| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,509,139 | +C | pseudogene (137/878 nt) | php ← | phosphotriesterase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,509,136 | 1 | . | C | 97.6% | 1324.4 / 22.9 | 414 | pseudogene (140/878 nt) | php | phosphotriesterase‑related protein |
| Reads supporting (aligned to +/- strand): ref base . (7/3); new base C (216/186); total (225/189) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 467 total aligned reads displayed.
CACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑G‑CC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508998‑3509270 | cacaTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTacgca‑c‑g‑c > 1:2000530/1‑140 (MQ=255) caTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑G‑cc‑c > 1:482420/1‑140 (MQ=255) caTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑G‑cc‑c < 2:5088923/140‑1 (MQ=255) tGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑G‑cc‑ccg < 1:1015228/140‑3 (MQ=255) tGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑G‑cc‑ccg < 2:2330754/140‑3 (MQ=255) gggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGtcat < 1:2881774/140‑1 (MQ=255) ggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGtcatc < 1:5507851/140‑1 (MQ=255) aaaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAgg < 2:2965804/140‑1 (MQ=255) aaaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAgg < 2:377845/140‑1 (MQ=255) aaaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAgg < 2:4683576/140‑1 (MQ=255) tCCTGGTAATATGCTGTACAGTCCACCACGTTGATCTCGGTCTCGCGCATTAAATTAAGCATAAAATGTGCATTGCGTCCCATCTAACGGTTGGTCATCTCAATCATTTTATTAA‑C‑GCCC‑CGGGTAATCAGGTCGTTCAt > 2:1785935/1‑140 (MQ=255) tCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGTCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCAt > 2:1425791/1‑140 (MQ=255) aataaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTgg < 1:2149108/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:4976080/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:284518/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:363679/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:742636/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCACGTCTCGAGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:674992/140‑1 (MQ=255) aCCGGTACACGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:3613515/140‑1 (MQ=255) ggTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGa > 1:2517533/1‑140 (MQ=255) gTACAGGCCACCCCGTGGATCCCCGTCTCGCGCATTACATGAACCCCAAACCGCGCATTGAGCCCCACGTACCGGCTGGTCAGCGCGATCAAATGACCCACC‑C‑CC‑CGAGTCATAAGGGCGGTCACCACCAGGCaactcac > 2:4856805/1‑135 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCCAATGaa > 1:5027328/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 2:4287803/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 1:357512/1‑140 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:3926445/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc > 1:2466408/1‑140 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:2126992/140‑1 (MQ=255) gaCAGGCCACCACGTTGATCCCCGTCTCGTGCATTACATCAAGTATAATTTGCGCATTGTGCCCCATGTAACTGTTGGTCATCTCGCTCACTTTTCGGA‑T‑GTCC‑CGTGTCATTACGTCGTTCCTTTCCTTGCAATTGagc > 2:1857806/2‑138 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 2:5194265/1‑140 (MQ=255) caccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACt > 1:2602821/1‑140 (MQ=255) cacGTTGCTCCCCGTCTCGCGCATTCCATCAAGCATAACTTGCGCATTTCGCCCCATGTAACTGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt < 2:1308749/140‑1 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTGCTGGCAAATGAACGCATACTGAt > 2:3420225/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:4381137/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:5340228/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt < 2:2691766/140‑1 (MQ=255) gTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCaa < 1:4031375/140‑1 (MQ=255) gTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCaa < 2:2032533/140‑1 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:531467/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcg < 2:2541942/140‑1 (MQ=255) tCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcgg < 1:1372771/140‑1 (MQ=255) cGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGt > 1:1772002/1‑140 (MQ=255) gTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑G‑CCGCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTc > 2:3090854/1‑140 (MQ=255) tctcGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTcc > 1:3038806/1‑140 (MQ=255) gcgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgt < 2:1027554/140‑1 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt < 1:5046713/140‑1 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGAA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCAAgtt > 1:3743109/1‑140 (MQ=255) cgcACTACATCAGGCATAAATCGCGCATTGCGCCCCATGTAACCGTTTGTGATCTCACTCACATTACGCA‑C‑GCCC‑CGGGTCATCAAGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCTGCAGGCCACgtt < 2:4936373/140‑1 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCCATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 2:2405680/140‑1 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:3896982/140‑1 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:638389/140‑1 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:2287255/140‑1 (MQ=255) cacgCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAg < 2:3839471/137‑1 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg < 1:1157143/140‑1 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg < 1:2218053/140‑1 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:3630450/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:3440628/1‑140 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga > 1:787712/1‑140 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga > 2:391139/1‑140 (MQ=255) tacattgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgag < 2:1612466/137‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:4355016/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 2:4221851/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 1:4519856/1‑140 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:1612903/140‑1 (MQ=255) ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt < 1:1548485/140‑1 (MQ=255) cgcattgcggCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTAGTTCATCTGCTTGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 2:3576535/1‑140 (MQ=255) gctttgcgcCCCATGTAACGGTTGGTCGTCTCAATCACATTACGCA‑C‑GTCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATAAACGCATACTGATCAAGGCGGCAGTACCCGTTGTTTTTAAAGCCGCGGAGATCaag > 2:4102563/4‑139 (MQ=255) gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAat > 1:4261871/1‑140 (MQ=255) cattgcgcCCCATATAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAata < 1:4378203/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAGCAATATGCAg > 1:1490488/1‑140 (MQ=255) cATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCt > 1:5247524/1‑140 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 2:2218898/140‑1 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 1:267235/140‑1 (MQ=255) cGGTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGc > 1:5601467/1‑140 (MQ=255) ggTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 1:4424939/140‑1 (MQ=255) ggTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 2:610022/140‑1 (MQ=255) ggTTGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 2:193146/140‑1 (MQ=255) ttGGTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 1:469170/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑CGG‑CC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGACGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:5019672/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGa > 2:3211959/1‑137 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGa < 1:3211959/137‑1 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:4783399/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:4139939/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:1925291/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:866424/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:931454/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:4232527/1‑140 (MQ=255) gTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg > 2:4616395/1‑135 (MQ=255) gTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 1:4616395/135‑1 (MQ=255) gTCATCTCAATCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgt > 2:2294061/1‑140 (MQ=255) aTCACATTACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:2631264/140‑1 (MQ=255) aTCACATGACGCA‑C‑GCCC‑CGGTTCCGCAGGTCGTTCGTCTACGGGCAAATGAACGAATACTGATCAATGCGGCAGTCCACGTGGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCCCATGGGCTAGGGTGTAAACCGt < 2:547719/140‑1 (MQ=255) ttACGCA‑C‑GCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATc > 2:5551146/1‑140 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGCGATCAATATGCAGATGCTCATGGGCGAGGGTGTACCCCGTCGGATCaa < 2:3326829/140‑1 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:4424647/140‑1 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:2783646/140‑1 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:2362270/140‑1 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:562140/140‑1 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:4923167/140‑1 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:5179736/140‑1 (MQ=255) acgca‑c‑gcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:1224021/140‑1 (MQ=255) | CACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCA‑C‑G‑CC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508998‑3509270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |