| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,013,596 | T→C | pseudogene (539/542 nt) *370* (TAA→TAG) |
zapC → ycbX ← |
cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,013,596 | 0 | T | C | 98.9% | 897.6 / ‑4.6 | 272 | pseudogene (539/542 nt) *370* (TAA→TAG) | zapC ycbX | cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base C (160/108); minor base G (3/0); total (164/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 272 total aligned reads displayed.
CCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TT‑GGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCCG > NZ_CP025268/1013461‑1013732 | tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 2:2139473/140‑1 (MQ=255) tGCGTGCTGGCACAAACCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACAGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa > 2:961777/1‑140 (MQ=255) tGCCTGCTGGCACAACCCTGCGTTGTTATTGCGCGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCTCAAGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa < 2:3091410/140‑1 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTATCGCGCCAACTTAAGTg < 2:4058754/140‑1 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 2:271700/140‑1 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 2:1621245/140‑1 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 2:1262459/140‑1 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 1:2364878/140‑1 (MQ=255) cacaCCCCGGCGTTGCTATTGCGGGTCGCGCGCTGCAG‑TTGGGCGACGCCATTAAAATCATGAACGCCAGGCTGAAAACGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGCGCa < 2:1021947/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGGCATTAGAATCATGAACGACAGGCTGAAACCGCAGGTTAGGGTTTACAGCTTCAGCCGCGAACAGGCAGTCTAGCGCGCCAACTGAAGTggg > 2:4670432/1‑138 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACATGCAGTCTAACGCGCGAACTTAAGTGCa > 1:301240/1‑140 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa < 1:2941276/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 1:3296039/1‑140 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa < 1:1686607/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa < 1:1919877/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 2:3674822/1‑140 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 1:1638778/140‑1 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 2:1694958/140‑1 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 1:4794909/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 1:5546976/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 1:1045678/140‑1 (MQ=255) ccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTc > 2:712158/1‑140 (MQ=255) ccTGCGTTGTGATTGCGGGTCGCGCGATGCAG‑TTGGGCGGCGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCGTCAGCCTCGAACAGGCGGTCTAACGCGCCAAGTTAAGTGCAGTCTTc < 2:5165713/140‑1 (MQ=255) tGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGAGCAGTCTTCgg > 1:3324604/1‑140 (MQ=255) gCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg > 2:3202325/1‑129 (MQ=255) gCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 1:3202325/129‑1 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 1:4873506/140‑1 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 2:3292440/140‑1 (MQ=255) cGTTGTTATTGCAGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 1:4786606/140‑1 (MQ=255) gttgttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTac < 1:3760828/140‑1 (MQ=255) ttgttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTaca < 2:1167751/140‑1 (MQ=255) tgttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTacac > 1:5185701/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGGAGATG‑GGAGACGCCAGTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCGAACTCGCCAACTTGAGTGCGGTCGTCGGTaccgag > 2:317185/1‑136 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGTACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAAGATAAGTGCAGTCTTCGGTACGCAg > 2:4411865/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:2552493/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:2806726/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:2008987/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:2987689/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:5381076/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:542489/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:3397757/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:3380838/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:2406138/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:278342/1‑140 (MQ=255) ttGCGGGTCGCGCGCTGCAG‑TTGGGCGCCGCCATTAAAATCATGCACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 2:5067831/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 2:1958513/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 2:1460958/140‑1 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa > 1:3189404/1‑140 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa > 2:4655508/1‑140 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa > 1:2695345/1‑140 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCGCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa > 1:5005102/1‑140 (MQ=255) tCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGACCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCTAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa < 2:3581909/140‑1 (MQ=255) tCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACCGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGGACACAGCTACAGCaaa > 1:3530744/1‑140 (MQ=255) tCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa > 1:4358598/1‑140 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa > 1:742708/1‑140 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa < 2:4522480/140‑1 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa < 2:4076693/140‑1 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa > 1:4483317/1‑140 (MQ=255) gCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGc < 1:2319262/140‑1 (MQ=255) ttgtgctaCGCCCTTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGCACAGGCAGTCTACCGCGCAACCTTCAGTGCAGACTTCGGTAAACAGCTACAGCAAAGCATCGTGCcatc > 2:2966251/8‑140 (MQ=255) ttgggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTGTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatc > 1:4470676/4‑140 (MQ=255) gggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGCGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatcat > 2:4578202/2‑140 (MQ=255) ggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCatcatc < 2:5507014/140‑1 (MQ=255) gCGACGCCATTAAAATCATGACCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCg > 1:2429581/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 2:907092/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 1:3041054/1‑140 (MQ=255) gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGcc < 1:2871781/140‑1 (MQ=255) cGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCTAACTTAAGTGCAGTCTGCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa > 2:2646789/1‑140 (MQ=255) cGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCATCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa > 2:4771995/1‑140 (MQ=255) ccATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTGAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCAtt > 2:2198848/1‑140 (MQ=255) tAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTg < 2:4864957/140‑1 (MQ=255) aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACATGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGTTGTCATCATCGCCCATTGCTGAtttttt > 2:3710634/1‑140 (MQ=255) aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAtttttt > 1:4007819/1‑140 (MQ=255) aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAtttttt > 1:563739/1‑140 (MQ=255) gAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCa > 1:175472/1‑140 (MQ=255) aCAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggc < 2:2339792/140‑1 (MQ=255) aCAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggc < 1:359921/140‑1 (MQ=255) cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggcg > 2:1869024/1‑140 (MQ=255) cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggcg > 2:701781/1‑140 (MQ=255) aCCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGc < 2:5387205/140‑1 (MQ=255) aCCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGc < 1:1237013/140‑1 (MQ=255) aCCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGc < 2:4300016/140‑1 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTc > 1:3442716/1‑140 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTc > 1:869972/1‑140 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCAGCGCCCATTGCTGATTTCTTCAGCGGCGTGACTTCGCCTTc > 1:5131238/1‑140 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCATCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGATGATTTTTTCAGCGGCGTGACTTCGCCTTc > 2:5255001/1‑140 (MQ=255) gTTAATGTTCACAGCTTCAGCCTCAAAAAGCCACTCTAACGCGACCACTTAAGTGCAGGCTACCGCACACAGCTCCAGGAAAGAATGGTGCCATCATCGCCCATTGCCGATTTTTTCAGCGGCCTGCCTTCGCCTTCTaa < 2:4986285/140‑1 (MQ=255) aaTGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAg < 1:2546121/140‑1 (MQ=255) aaTGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAg > 2:2019364/1‑140 (MQ=255) aaTGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAg < 2:5049685/140‑1 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCTCCAACGTAAGTGCAGTCTTCGGGACACAGCTACAGCAAATAATGGTGCCATCATCACCCATTGCTGAGTTTTTCAGCGGCGTGACTGCGCCTTCGAAAAGCGGaaga > 1:2165653/1‑138 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:3838101/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 2:3858533/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:2608544/1‑140 (MQ=255) tCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGc < 2:14010/138‑1 (MQ=255) gAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATAGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCcaca > 1:5235170/1‑140 (MQ=255) aaCAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCACCTTCCACaa > 2:4506529/1‑140 (MQ=255) gCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGc < 1:1451213/124‑1 (MQ=255) gCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGcc > 1:4154428/1‑140 (MQ=255) aGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCcg < 2:3447189/140‑1 (MQ=255) | CCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TT‑GGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCCG > NZ_CP025268/1013461‑1013732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |