| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,629,176 | (T)7→8 | pseudogene (141/392 nt) | ydeI ← | YdeI family stress tolerance OB fold protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,629,169 | 1 | . | T | 97.0% | 490.7 / 5.8 | 137 | pseudogene (148/392 nt) | ydeI | YdeI family stress tolerance OB fold protein |
| Reads supporting (aligned to +/- strand): ref base . (0/4); new base T (29/102); total (30/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 144 total aligned reads displayed.
GCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑T‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAATG > NZ_CP025268/1629034‑1629302 | gcggCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCGTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGTCATCGTGGAGGGTTTTTGCGAAATCAACGGTCA‑t‑ttt > 2:411110/4‑140 (MQ=255)gCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑t‑ttt > 1:380789/1‑140 (MQ=255)gCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑t‑ttt > 1:5459931/1‑140 (MQ=255)gCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑t‑ttt > 2:2611189/1‑140 (MQ=255)gCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑t‑ttt > 1:4321158/1‑140 (MQ=255) gCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑t‑ttt‑tt‑t < 2:296874/140‑1 (MQ=255) ggAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑t‑ttt‑tt‑ttgc < 1:4760172/140‑4 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGAATGGTGTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGcatcat < 2:1750994/140‑1 (MQ=255) cGAGATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCg > 1:3560903/1‑140 (MQ=255) aCATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGt < 1:2652129/140‑1 (MQ=255) aTTAATTTCCCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTc < 2:3856402/140‑1 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTc > 2:4062417/1‑140 (MQ=255) ttAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTcc > 2:4513961/1‑140 (MQ=255) tAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCcg < 1:4342407/140‑1 (MQ=255) aTTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCcgcg > 2:2248102/1‑140 (MQ=255) ttCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGAt < 1:5179350/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAg < 1:169482/140‑1 (MQ=255) ccGCTCTTGTCGCGAAAAGCGTAACGGTCCGCTCCTTTGGGCGGAATCAAATTACCGCGTAGTGAACCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑T‑TTT‑TTGTGCATCATCGGTTCCGCGATAGcc < 2:1040768/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc < 2:1293129/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc < 1:4955274/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc < 1:945279/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc < 1:1065162/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc < 2:628610/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc < 1:3291060/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc > 2:4955274/1‑140 (MQ=255) ccGCTCTTACCGCGAAAACCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCCTCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGcc < 2:4897027/140‑1 (MQ=255) cGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCa < 2:4164024/140‑1 (MQ=255) gCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCAt < 1:2281799/140‑1 (MQ=255) ctctTATCGCGCAAAACGTAACGGTCCGCGCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCCCCATCGGGCCTGGTTGTTGCGAAATCAACGGTCACT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCAtc < 1:4502326/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCAtc > 2:3822106/1‑140 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCAtc > 1:2052657/1‑140 (MQ=255) ctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCAtctt < 1:3812811/140‑1 (MQ=255) tATCGCGAAAACCGTAACGGTCCACTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAATCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCAtcttct < 1:5069256/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTa < 2:2728286/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTa > 1:1879803/1‑140 (MQ=255) gaacaccGTAACGGTCCTCTCCTTTGTGCGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 2:5066862/134‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:3842391/140‑1 (MQ=255) gAAAAACGTAACGGACCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 2:4593867/140‑1 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt > 1:3132821/1‑140 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt < 1:4792573/140‑1 (MQ=255) aaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGa > 1:1124110/1‑140 (MQ=255) tAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggcgg < 1:2268472/140‑1 (MQ=255) tAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggcgg < 1:3922229/140‑1 (MQ=255) cGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 1:4129718/140‑1 (MQ=255) tCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCTATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCAATAGCCATCTTCTATTGCATGAGGCGGCGGTgg > 2:2701563/1‑140 (MQ=255) ctctCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGgcg > 2:4288220/1‑140 (MQ=255) ctctCCTTTGTGAGAAATAAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGgcg > 2:4885596/1‑140 (MQ=255) ttGTGAGAAATCAAATTTCCGCGTCGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:3277621/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:181820/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:4511145/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:862258/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:1443089/140‑1 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGTTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCAGCTTCTATTGCATGATGCGGCGGTGGCGCTGTATcc > 2:4328430/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 1:5574737/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc < 1:3721184/140‑1 (MQ=255) aTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaa < 2:4616824/140‑1 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 1:4609522/140‑1 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 1:426009/140‑1 (MQ=255) cAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAc < 2:3501333/140‑1 (MQ=255) aTTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGc < 2:336072/140‑1 (MQ=255) ttcgcgcgTAGTGAAACCGACGCGCCACCGTGCATGGTTTTTGCGAAATCAACGGTCA‑T‑TTTGTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGcc < 2:3837562/136‑1 (MQ=255) ttACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGcc < 1:2980502/140‑1 (MQ=255) aCCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCt < 2:2478185/140‑1 (MQ=255) aCCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCt > 1:4705115/1‑140 (MQ=255) gcgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGt > 2:2159517/1‑140 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTc > 1:4114273/1‑140 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:4045458/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:1852053/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 1:5219127/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 1:4014726/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGGTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 2:310914/140‑1 (MQ=255) aCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCaa < 2:3467418/140‑1 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 1:2611189/140‑1 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCAAAATCAACGGTCATT‑TTT‑TT‑TGCATCCTCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATACTCTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 2:3593245/140‑1 (MQ=255) gcgcCATCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCGTCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATa > 2:4376896/1‑140 (MQ=255) tCGTTCATGGTTTTTGCGAAATCAACGGTTATT‑TTT‑TT‑TGCATCATCGGTTTCGCTATAGCCATCTTCTATTGCATGAGGCTGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:1923143/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:508013/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGGTCA‑TGTTT‑TT‑TGCAGCATCGGTTCCGCGATAGCCATCCTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGGCATCTCCCAACGCATAAGGCAt < 2:4962726/140‑1 (MQ=255) cGTGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATg < 1:1420178/140‑1 (MQ=255) tGCATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGAc > 1:2421654/1‑140 (MQ=255) cATGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACaa > 1:1077103/1‑140 (MQ=255) tGGTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGa < 1:1551576/140‑1 (MQ=255) ggTTTTTGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaa < 2:3056612/140‑1 (MQ=255) tttttGCGATATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:2638592/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:4321158/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:5495639/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:1556589/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:4694591/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:4513961/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:2052657/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:2737668/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATACTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:3163928/140‑1 (MQ=255) ttGCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCCTCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACtt < 2:295075/140‑1 (MQ=255) gCGAAATCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGc < 1:3074346/140‑1 (MQ=255) gCGAAAGCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGc < 1:2000401/140‑1 (MQ=255) ccgcaaTCAACGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGc < 2:4894973/136‑1 (MQ=255) aaCGGTCATT‑TTT‑TT‑TGCATCATTGGTTCCGCGATACCCATCTTCTATTGCATGAGGCTGCGGTGGCGCTGCATCCTGTTTTAATCCGCACTGGTCATCTGACAACGCATAAGTCATGACAAGAAAACTTGCTCATATaa < 2:4679477/140‑1 (MQ=255) aaCGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACaa < 1:3418146/140‑1 (MQ=255) aaCGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGAATGACAAGAAAACTTGCTAATACaa < 2:1109621/140‑1 (MQ=255) cGGTCATT‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAATg < 1:4636592/140‑1 (MQ=255) | GCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑T‑TTT‑TT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAATG > NZ_CP025268/1629034‑1629302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |