                                                   aCTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGt                                                   >  2:3136142/1‑140 (MQ=255)

                                                                                     tCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGc                                                 <  1:2626517/140‑1 (MQ=255)

                                                                                        aTGACCAACTTCAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAg                                              <  1:1226838/140‑1 (MQ=255)

                                                                                        aTGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAg                                              <  1:4919667/140‑1 (MQ=255)

                                                                                        aTGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAg                                              <  2:1511089/140‑1 (MQ=255)

                                                                                        aTGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAg                                              <  2:2378536/140‑1 (MQ=255)

                                                                                         tGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGc                                             >  1:4726526/1‑140 (MQ=255)

                                                                                               aCTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCattatt                                       >  1:3558301/1‑140 (MQ=255)

                                                                                               aCTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCattatt                                       >  2:785030/1‑140 (MQ=255)

                                                                                                 tACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGa                                     <  1:2944241/140‑1 (MQ=255)

                                                                                                     gCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCg                                 >  1:298718/1‑140 (MQ=255)

                                                                                                      ccTGCGCGCACGCACGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGATCCGc                                >  1:688201/1‑140 (MQ=255)

                                                                                                        tGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCtt                              <  1:2508816/140‑1 (MQ=255)

                                                                                                        tGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCtt                              <  1:3494776/140‑1 (MQ=255)

                                                                                                        tGCGCGCACGCATGATGATTCCGATCCTGTCCCCGACCCTCCTTATTTGTTTATTGCTGAGTATCGTTTTCGTCGTGCATCTCTACAAATACTTGCAGCGTCAACTGGTAGATGCCGGTGCCCGCATTATTGAGCCGCtt                              <  2:2577039/140‑1 (MQ=255)

                                                                                                          cgcgcACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGt                                                   <  1:4281000/117‑1 (MQ=255)

                                                                                                          cgcgcACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTTGCCGCAGTATTGCGCCGCTTGc                            >  2:268287/1‑140 (MQ=255)

                                                                                                          cgcgcACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGGATTATTGAGCCGCTTGc                            >  1:1124747/1‑140 (MQ=255)

                                                                                                          cgcgcACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGc                            >  1:1979462/1‑140 (MQ=255)

                                                                                                          cgcgcACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACGGGAAGATGCCGGCGCCAGCATTATTGAGCCGCTTGc                            >  1:4037340/1‑140 (MQ=255)

                                                                                                          cgcgcACGCATGATGATTCTGATCCTGGCACCGACCGTCCGTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGc                            >  2:1199083/1‑140 (MQ=255)

                                                                                                          cgcgcACGCATGATGATTCTGATCCTAGCACCGACCGTCCTTATTGGTGTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTTAGCCGCTTGc                            >  1:789980/1‑140 (MQ=255)

                                                                                                           gcgcACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCa                           >  1:1115346/1‑140 (MQ=255)

                                                                                                             gcacgcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGt                         <  2:1139591/140‑1 (MQ=255)

                                                                                                             gcacgcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGt                         <  2:1315704/140‑1 (MQ=255)

                                                                                                             gcacgcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGt                         <  2:3250623/140‑1 (MQ=255)

                                                                                                              cacgcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCATCAGTATTGAGCCGCTTGCAGtt                        >  1:15702/1‑140 (MQ=255)

                                                                                                               acgcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGttt                       <  1:1415066/140‑1 (MQ=255)

                                                                                                               acgcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGttt                       <  2:4130138/140‑1 (MQ=255)

                                                                                                                cgcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTc                      >  2:1725506/1‑140 (MQ=255)

                                                                                                                 gcaTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCt                     <  1:3220524/140‑1 (MQ=255)

                                                                                                                  caTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTCTCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGCGCCGCTTGCAGTTTCTa                    <  2:4885224/140‑1 (MQ=255)

                                                                                                                  caTGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTa                    <  1:2238050/140‑1 (MQ=255)

                                                                                                                   atgatgATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTAc                   <  2:2067212/140‑1 (MQ=255)

                                                                                                                    tgatgaTTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACt                  >  2:595993/1‑140 (MQ=255)

                                                                                                                           tCTGATCCTGGCACGGACCGTCCTTATTGGTTTATTGCTGAGTATCTTGTTCGTCGTGCATCGCTATAAGGACTTGCAGCGTGAAGTGGAAGATGCCGGTGCTGGCATTATTCAGCAGCTTGCGGTCTGTACTGAATATg           >  2:4431656/1‑140 (MQ=255)

                                                                                                                           tCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATg           >  1:3900124/1‑140 (MQ=255)

                                                                                                                             tGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGc         >  2:4848143/1‑140 (MQ=255)

                                                                                                                             tGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGc         >  2:3464183/1‑140 (MQ=255)

                                                                                                                               aTCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCGGGTGGCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCAt       >  2:379379/1‑140 (MQ=255)

                                                                                                                               aTCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCAt       >  1:2083388/1‑140 (MQ=255)

                                                                                                                                tCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCATg      >  1:2207458/1‑140 (MQ=255)

                                                                                                                                 ccTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCATGa     <  1:3188420/140‑1 (MQ=255)

                                                                                                                                   tGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCATGAGc   >  1:1846929/1‑140 (MQ=255)

                                                                                                                                    ggCACCTACCGTCCTTATTGGTTTATTGTTGTGTATCTTTTTCGTCTTGCATCGCTATAACGTCTTGCAGCGCCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGTCATGAGcc  >  2:2100075/1‑140 (MQ=255)

                                                                                                                                    ggCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTa                    <  1:1174840/122‑1 (MQ=255)

GTGCGTCGTTTTGCAGAGTAGAATTGCGCCATTGGCGAGACTTTCTCAATTTAACAGTGTGACCTTAATTGTCCCATAACGGAACTCCATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCATCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCATGAGCC  >  NZ_CP025268/2917274‑2917545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`