| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,016,563 | +C | intergenic (‑19/+28) | yqeB ← / ← yqeC | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB/selenium cofactor biosynthesis protein YqeC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,016,562 | 1 | . | C | 98.7% | 1019.8 / 4.8 | 310 | intergenic (‑18/+29) | yqeB/yqeC | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB/selenium cofactor biosynthesis protein YqeC |
| Reads supporting (aligned to +/- strand): ref base . (4/0); new base C (126/178); total (131/179) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.09e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 330 total aligned reads displayed.
TCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATAT‑C‑TTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCA > NZ_CP025268/3016423‑3016696 | tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGatat > 2:2906523/1‑140 (MQ=255)tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGatat > 1:3804829/1‑140 (MQ=255)tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGatat > 1:3492871/1‑140 (MQ=255)tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAAAATTCATACCAACCTCAATGGatat > 2:2517301/1‑140 (MQ=255) gcgcgcACTAACATTTGTGCAGAATGGCGGGGAGGCGAGCCTCGGCTATCAACAAGTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATAT‑cct < 2:3447374/140‑3 (MQ=255) tAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTaa < 1:1884293/140‑1 (MQ=255) tAACATTTGTGCAGAATGGCGGGGACTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTaa < 1:710799/140‑1 (MQ=255) tttGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCgg < 2:5389241/140‑1 (MQ=255) tgtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGaa > 2:4854640/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAAt > 2:4212392/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAAt > 2:1439423/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAAt > 1:2083724/1‑140 (MQ=255) aaTGGCGGGGAGTCGAGCCTCGGCTCTCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCgg > 2:2772380/1‑140 (MQ=255) aaTGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCgg > 1:5397852/1‑140 (MQ=255) tGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGc > 1:3073924/1‑140 (MQ=255) ccgggAGTCGAGCCTCGGCGATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCCCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCgc < 2:804563/138‑2 (MQ=255) cGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCgc > 2:2155926/1‑139 (MQ=255) cGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCgc > 1:2922337/1‑139 (MQ=255) ggggGTCGAGCCTCGGATATCAACAATGTGCGCCACAGCAAACGGACAATTTTGCTCTGCGAGTTTTGCAGCCTCTGTGAAGATATTCATACCATCCGCAATGGATATCC‑GTTCAGTAACCCGGAATACACGGGCCGCTa < 2:5436473/140‑1 (MQ=255) gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCgcta < 1:3409603/140‑4 (MQ=255) gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTa < 1:2138695/140‑1 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACACTTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCGTACGAACCTCAATGGATAT‑CATTTCAGTAACCCGGGATACCAGGGCCGCTAAtt > 2:3927257/1‑140 (MQ=255) cGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTg > 1:984780/1‑140 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg < 1:2631227/140‑1 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg < 2:2345758/140‑1 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg > 2:3018445/1‑140 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg < 1:3156890/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 1:5590762/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 2:2930771/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 2:527282/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 1:1544492/140‑1 (MQ=255) tCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGcgcgcg > 1:3197576/1‑140 (MQ=255) caaTTTGCGCCATAGCAAACGGACAATTTTGATCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTg < 1:2525174/140‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 1:4212392/140‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 1:1593860/140‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 1:4441945/140‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTACGCGCGATTGCa < 2:5525837/140‑1 (MQ=255) tttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg > 1:1201630/1‑140 (MQ=255) tttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg > 1:5177722/1‑140 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:706778/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 1:82121/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 1:2059423/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:1709378/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 1:1726945/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 1:4666758/140‑1 (MQ=255) gcgcCATAGCAAACGGACAATTTGGCTCGTCGAGTTTTGCAGCCTCTCTGAAAAGATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCTGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAt > 2:3102868/1‑140 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:1907186/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:1089602/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:2572955/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:2712596/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:2725502/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:4900382/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:4983316/140‑1 (MQ=255) aTAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCt < 1:1737278/140‑1 (MQ=255) tAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCtt < 1:5305433/140‑1 (MQ=255) cAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGGAGGATGTTCTTGta > 2:203919/1‑140 (MQ=255) aaaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtat < 1:4364044/140‑1 (MQ=255) aaaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtat < 2:1304627/140‑1 (MQ=255) accaTTCTGCTCTTCGAGACTTGCAGCCTCTGTGAAAATATTCATACCAACATCAATGGATATCC‑CTTCAGTAACCCGGACTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc < 2:4528290/137‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc < 2:3168400/140‑1 (MQ=255) gCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGa < 1:5376206/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:4998077/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:4598759/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:5480756/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:5541282/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:3739973/140‑1 (MQ=255) ctctTACAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCACTAACCCGGAATAACCGGGCCGCTAATTCACAACTCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:2772759/140‑1 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct > 1:850302/1‑140 (MQ=255) tttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcg < 1:3909262/140‑1 (MQ=255) ttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgt < 2:1177288/140‑1 (MQ=255) ttGCAGCCTCCGTGAAAATATTCATACCACCCTCAACGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTCCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgt < 2:1649377/140‑1 (MQ=255) gCAGCGTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGTCTATAcgtcg > 2:183197/1‑140 (MQ=255) gCAGCCTCTGTGAAACTATTCATACCAACCTCAATGGATATCC‑TTTCAGTACCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcg < 2:2233627/140‑1 (MQ=255) gCAGCCTCTGTGAAAATATTCATACCAGCCTCAATGGATATCC‑TTTCAGTAACCCGGAATCCCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcg < 2:4749903/140‑1 (MQ=255) gCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcg < 1:4792402/140‑1 (MQ=255) gCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcg > 2:3964820/1‑140 (MQ=255) gCCTCTGTGAAAATATTCATACCAACCTTAATGGATATCC‑TTGCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCgtgt < 2:4412830/140‑1 (MQ=255) gtgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGc < 1:1645370/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTACCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 1:669081/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 1:2331402/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 2:4455250/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 1:2883648/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 1:4683082/140‑1 (MQ=255) tatTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGtt > 1:1143365/1‑140 (MQ=255) ttCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGGTGTTGCAGCGGTTGa > 1:4732058/1‑140 (MQ=255) tCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGaa < 2:4041521/140‑1 (MQ=255) cATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAg > 2:4374317/1‑140 (MQ=255) tACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGa > 1:4035578/1‑140 (MQ=255) ccAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGc < 2:5177722/140‑1 (MQ=255) cccTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg < 2:3775288/139‑1 (MQ=255) aCCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCGAGACTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 2:3357218/1‑140 (MQ=255) aCCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 1:1314472/1‑140 (MQ=255) aCCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 1:198423/1‑140 (MQ=255) ccTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 1:2208779/1‑140 (MQ=255) ccTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 2:2391527/1‑140 (MQ=255) cTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCt < 2:1023258/140‑1 (MQ=255) aaTGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtg < 1:796308/140‑1 (MQ=255) aTGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtgt > 1:2743231/1‑140 (MQ=255) tGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtgtg > 2:1565783/1‑140 (MQ=255) gATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCa < 1:3342153/140‑1 (MQ=255) | TCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATAT‑C‑TTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCA > NZ_CP025268/3016423‑3016696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |