Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 489,335 T→C *176* (TAA→TAG)  priC ← primosomal replication protein N''

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP025268489,3350TC100.0% 939.0 / NA 277*176* (TAA→TAG) priCprimosomal replication protein N''
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (182/95);  total (182/95)

Only 100 of 277 total aligned reads displayed.

ATAATCACGCTTTACAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGTTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGG  >  NZ_CP025268/489199‑489470
                                                                                                                                        |                                                                                                                                       
aTAATCACGCTTTACAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAg                                                                                                                                      <  1:4559198/140‑1 (MQ=255)
aTAATCACGCTTTACAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAg                                                                                                                                      <  1:662112/140‑1 (MQ=255)
aTAATCACGCTTTACAATATCCAGCGCGCGCAGCACAGTACTGGAAGGGATCTGATTTTCCTCCAGCAGCCAAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAg                                                                                                                                      <  2:1361116/140‑1 (MQ=255)
        gCTTTACAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCCGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTaa                                                                                                                              <  1:2852085/140‑1 (MQ=255)
          tttACAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAAc                                                                                                                            >  1:452739/1‑140 (MQ=255)
            tgcAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTAGACATCGTCAGGGGCATTTTCCAGTGATATATTCTCTCCATTACTAGCGGGTTAAAcgc                                                                                                                          >  1:2845706/3‑140 (MQ=255)
            tACAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAAcgc                                                                                                                          >  1:2577731/1‑140 (MQ=255)
             aCAATATCCCGCGCGCGCAGCACGGTACTGGCAGGGATCTGACTTTCCTTCAGCAGCACAATCATATCGACAGCCAGTTTGACATCGTTAGGGGCATTTTCCAGTGACATATTCTCGCCATTGCTAGCGGGTTAAAcgcg                                                                                                                         <  1:3055895/140‑1 (MQ=255)
             aCAATATCCAGCGCGCGCAGCACGGTGCTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAAcgcg                                                                                                                         >  2:1622959/1‑140 (MQ=255)
                  atCCAGCGCGCGCAGCACGGTACTGGCAGGGGTCTGATTGTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCGAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAAc                                                                                                                    >  1:1833641/1‑140 (MQ=255)
                    ccAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCt                                                                                                                  >  2:4484876/1‑140 (MQ=255)
                      aGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGt                                                                                                                >  2:4227213/1‑140 (MQ=255)
                        cgcgcgcAGCACGGTACTGGCAGGGATCTGATTTTCCTCCTGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGttt                                                                                                              >  2:1495381/1‑140 (MQ=255)
                        cgcgcgcAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGttt                                                                                                              >  2:4648721/1‑140 (MQ=255)
                        cgcgcgcAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGttt                                                                                                              >  2:3332184/1‑140 (MQ=255)
                             gcagcaCGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAg                                                                                                                                      <  2:3018703/111‑1 (MQ=255)
                             gcagcaCGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGAt                                                                                                         >  2:208139/1‑140 (MQ=255)
                             gcagcaCGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTAAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTCCACGCGCTAACCTGTTTTCGAt                                                                                                         >  1:3327685/1‑140 (MQ=255)
                                      tACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAg                                                                                                <  1:2515497/140‑1 (MQ=255)
                                      tACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAg                                                                                                >  1:3332516/1‑140 (MQ=255)
                                      tACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAg                                                                                                >  2:5637/1‑140 (MQ=255)
                                         tGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAgcgc                                                                                             >  1:1513841/1‑140 (MQ=255)
                                           gCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAg                                                                                                >  2:2668280/1‑135 (MQ=255)
                                           gCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCAt                                                                                           >  1:3563127/1‑140 (MQ=255)
                                           gCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTGTCGATTTTTTCCAGCGCAt                                                                                           >  2:4104218/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCACATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  2:4922394/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGGCAGTTGGACATCGTCAGGGGCATCTTCCAGTGACATATTCTCTCCATTGCTAGCGTGTTAAACGCGGGAACCTGTTTTCGATTTTTTCCAGCGGATggcgg                                                                                      >  2:4392427/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTATCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCCCATggggg                                                                                      >  1:2048246/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCTCTACCCTGTTTTCGATTTTTTCCAGCGCAtggtgg                                                                                      >  1:3471899/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  2:212483/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  2:2512788/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  2:2428608/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  2:2343046/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:1062580/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  2:3115458/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  2:3360817/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:1105751/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:3420198/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:3304219/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:2097452/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:2123653/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:3012344/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:2982163/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:2388854/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACAGATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCGGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:2676622/1‑140 (MQ=255)
                                                gATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGGTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATggcgg                                                                                      >  1:3591258/1‑140 (MQ=255)
                                                gATCTGACTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTGTTCGATTTTTTCCAGCGGATgtcgg                                                                                      >  2:1307884/1‑140 (MQ=255)
                                                  tCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCa                                                                                    >  1:3876775/1‑140 (MQ=255)
                                                   cTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAg                                                                                   <  1:2657668/140‑1 (MQ=255)
                                                   cTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAg                                                                                   <  1:1410957/140‑1 (MQ=255)
                                                   cTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAg                                                                                   <  2:3296113/140‑1 (MQ=255)
                                                     gATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCg                                                                                 >  1:3222387/1‑140 (MQ=255)
                                                     gATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGGTTTCGATTTTTTCCAGCGCCTGGCGGCAGCg                                                                                 >  2:2617440/1‑140 (MQ=255)
                                                         ttCCTCCAGCAGCACAAGCAAATCGACAGCCCGTTTGACATCGTCAGGGTCATTTTCCAGTTACATATTCTCTCCATTGCTAGCGGGTTACCCGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGcc                                                                             >  1:801331/1‑140 (MQ=255)
                                                              ccAGCCGCACCAGCCAATCGACAGCCAGTTTGACTCCGTCAGGGTCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGTTTTGAACGCGCCAACCTCCGATCGATTTGGGCCTGCGCATGGCGGCAGCGTGCCAGgcg                                                                        <  2:3458939/140‑1 (MQ=255)
                                                              ccAGCAGCACAATCAAATTGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGATTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGgcg                                                                        <  2:3650317/140‑1 (MQ=255)
                                                              ccAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGgcg                                                                        <  2:1822998/140‑1 (MQ=255)
                                                              ccAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGgcg                                                                        <  1:2613619/140‑1 (MQ=255)
                                                              ccAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATAGTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCGGTTTTCGATTTTTTCCAGCGCAGGGCGGCAGCGTGCCAGgcg                                                                        <  2:384011/140‑1 (MQ=255)
                                                               cagcagCACACTCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTAACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGgcgc                                                                       <  1:3675615/140‑1 (MQ=255)
                                                                agcagcACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGGGTGCCAGgcgcg                                                                      >  2:3619567/1‑140 (MQ=255)
                                                                agcagcACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGgcgcg                                                                      >  1:4065969/1‑140 (MQ=255)
                                                                agcagcACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGgcgcg                                                                      <  2:3923119/140‑1 (MQ=255)
                                                                agcagcACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGgcgcg                                                                      >  2:5098049/1‑140 (MQ=255)
                                                                 gcagcaCAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCACATGGCGGCAGCGTGCCAGgcgcgc                                                                     >  1:100373/1‑140 (MQ=255)
                                                                   agcaCAATCAAATCTACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCtt                                                                   <  1:2457443/140‑1 (MQ=255)
                                                                     cacaATCAAATCGACAGCCAGTTTGACATCGTCCGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTATCGGGTTACACGCGCTAACCTGTTTTCCATTTCTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCa                                                                 <  2:1942428/140‑1 (MQ=255)
                                                                     cacaATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCa                                                                 <  1:514835/140‑1 (MQ=255)
                                                                          tCAAATCGACTGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACCTACTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGc                                                            <  2:2311195/140‑1 (MQ=255)
                                                                          tCAAATCGACACCGAGTTTTACATCGTCCGGGGCATTTGCCAGTGACATACTCTCTCCATTTCTAGCGGGTTAAACGCGCTAACCTGTTCTCGCTTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGc                                                            >  2:737493/1‑140 (MQ=255)
                                                                                  aCAGCCAGTTTGACATCGTCAGGGGTATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGAGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACtt                                                    >  2:4585881/1‑140 (MQ=255)
                                                                                  aCAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAAGCGGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGGGCCAGGCGCGCTTCATAGGCTTCCACtt                                                    >  2:2170937/1‑140 (MQ=255)
                                                                                         gTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATg                                             <  2:1064129/140‑1 (MQ=255)
                                                                                          tttGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGTCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGc                                            <  2:949772/140‑1 (MQ=255)
                                                                                           ttGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCa                                           <  1:3788076/140‑1 (MQ=255)
                                                                                                  cGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTg                                    >  2:713498/1‑140 (MQ=255)
                                                                                                   gTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGc                                   >  1:3697989/1‑140 (MQ=255)
                                                                                                    tCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCt                                  >  2:3149079/1‑140 (MQ=255)
                                                                                                    tCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTGTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCt                                  >  1:3932127/1‑140 (MQ=255)
                                                                                                     cAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTg                                 <  1:923127/140‑1 (MQ=255)
                                                                                                     cAGGGGCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTg                                 <  2:364123/140‑1 (MQ=255)
                                                                                                        gggCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTc                              >  1:462282/1‑140 (MQ=255)
                                                                                                        gggCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCGAACCGGTTGTCGAATTTTTCCACGGCGTGGCGGCAGCGTGCCAGGCGCGCTGCAGAGGCTTCCAATTAACGAGGTGGCGTTTGCTGttg                              >  2:1166461/1‑139 (MQ=255)
                                                                                                         ggCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTcc                             <  1:5026768/140‑1 (MQ=255)
                                                                                                          gCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCa                            <  1:1951068/140‑1 (MQ=255)
                                                                                                          gCATTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCa                            <  1:2263666/140‑1 (MQ=255)
                                                                                                            aTTTTCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACg                          >  2:4149445/1‑140 (MQ=255)
                                                                                                             ttttCCAGTGACATATTTTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCAGGATGCAGCGTTTGCTGTTCCACga                         >  1:2379212/1‑140 (MQ=255)
                                                                                                             ttttCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACga                         >  1:4761174/1‑140 (MQ=255)
                                                                                                              tttCCAGTGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGGTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGGGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACgag                        >  1:1208604/1‑140 (MQ=255)
                                                                                                                     tGACATATTCTCTCCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTc                 >  1:4021012/1‑140 (MQ=255)
                                                                                                                             tctctcCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTGTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGACCGGTCACCCgcgc         <  2:4759343/140‑1 (MQ=255)
                                                                                                                                 tcCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGa     <  1:1649696/140‑1 (MQ=255)
                                                                                                                                 tcCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGa     >  1:702972/1‑140 (MQ=255)
                                                                                                                                 tcCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGa     >  2:3089926/1‑140 (MQ=255)
                                                                                                                                 tcCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGa     <  2:121747/140‑1 (MQ=255)
                                                                                                                                 tcCATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGa     >  2:3216041/1‑140 (MQ=255)
                                                                                                                                  ccATTGCTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGAc    <  2:2887191/140‑1 (MQ=255)
                                                                                                                                   cATTGCTAGCGGGTTAAACGCGCTAACCTGTCTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACg   >  2:2229805/1‑140 (MQ=255)
                                                                                                                                    aTTGCTAGCGGGTTAAACGCGCTAACCTGATTTCGATTTTTTCCAACGCCTGGCTGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACACGCGCCACACgg  >  1:4374653/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                       
ATAATCACGCTTTACAATATCCAGCGCGCGCAGCACGGTACTGGCAGGGATCTGATTTTCCTCCAGCAGCACAATCAAATCGACAGCCAGTTTGACATCGTCAGGGGCATTTTCCAGTGACATATTCTCTCCATTGTTAGCGGGTTAAACGCGCTAACCTGTTTTCGATTTTTTCCAGCGCATGGCGGCAGCGTGCCAGGCGCGCTTCATAGGCTTCCACTTCACGATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGG  >  NZ_CP025268/489199‑489470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑