| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,769,852 | +C | intergenic (‑52/‑89) | yfjM ← / → rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,769,848 | 1 | . | C | 97.5% | 902.5 / 14.4 | 285 | intergenic (‑48/‑93) | yfjM/rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Reads supporting (aligned to +/- strand): ref base . (5/2); new base C (110/165); total (115/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 294 total aligned reads displayed.
TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑C‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCAAA > NZ_CP025268/2769710‑2769984 | tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCCTTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑c‑ccc < 2:2499334/140‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGATTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCGCCCCGGTAGACGATCCTGCCCTATAGTTGGAGGG‑c‑ccc > 2:2068601/1‑140 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCa < 2:2628834/140‑1 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTgg < 2:1105415/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAg < 2:3874238/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAg < 2:3361282/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAg < 1:537776/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAg < 1:5506403/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGAATGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAg < 1:4437349/140‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCa < 2:1521640/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAAt > 1:1358130/1‑140 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAAt < 2:2802970/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAAt < 1:3838756/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAAt < 1:3809232/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGATATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:5096957/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCTCCATTTTGTGGACTGCCCCCCCGGTCGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:671433/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1661513/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:5294743/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 2:5434095/140‑1 (MQ=255) ctgctgGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCACCCGGTGGGCGAGCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGATAAATTTAGCAAATCAATacac > 2:2212303/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGCCATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGGTGGAGTGCC‑CCCTATTCCTGTGGCTAAATTTAGCAAATCACTccac > 1:5530895/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:3684053/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATacac > 1:3949303/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:5302138/1‑140 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACtt > 2:5036561/1‑140 (MQ=255) tGGTGAGATCAGGAAAATTTCACCGACACGATGTACCTCATCCTCCTTTTTGTAATCTGCACCCCCGGTAGACGATCCTGCCTTATAGTTGGAGTGAC‑CCCTATTCAGTTGGTTAAATTTAGCAAATCAATACACTTctg < 2:2771910/140‑3 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGATTGCCCCCCCGGTATACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGCCTAAATTTAGCAAATCAATACACTTCAgg > 2:102724/1‑140 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 1:797553/1‑140 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 1:2061722/140‑1 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 1:2161966/140‑1 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 2:1645841/140‑1 (MQ=255) tGAGATCAGGAAGAGGTGACCGAAACGATGGACGTCATCCCCCAGTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 2:1152233/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:2420648/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:5166564/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:5342020/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:3450293/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCACCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:5153984/140‑1 (MQ=255) aTCAGGAAGAGGTTACCAAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGCGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:4704416/140‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtat < 1:1244967/140‑1 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTTTTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:2228489/140‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTa < 1:1959424/140‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTa < 1:1756215/140‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga > 2:912705/1‑140 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga > 1:3098942/1‑140 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCCATACACTTCAGGGGGGTATTATTGTagag < 1:445438/140‑1 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg < 1:3998831/122‑1 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTagag < 2:4449415/140‑1 (MQ=255) ttACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGt < 1:2598097/140‑1 (MQ=255) ttACCGAAACGATAGACATCATCCCCCATTTTGTCCACTCCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGt < 2:2370767/140‑1 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCaa < 2:4856385/110‑1 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCaa > 1:4856385/1‑110 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcc < 1:227968/140‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcc < 2:1682630/140‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcc < 1:3674443/140‑1 (MQ=255) aaaCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTCGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcccc < 2:425387/140‑1 (MQ=255) aCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTAAAGTTGGAGTGCC‑CCCTATGCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGTGGTATTATTGTAGAGTTTCCCCat > 1:980645/1‑140 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCatat > 2:4065097/1‑140 (MQ=255) tcatcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTAt < 2:3956623/140‑1 (MQ=255) tcatcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTACCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTAt < 2:3283772/140‑1 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg < 1:708767/140‑1 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg < 2:212617/140‑1 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg < 2:3444709/140‑1 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg > 2:1245688/1‑140 (MQ=255) cccATTTTGTGGACTGCCCCCCCGGTAGACGATGCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATGGTAGAGTTTCCCCATATGTTTCTATGGGATc > 1:3071106/1‑140 (MQ=255) cccATTTTGTGGACTGCCCCACCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑CACCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATc < 2:2936812/140‑1 (MQ=255) aTTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATTTGTTTCTATGGGATCCAg > 2:3990397/1‑140 (MQ=255) tgtgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGaaa < 1:2760602/140‑1 (MQ=255) tgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATg > 2:3063044/1‑140 (MQ=255) tGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACaag > 2:5591162/1‑139 (MQ=255) tGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAAt > 2:2048/1‑140 (MQ=255) gCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATc > 2:1924360/1‑140 (MQ=255) ccccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATc > 1:4801616/2‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 1:2087144/1‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGATTCCCCATATGTTTCTATGGCATCCAGGAAATGACAATCa > 2:3782617/1‑140 (MQ=255) ccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGa > 1:2119794/1‑140 (MQ=255) gTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTAc > 1:1505790/1‑140 (MQ=255) gTAGACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTAc > 1:3327839/1‑140 (MQ=255) gACGATCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaaa < 2:2315518/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta > 2:4273611/1‑73 (MQ=255) aTCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:4273611/73‑1 (MQ=255) aTCCTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:2299065/140‑1 (MQ=255) cTGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTaa > 1:4901229/1‑140 (MQ=255) tGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTaaa > 2:3224535/1‑140 (MQ=255) tGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTaaa > 1:4921267/1‑140 (MQ=255) tGCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTaaa > 1:1164595/1‑140 (MQ=255) gCCCTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAAt < 1:1700247/140‑1 (MQ=255) cccTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATc > 1:3169254/1‑140 (MQ=255) cccTATAGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATc > 1:1054364/1‑140 (MQ=255) ccgataGTTGGAGGGCC‑CCCTATGCAGGTTGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCACATATGGTTCTATAGGATCAAGGAAATGAGAAGCAGACGTTACGAAAATGTAAAttt > 2:3171475/4‑138 (MQ=255) ataGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGt < 1:1124754/140‑1 (MQ=255) taGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTAc < 1:928020/122‑1 (MQ=255) taGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 1:3268220/1‑140 (MQ=255) taGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 2:3586423/1‑140 (MQ=255) taGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 2:2622123/140‑1 (MQ=255) taGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:587829/140‑1 (MQ=255) taGTTGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATCACAATCAGGATTTACAAAAACTTAAATCAGGTc > 2:3333712/1‑140 (MQ=255) tGGAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAggg < 1:2262692/140‑1 (MQ=255) ggAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 1:2878111/1‑140 (MQ=255) ggAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 1:4747497/1‑140 (MQ=255) gAGTGCC‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCa < 2:801465/140‑1 (MQ=255) | TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTG‑C‑CCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCAAA > NZ_CP025268/2769710‑2769984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |