| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,858,752 | +T | pseudogene (395/2078 nt) | flhA → | formate hydrogenlyase transcriptional activator FlhA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,858,748 | 1 | . | T | 97.1% | 1037.0 / 16.9 | 282 | pseudogene (391/2078 nt) | flhA | formate hydrogenlyase transcriptional activator FlhA |
| Reads supporting (aligned to +/- strand): ref base . (4/4); new base T (134/138); total (140/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 329 total aligned reads displayed.
GCAGCATTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑TTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGT > NZ_CP025268/2858611‑2858880 | agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑t > 1:3235967/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑t > 2:1615318/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑t > 2:1911413/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑t > 2:4124192/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑t > 2:399012/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCCGAAGGGCATA‑ttt‑t > 1:2267488/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGGTACGAAGAATTTTGTGAAAGCTGGCCGCAGCTGGACGCAGGCGGGCTATACCCAAAATTGGGTCACTATTGCCTGATCGCACCGGCGGCGGCAGGGCATA‑ttgt > 2:693975/1‑138 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATGGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑t > 1:3798409/1‑140 (MQ=255) caTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑ttg < 2:522540/140‑3 (MQ=255) aTTTTGTCGCGCCCTGCTACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCTCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCATTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑ttgg < 1:3110407/140‑4 (MQ=255) aTTTTGTCGCGCACTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCGATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑ttt‑ttgg < 2:3948453/140‑4 (MQ=255) ttGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑tggtgg < 1:5451019/140‑1 (MQ=255) tGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGc > 1:352217/1‑140 (MQ=255) gTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCt < 1:5503525/140‑1 (MQ=255) gTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCt < 1:2605812/140‑1 (MQ=255) cTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAAttt < 1:4660947/140‑1 (MQ=255) tGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTa < 2:1720078/140‑1 (MQ=255) gATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTAt < 2:3385385/140‑1 (MQ=255) gATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTAt < 1:4378039/140‑1 (MQ=255) gATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTAt < 1:849772/140‑1 (MQ=255) cTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTa < 1:5217692/140‑1 (MQ=255) tccATTGCAGTTACGAAGAATTTTGCGAAACCTAGCCGATGCTGGCCGCAGGTGGTCTATCCCCAAAACTTGGTCACTATTGCCGGATGCCACTGGCGGCGGAAGGGCATATTTT‑TCGTGACTGCGAATGTATTCGTTAt > 2:790644/3‑140 (MQ=255) tGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTAt > 2:4499043/1‑140 (MQ=255) tGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTAt > 1:4013773/1‑140 (MQ=255) tGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTAt > 1:1437896/1‑140 (MQ=255) cATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGa > 1:360081/1‑140 (MQ=255) ttGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACg > 1:4233635/1‑140 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGAt < 1:3711459/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGAt < 2:2797865/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGAt < 2:2476775/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGAt < 2:1323521/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGAt < 1:3580054/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGAt < 1:3273723/140‑1 (MQ=255) gTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGc > 2:4329291/1‑140 (MQ=255) ttACGAAGAATTTTGTGAAACCTGGCCTCAGGTGGACGCAGTTGGGCTATACCCAATATTTGGTCACTATTGCGTGATGCCACTGGCGGCGGACGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGATATGACGTTCGcc > 2:4686089/1‑140 (MQ=255) aCGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGcccc > 1:754568/1‑140 (MQ=255) aCGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGcccc > 1:4491425/1‑140 (MQ=255) aCGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGcccc > 1:2097187/1‑140 (MQ=255) aCGAAGAATTTTGTGAAACCTGGCCGCAGCGGGACGAAGGTGGGCGAGACTCAAAATGTTGGAACTGTTGCCTGAAGCGACGGGCGGCGGAAGGGCCTAGTTT‑TGGTGGGTGTGGATTTATTGGTTATGATGATAGcccc > 2:2214945/1‑140 (MQ=255) gaagaaTTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTg < 2:5553888/140‑1 (MQ=255) agaaTTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGa < 2:1998091/140‑1 (MQ=255) aTTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCg < 2:1485117/140‑1 (MQ=255) ttttGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGa > 1:1012836/1‑140 (MQ=255) ttGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGaaa < 2:4280891/140‑1 (MQ=255) gtgAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGaaaaa < 1:1460828/140‑1 (MQ=255) gtgAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGaaaaa < 1:2314417/140‑1 (MQ=255) aaCCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGt > 1:3224364/1‑140 (MQ=255) aaCCTGGCCGCAGCTGAACGCAGGTGGGCTATACCCAAAAGTTGGTAGCTATTGCCCGAAGCTAAAAACGCCGGAAGGACAGATTTT‑TGGTGACTGTGAATTGATTTGTTACAAAGAACGACCCAGCACCGAAAAagagg > 2:310274/1‑139 (MQ=255) ggCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAAt < 1:4965839/140‑1 (MQ=255) aGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTg > 1:5075250/1‑140 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 1:3045150/140‑1 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 1:3149880/140‑1 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 1:4598919/140‑1 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 1:2502307/140‑1 (MQ=255) gCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACAtt < 1:2206294/140‑1 (MQ=255) aGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGGGAATTTATTCGTTATGACGATCGCCCCTGGTGCGAAAAGGAGTTCAATCGTCTGCAAACATTTa > 2:4364173/1‑140 (MQ=255) gTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACg > 2:3909990/1‑140 (MQ=255) gggCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCa < 1:4329291/140‑1 (MQ=255) cTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGAt > 1:1353648/1‑140 (MQ=255) taCCCAAAATTTGGTCACTATTGGCTGATGACACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTGTTCGTTATGACGATCGCGCCGGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGt > 1:3343081/1‑140 (MQ=255) taCCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGt > 2:5437556/1‑140 (MQ=255) taCCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGt > 1:1039128/1‑140 (MQ=255) taCCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGt > 1:1991152/1‑140 (MQ=255) taCACAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGt > 2:2869907/1‑140 (MQ=255) cgcAAAATTTGGTCACTATAACCTGATGCCACTGGCGGAGGAAGAGCACA‑TTTCTGGTGGCTGTGAATGTATGCGTTCTGCCGATCGACCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATGTACGCAGGTCGttt < 2:183541/138‑1 (MQ=255) aaaaTTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGTCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCtt > 2:125419/1‑139 (MQ=255) aaaaTTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTg > 2:2063392/1‑140 (MQ=255) aaaTTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTgtgt > 2:3169017/1‑140 (MQ=255) aaaTTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTgt < 2:4013773/140‑1 (MQ=255) ttGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTgtcgtc > 1:1262756/1‑140 (MQ=255) gTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCTTCAcc > 1:3413027/1‑140 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 1:4131958/140‑1 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 2:499422/140‑1 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 2:4891824/140‑1 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 1:5022844/140‑1 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATGCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 1:732090/140‑1 (MQ=255) cTGATGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCACTCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCa < 2:1133442/140‑1 (MQ=255) aTGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCagag < 2:5108747/140‑1 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACTAATCCAGAGc > 2:3621334/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 2:899385/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 2:5487233/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 1:1836921/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 1:91485/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 2:2687526/1‑140 (MQ=255) ccACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcg > 1:5176278/1‑140 (MQ=255) ccACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcg > 1:1614327/1‑140 (MQ=255) ccACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcg > 1:4716765/1‑140 (MQ=255) ccACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcg < 2:3784663/140‑1 (MQ=255) cACTGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcgc < 2:4250908/140‑1 (MQ=255) tGGCGGCGGAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 1:2425503/88‑1 (MQ=255) ggcggAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTa < 1:3909990/140‑1 (MQ=255) ggcggAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTa > 1:1549374/1‑140 (MQ=255) gcggAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTaa > 1:590252/1‑140 (MQ=255) cggAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAAc < 2:2416778/140‑1 (MQ=255) ggAAGGGCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACa > 1:2816715/1‑140 (MQ=255) gggCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGt < 2:2822583/140‑1 (MQ=255) gggCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGt < 1:1671503/140‑1 (MQ=255) gggCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGt < 1:4348849/140‑1 (MQ=255) gggCATATTTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGt < 2:3287820/140‑1 (MQ=255) gcgCATATTTT‑TGGTGGCTGTCAATTTATTCGTTATGACGATCACCCCTGGAGGGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGt < 1:2936237/138‑1 (MQ=255) | GCAGCATTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑TTT‑TGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGT > NZ_CP025268/2858611‑2858880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |