| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,239,247 | (T)6→7 | intergenic (+264/‑18) | ygjR → / → alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,239,241 | 1 | . | T | 94.8% | 1159.1 / 46.5 | 324 | intergenic (+258/‑24) | ygjR/alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Reads supporting (aligned to +/- strand): ref base . (8/9); new base T (104/203); total (112/212) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 377 total aligned reads displayed.
TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑T‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 | tgtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑g > 2:2375271/1‑140 (MQ=255) gtgggAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t > 2:2686397/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCGGACGTTGGCC‑G‑t‑t > 2:4853208/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑t > 1:4852992/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑t > 1:1432116/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑t > 1:3842978/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑t > 1:4389913/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGGCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑t > 2:3099534/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTGTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑t > 1:5326870/1‑140 (MQ=255) tgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑tt‑t > 1:316712/1‑140 (MQ=255) tgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑tt‑t > 2:2008770/1‑140 (MQ=255) gAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑tt‑t‑t < 1:3520391/140‑1 (MQ=255) aaaaaCACATCCGGTCGCCGGGCAACCCGAAAGGAATACGCAGACGTATGCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCGGACGTTGGCC‑G‑t‑tt‑t‑ttt < 2:5261403/140‑2 (MQ=255) aaccacaTCCGGTCACCGGGCAACCCGAAAGCAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑T‑TTGT‑TT‑At < 2:648133/137‑1 (MQ=255) aaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑tt‑t‑tttat < 1:1949123/140‑4 (MQ=255) aaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑t‑tt‑t‑tttat < 1:3864842/140‑4 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑Atgtg > 2:5589636/1‑140 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTa < 2:1601844/140‑1 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTa < 1:596433/140‑1 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTa < 1:1020479/140‑1 (MQ=255) ccGGTCACCGGGCCACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTTTATGCATAAAAAGCAGCGGCTGACGTCTGCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTATgg < 2:1084420/140‑1 (MQ=255) ccGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAgg < 1:1667929/140‑1 (MQ=255) ccGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAgg < 1:2468252/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGaa < 1:5092726/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACt < 1:1964673/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACt < 1:695025/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACt < 1:5372610/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTCTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACt < 1:2094577/140‑1 (MQ=255) cGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTa > 1:3901663/1‑140 (MQ=255) gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAGGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGa > 2:5103331/1‑140 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATa > 2:395063/1‑140 (MQ=255) aaGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCg < 2:915641/140‑1 (MQ=255) aaGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCg > 2:3708476/1‑140 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACg > 2:696780/1‑140 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc < 2:4371109/140‑1 (MQ=255) cGCAGACGTATTCCTTTTTTGTTGTGAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 2:5059867/140‑1 (MQ=255) cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 1:125463/140‑1 (MQ=255) cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 2:2516323/140‑1 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAATGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 2:1780029/1‑140 (MQ=255) cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCtt > 1:4459314/1‑139 (MQ=255) tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg > 1:160936/1‑140 (MQ=255) tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg < 2:1222094/140‑1 (MQ=255) ccTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc < 1:2658219/140‑1 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 1:3970611/1‑140 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 1:1878544/140‑1 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 2:157809/140‑1 (MQ=255) ttgttgTAAGTGCGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGCCGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc < 2:2229297/140‑1 (MQ=255) tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACt > 1:1579165/1‑97 (MQ=255) tgtAAGTGAGACCCTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg < 2:351662/140‑1 (MQ=255) gtAAGTGAGCCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgt > 2:877262/1‑140 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:4159843/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:3581033/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:4544063/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGACGTCTATGCATAAAAAGCAGCGGCTGACGACTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:3010122/140‑1 (MQ=255) agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTc > 1:2706274/1‑140 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:1749790/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:2923146/1‑140 (MQ=255) ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGc < 1:4019455/140‑1 (MQ=255) ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGc < 1:948173/140‑1 (MQ=255) aaGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑CTGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTg > 1:1634987/1‑140 (MQ=255) ggCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGc < 1:1641035/140‑1 (MQ=255) gggtATGGAGAAAAAGCAGCGGCTGACGTCTTCCGAGGTTGGCCGG‑T‑TT‑T‑TT‑AGGTGGAAGGAACTTCTAGGAATACTGTCGGCACGCCGGTGCTAGGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa < 2:1423911/137‑1 (MQ=255) gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa < 1:4907978/140‑1 (MQ=255) gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa < 1:1168600/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 1:2751473/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 1:4578174/140‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑T‑TT‑T‑TTCATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 2:4484239/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 2:2101226/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt > 1:3022622/1‑140 (MQ=255) gCATAAAAAGCAGCGGCTGACGTCTTCCGACGTGGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGACCTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgtt < 1:4976655/140‑1 (MQ=255) aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGttgttg > 2:2777265/1‑140 (MQ=255) aaaaGCAGCGGCTGACGACTTCTGACGTTGGCC‑G‑T‑TTAT‑TT‑ATGTGTAAGGAACTTCTATGAAACCTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCCGTTGTTGc > 2:5441127/1‑140 (MQ=255) agcagcGGCTGACGTCTTCCGACGTTGGCC‑G‑T‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 2:3889577/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 1:2361522/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTGGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 2:1361163/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 2:2946482/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 2:2715052/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTCGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGACCTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 1:4328510/140‑1 (MQ=255) agcGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGc > 1:1040966/1‑140 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 1:887855/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 1:322498/140‑1 (MQ=255) cTGACGTCTTCCGACGTTGGCC‑G‑TCTT‑T‑TT‑ATCTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGCCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcgtcgt < 2:184273/140‑1 (MQ=255) tGACGTCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATTGACCTGTTGTTGCAGGGGCGTCGTg < 2:5014047/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACTCAGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:4645256/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:709756/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:4652437/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:3743076/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:3382016/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCCCCCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:5371517/140‑1 (MQ=255) tCTTCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTAGGAAAACAGTCGGCACGCCGTTGCTCTGGGGCGGATTCGCTGTTGTGGTCGCCATTATGCTGGCTATTGACGTGATGTTGCAGGGGCGTCGTGGGGca < 1:3353067/140‑1 (MQ=255) ttCCGACGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGcaca > 1:1436878/1‑140 (MQ=255) aCGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGcca > 1:1712791/1‑140 (MQ=255) aCGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGcca > 1:2582483/1‑140 (MQ=255) cGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 1:3892227/140‑1 (MQ=255) cGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:3200201/140‑1 (MQ=255) cGTTGGCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:4069372/140‑1 (MQ=255) ggCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGcg > 1:4787493/1‑127 (MQ=255) ggCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:4787493/128‑1 (MQ=255) ggCC‑GTT‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc > 1:5483392/1‑140 (MQ=255) cgCC‑G‑T‑TT‑TGTT‑ATGTGTAAGGAACTTCTATGAATACGGTCGGCACGCCGTTGCTATGGGGCGGATTTGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 1:4943190/139‑1 (MQ=255) | TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCC‑G‑T‑TT‑T‑TT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |