| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,449,793 | +T | pseudogene (3757/3779 nt) | tamB → | autotransporter assembly complex protein TamB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,449,791 | 1 | . | T | 98.1% | 1579.6 / 15.6 | 434 | pseudogene (3755/3779 nt) | tamB | autotransporter assembly complex protein TamB |
| Reads supporting (aligned to +/- strand): ref base . (7/1); new base T (252/169); total (263/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 459 total aligned reads displayed.
GTCAGCGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGA‑TT‑GCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTA > NZ_CP025268/4449652‑4449924 | gTCAGCGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGa > 2:607700/1‑140 (MQ=255)gTCAGCGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGa > 1:3793875/1‑140 (MQ=255)gTCAGCGGCTATGTATTGCCAGGTCTGCAAGGGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGa > 2:1761358/1‑140 (MQ=255) tCAGCGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGA‑t < 1:3986010/140‑1 (MQ=255) aGCGGCTATGTATTGCCAGGGCTGCAAGGGAAATACGGCGTGGGGATAGTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCGATATCGGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGA‑tct > 2:4680075/1‑138 (MQ=255) gCGGCTATGTATTGCCAGGTATGCAAGTGAAATACGGCGTGGGTCTATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGACGTGTCTGGTGTAGACCAGGCACTGGA‑tttg < 2:4263610/140‑3 (MQ=255) cGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGA‑tttgc > 1:4494595/1‑137 (MQ=255) ttATGTATTGCAATGTGTGCAACTGAAATATGGCGTGGGTATATTTGCCTCTATAGCAACACTCACGTTACGTTATCGCCTTATGCCTAAGCTATATCTGGACGCCGTGTCTGGTGTAGAACAGGCACTGGATTT‑Gctct < 2:3104706/139‑1 (MQ=255) aTGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTAt < 1:2281286/140‑1 (MQ=255) aTGTATTGCCAGGTCTGCAAGTGAAATACGGCGTCGGTATATTTGACTCTATAGCAACACGCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTAt < 1:1351712/140‑1 (MQ=255) ttGCCAGGTCTGCAAGTGCAATCCGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGtt < 2:856617/140‑1 (MQ=255) ttGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATCGCCACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGtt < 2:2171100/140‑1 (MQ=255) ttGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGtt < 1:1567201/140‑1 (MQ=255) ttGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGtt < 1:4168505/140‑1 (MQ=255) gCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGTCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCg < 1:5413802/140‑1 (MQ=255) gCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCg < 2:2434771/140‑1 (MQ=255) ccAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGa > 1:2670288/1‑140 (MQ=255) ccAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGCGTCTAGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGa > 1:3324415/1‑140 (MQ=255) ggTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGGTGCCTAAGCTATATCTGGAAGAGGTGTCGGGGGTAGACCAGTCAGTGGATTT‑GCTCTATCAGTTCGAggt > 2:1318383/1‑138 (MQ=255) ggTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGtt > 2:5501776/1‑140 (MQ=255) tCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGtttt > 1:624453/1‑140 (MQ=255) tCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTGATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGtttt > 2:2999054/1‑140 (MQ=255) tGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTag < 1:756515/140‑2 (MQ=255) tGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTag > 2:5178037/1‑139 (MQ=255) gAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCCCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCg < 1:455930/140‑1 (MQ=255) aaaTACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTATACCAGGCACTGGATTT‑GCTCTAGCAGTTCGGGTTTTAGCAATGCGa > 2:3377250/1‑140 (MQ=255) cGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTTTATCAGTTCGAGTTTTAGCAATGCGAATATTTGt > 2:707018/1‑140 (MQ=255) gTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTc < 1:4129770/140‑1 (MQ=255) tGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTCGCAATGCGAATATTTGTCt > 2:2055349/1‑140 (MQ=255) tggctctATAGCAACACTCATGTTACGTTACCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGttt < 2:1416876/137‑1 (MQ=255) tGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGttt < 2:781469/140‑1 (MQ=255) aCTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTAc > 2:5579903/1‑140 (MQ=255) ctctATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACg > 2:4886981/1‑140 (MQ=255) ctctATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACg > 1:1041734/1‑140 (MQ=255) tctATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGc > 2:2792784/1‑140 (MQ=255) ataGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTTTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCcac > 2:4506463/1‑140 (MQ=255) taGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATATGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCTAGTTTTAGCAATGCGAATATTTGTCTACGTCAGTTTAGTCcaca > 2:1611255/1‑140 (MQ=255) gCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTACCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACAGCAGTTTCCGCCacaaa < 2:1182787/140‑1 (MQ=255) aaCACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCacaaaca < 2:2855291/140‑1 (MQ=255) cacTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAg > 1:3679771/1‑140 (MQ=255) cacTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAg > 1:4362676/1‑140 (MQ=255) cacTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAg > 2:3641178/1‑140 (MQ=255) cacTCACGGTACATTATCGCCTGATACCTAAGAGATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTAGAGCAGTTCGAGCTTTAGCAAGGCGAATATGTGACCGCGGTGGGTTACGCCacaaacaaa > 2:2217388/1‑139 (MQ=255) cTCATGTTAAGTTATCGGCTGATGCCTCAGCTAGATCTGGAAGCCGTGTCTGGTGTAGACAAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGCATATTTGTCTACGGACGTGTACGCCTCAAACAAGGc > 2:4095826/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGTCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACACACAAGGc > 1:1823895/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCacaaa > 2:5219577/1‑134 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc > 2:2550936/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc > 1:5125209/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc > 1:2907848/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc > 2:384929/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc > 1:1180887/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTAGAAGCCGTGCCTGGTGTAGACCAGGCACTGGA‑TTCGCTCTATCAGTTCGAGTTTTAGAAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc > 2:1363744/1‑140 (MQ=255) cTCACGTTACGTTATCGCCTGATGCCTAAACTGTATCTGGAAGCCGTGTCTGGAGTAGACCATGCGCTGGATTT‑GCGCTATCAGTTCGAGATTTAGCAATGCGAATATTTGTCTACGGCAGTTTAGGCCACACACAAGGc > 2:1078220/1‑140 (MQ=255) cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCGCTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAACCAAGGCaa < 1:4055355/140‑1 (MQ=255) cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa < 1:1396337/140‑1 (MQ=255) cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa < 1:2313140/140‑1 (MQ=255) cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa < 1:2627462/140‑1 (MQ=255) cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa > 1:4874728/1‑140 (MQ=255) cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa > 1:4629924/1‑140 (MQ=255) gttacgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAg > 2:3459019/1‑140 (MQ=255) ttacgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGt < 1:147955/140‑1 (MQ=255) tacgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATAGTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTc < 2:1893837/140‑1 (MQ=255) tCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGAt < 2:3165954/140‑1 (MQ=255) tCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGAt < 2:1470182/140‑1 (MQ=255) tGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCa > 2:4798557/1‑140 (MQ=255) gATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCaa < 1:5286335/140‑1 (MQ=255) tGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATg < 1:4756206/140‑1 (MQ=255) aGCTATATATGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCGCGATCAGTGCGAGGTTTATCAATGCGAATATTTATCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGt > 2:4988108/1‑140 (MQ=255) tatCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTg > 1:4691636/1‑140 (MQ=255) atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTgg > 1:3012730/1‑140 (MQ=255) atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTgg > 1:1163342/1‑140 (MQ=255) ggAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGa > 1:815794/1‑140 (MQ=255) gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAt > 2:2643603/1‑140 (MQ=255) gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAt > 1:1882497/1‑140 (MQ=255) gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAt > 1:3597222/1‑140 (MQ=255) gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAt > 1:607673/1‑140 (MQ=255) aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAtt > 1:707237/1‑140 (MQ=255) aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAtt > 1:283264/1‑140 (MQ=255) aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGATCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCACTTACTGGGCGAtt > 1:1085588/1‑140 (MQ=255) aGCCGTGTCTGGTGTAGAACAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTGTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAttt < 2:3991637/140‑1 (MQ=255) ccGTGTCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCa > 1:1972973/1‑140 (MQ=255) tgtCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTa < 1:5054264/140‑1 (MQ=255) gtCTGGTGTAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTAt < 1:3378987/140‑1 (MQ=255) gtgtAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATa < 2:1824144/140‑1 (MQ=255) gtgtAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATa < 1:2465970/140‑1 (MQ=255) tgtAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATaa > 1:4192362/1‑140 (MQ=255) tAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACt < 2:4379712/140‑1 (MQ=255) tAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACt < 1:1706030/140‑1 (MQ=255) tAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACt < 2:5328475/140‑1 (MQ=255) tAGACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACt > 1:4303383/1‑140 (MQ=255) gACCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTAc > 2:3957977/1‑140 (MQ=255) aCCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTAcc > 2:3747983/1‑140 (MQ=255) aCCAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTAcc > 1:2154519/1‑140 (MQ=255) ccAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACACACATGGAAACAGTCACTGGCTGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCa < 1:3095578/140‑1 (MQ=255) ccAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCa < 1:554342/140‑1 (MQ=255) ccAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCa < 1:3459019/140‑1 (MQ=255) cAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCTACAAACAAGCCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCac < 2:5147186/140‑2 (MQ=255) cAGGCACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAg < 1:857559/140‑1 (MQ=255) cACTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGt < 2:1252016/140‑1 (MQ=255) aCTGGATTT‑GCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGta < 1:2197324/140‑1 (MQ=255) | GTCAGCGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGA‑TT‑GCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTA > NZ_CP025268/4449652‑4449924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |