| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,215,634 | +C | pseudogene (402/405 nt) | tfaP → | tail fiber assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,215,634 | 1 | . | C | 99.3% | 1308.3 / 0.9 | 407 | pseudogene (402/405 nt) | tfaP | tail fiber assembly protein |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base C (231/173); total (234/173) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 428 total aligned reads displayed.
GGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAG‑TT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCA > NZ_CP025268/1215495‑1215765 | ggCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑tt < 1:2718885/140‑1 (MQ=255) gggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑ttcagg < 2:1993883/140‑5 (MQ=255) gTAAAGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGcc < 1:907685/140‑1 (MQ=255) tAAGGCTGCATTGGGACGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCa > 1:3667946/1‑140 (MQ=255) tAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCa > 1:5312302/1‑140 (MQ=255) aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAAGTTGTGGCTGGATTATCTGGAAGCACTGGAGCTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGa > 2:38956/1‑140 (MQ=18) gCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATg < 2:4575698/140‑1 (MQ=255) cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACAt > 1:5474064/1‑140 (MQ=255) cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACAt > 1:1542602/1‑140 (MQ=255) aTTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATc > 2:2464664/1‑140 (MQ=255) gggAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCgg < 1:752186/140‑1 (MQ=255) ggAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgc > 1:4293861/1‑140 (MQ=255) gAATACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 2:5082704/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg > 1:5164693/1‑140 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 2:2909629/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg > 2:3304786/1‑140 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 2:3188126/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 2:5598595/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 1:2549575/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 1:2464664/140‑1 (MQ=255) gAAAACTTAAAGCAGATGCGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 2:3801998/140‑1 (MQ=17) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGAt < 2:3462621/125‑1 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGt > 2:1451163/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGt > 2:1501274/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGt > 2:4378625/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGt > 1:4219104/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGt < 1:2314284/140‑1 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGt > 2:2952384/1‑140 (MQ=255) aagaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTAt < 2:4905405/140‑1 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCt > 1:237768/1‑140 (MQ=255) aTGAGCTGAAACAATATAATTTGGGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTg > 2:169077/1‑140 (MQ=255) cTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGcc > 2:2276404/1‑140 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 1:2834323/140‑1 (MQ=255) tataATTTGTGGCTGGCTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 1:4135351/1‑140 (MQ=255) tataATTTGTGGCTGGATTATCTGGAATCACTGGAACTGGTTGATACAACCAGTGCGCCAGATATTGAATGGCCTACGCCTCCAGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCATCACcgcg > 2:4105778/1‑140 (MQ=14) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTGTCTGTTGCCGTCACcgcg > 1:3645896/1‑140 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 1:1151775/1‑140 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 2:4301952/140‑1 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 2:844969/140‑1 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 1:3819990/140‑1 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 1:1366339/140‑1 (MQ=255) ataATGTGGGGGTTGCTTATGTGGAAGCAGTGGAACTCACTGATACATCCAGTGCGCCAGATATTGAACGGCCTACGCCTCCGGCAA‑TTCAGGCCAGATGAAATCCGGCGCGGTGCTAGTATCTGTTGCCGTCACCGCGt < 2:5210732/140‑1 (MQ=11) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:1977464/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:82056/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:475466/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCAGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:2031851/140‑1 (MQ=14) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGgcg < 1:717342/103‑1 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc > 1:5396625/1‑128 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTa > 2:1365672/1‑140 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGCTC‑AGTCCAGATGACATCCGGCGCGGTGCTGGTAGCTGTTTCCGTCAACGCGTCAATGTAAt > 2:4137588/1‑140 (MQ=11) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCTCGTCAATGTAAt > 2:1267770/1‑140 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 2:2726908/136‑1 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAAt > 2:3755499/1‑140 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAAt > 1:3398132/1‑140 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAAt > 2:2042588/1‑140 (MQ=255) gATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc > 2:2644280/1‑140 (MQ=255) aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGCCATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca < 2:3318272/140‑1 (MQ=255) aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca < 1:1586555/140‑1 (MQ=255) aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca < 1:3541807/140‑1 (MQ=255) ttctCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 1:49008/137‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATTTTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 1:3340917/140‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGTCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 1:5013871/140‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 1:4446685/140‑1 (MQ=255) tCTGGAAGCACTGGAACTGGTTGATACATCTAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGc > 2:730338/1‑140 (MQ=255) ggAAGCACTGGAATTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt < 2:4804259/140‑1 (MQ=255) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa > 1:2922191/1‑140 (MQ=255) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTCGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa > 1:4034330/1‑140 (MQ=255) aaGCACTGAAACTGGTTGATACATCCGGTGCGCCAGATAGTGAATGGCCTACGACTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGTTGGTATCTGTTGCCGTGCCCGCGTCATTGTAATCCAGaacaactgtaa > 2:2841763/1‑133 (MQ=11) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg > 1:1021246/1‑140 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg > 2:4776469/1‑140 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCGCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAACGTTAAGTCTg > 2:4246525/1‑140 (MQ=14) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTgg < 1:3066979/140‑1 (MQ=255) ttGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctg > 1:4615980/1‑140 (MQ=255) tGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgc > 1:4358674/1‑140 (MQ=255) gATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcc < 1:635541/140‑1 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 2:2601602/140‑1 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 2:4699481/140‑1 (MQ=255) ccAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCa > 1:1282921/1‑140 (MQ=255) ccAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCa > 1:169815/1‑140 (MQ=255) ccAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCa > 1:3200184/1‑140 (MQ=255) tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 1:5225288/1‑140 (MQ=255) tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 2:1766014/1‑140 (MQ=255) tGCGCCAGATATGGAATGGCCTACGCCTCCGGCAGCTC‑AGGCCAGATGACATCCGGCGCGGAGCGGGTATCTGTTACAGTCACCACGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTGTCTGCCTGCGTCAGatt > 2:5477177/1‑140 (MQ=14) ccAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGt > 1:3946013/1‑140 (MQ=255) ccAGATATTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGGATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGt > 2:2192252/1‑140 (MQ=255) atTGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGcc > 2:504553/1‑140 (MQ=255) ttGAATGGCCTACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCt < 1:2142217/140‑1 (MQ=255) ggcctACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAtt < 2:4032146/136‑1 (MQ=255) gcctACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAttt > 2:3085483/4‑140 (MQ=255) gcctACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAttt > 1:5598581/4‑140 (MQ=255) cctACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTc > 2:699010/3‑140 (MQ=255) ctACGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGGCAATGTAATCCAGCACAGCGTCAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTGCa > 2:5452118/2‑140 (MQ=18) atgtcTCCGGCAG‑TTCAGTCCAGCTTATTTCCTGCCCGTTGCTGGTATCTGTTTCCCTCACCGCGTCAATCTAATCCAGCACAGCGTTAAGTGTGGTTTTTTCTTCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGt < 2:3657183/136‑1 (MQ=255) aCGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCACTGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGt < 2:5160994/140‑1 (MQ=255) aCGCCTCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGt < 2:1637515/140‑1 (MQ=255) tCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCGGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAAt < 2:1028855/140‑1 (MQ=255) tCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAAt < 2:5337247/140‑1 (MQ=255) tCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAAt < 1:1815857/140‑1 (MQ=255) tCCGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGACGTCACCGCGTCAATGTAATCCAGCACAGCCTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGCAt < 2:4623345/140‑1 (MQ=17) cGGCAG‑TTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTAAATTTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAGTTCAGTTGAATCa > 2:1148322/1‑140 (MQ=17) | GGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAG‑TT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCA > NZ_CP025268/1215495‑1215765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |