BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,537,864	T→C	intergenic (+93/‑7)	CXP41_RS08140 → / → pptA	ISAs1‑like element ISEc5 family transposase/tautomerase PptA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,537,864	0	T	C	100.0%	998.5 / NA	300	intergenic (+93/‑7)	CXP41_RS08140/pptA	ISAs1‑like element ISEc5 family transposase/tautomerase PptA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (159/141); total (159/141)

Only 100 of 300 total aligned reads displayed.

AAACTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGTGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCATTGCT  >  NZ_CP025268/1537729‑1537999

aaaCTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTaa                                                                                                                                     >  1:2820044/1‑140 (MQ=255)

aaaCTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTaa                                                                                                                                     <  1:3769571/140‑1 (MQ=255)

aaaCTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTaa                                                                                                                                     >  1:4211805/1‑140 (MQ=255)

   cTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCa                                                                                                                                  <  2:2820044/140‑1 (MQ=255)

      ccTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGc                                                                                                                               >  1:1735227/1‑140 (MQ=255)

      ccTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCGTTACCGGACACATGACATTCACAATGTGTGCTAACTTTACTCACATCTTCCAAAACGAGCGTAATCATGc                                                                                                                               >  2:3826885/1‑140 (MQ=38)

          gCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGca                                                                                                                           >  1:3437119/1‑140 (MQ=255)

              cAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATc                                                                                                                       >  2:785902/1‑140 (MQ=255)

              cAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATc                                                                                                                       <  1:3639066/140‑1 (MQ=255)

               aGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCg                                                                                                                      <  1:2254669/140‑1 (MQ=255)

               aGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCg                                                                                                                      >  2:1900742/1‑140 (MQ=255)

                gTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACAGTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGa                                                                                                                     >  1:4943656/1‑140 (MQ=255)

                 tCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGAc                                                                                                                    >  1:4150999/1‑140 (MQ=255)

                     tACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTAACGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCTTGCCGCACATCGACATTa                                                                                                                >  2:3986784/1‑140 (MQ=255)

                           gAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGtt                                                                                                          >  1:806673/1‑140 (MQ=255)

                           gAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGtt                                                                                                          >  1:5099087/1‑140 (MQ=255)

                           gAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGtt                                                                                                          >  2:1030789/1‑140 (MQ=255)

                            aGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGttt                                                                                                         <  1:4524926/140‑1 (MQ=255)

                            aGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGtta                                                                                                         <  2:5418722/140‑2 (MQ=255)

                              cGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTc                                                                                                       >  2:84456/1‑140 (MQ=255)

                              cGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTc                                                                                                       >  1:2358111/1‑140 (MQ=255)

                                 gCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCcgc                                                                                                    <  1:2631743/140‑1 (MQ=255)

                                      cctAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGaa                                                                                               <  2:2937204/138‑1 (MQ=255)

                                      cGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGaa                                                                                               <  2:5453702/140‑1 (MQ=255)

                                               gCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGaa                                                                                      >  2:1538178/1‑140 (MQ=255)

                                               gCCCTGGGCATTATTGTCGTATAAACGCTTCACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGaa                                                                                      >  2:4615172/1‑140 (MQ=255)

                                                    gggCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAacaaca                                                                                 <  1:5444206/140‑1 (MQ=255)

                                                     ggCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAAcaacaa                                                                                >  2:2754030/1‑140 (MQ=255)

                                                     ggCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAAcaacaa                                                                                >  2:1652115/1‑140 (MQ=255)

                                                           attGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAagca                                                                          <  2:135946/140‑1 (MQ=255)

                                                                    taAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTtgct                                                                 <  1:2303824/140‑1 (MQ=255)

                                                                    taAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTtgct                                                                 <  2:1069100/140‑1 (MQ=255)

                                                                            ttACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGatat                                                         >  1:581703/1‑140 (MQ=255)

                                                                            ttACCGGACACATGACATTCACAATGTGAGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATAATGCCGCACATCGACATTAAATGTTTTCCGCGGGAACTGAACGAACAAAAAAAAGCAGCACTTGCGGCAGatat                                                         >  2:531729/1‑140 (MQ=255)

                                                                             tACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATAtt                                                        >  1:1882713/1‑140 (MQ=255)

                                                                              aCCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTa                                                       >  2:3627539/1‑140 (MQ=255)

                                                                                cGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTAcc                                                     <  1:2969830/140‑1 (MQ=255)

                                                                                       aTGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGtta                                              >  1:350512/1‑140 (MQ=255)

                                                                                       aTGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGtta                                              >  1:2712277/1‑140 (MQ=255)

                                                                                        tGACATTCACAATCTGAGTTAATTTTACTGACATCTTACAAAAGGAGCGTAATCATGACGCACATCGCCATTAAATGTTTTCCGTGGGAACTAGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGttat                                             <  2:4443225/140‑1 (MQ=255)

                                                                                         gACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGttatt                                            >  1:2151638/1‑140 (MQ=255)

                                                                                         gACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGttatt                                            >  2:3858489/1‑140 (MQ=255)

                                                                                           cgttaacaATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCGTGCGGAACATCGGCATTAAATGTTTTCGGCGTGAACTGGGCGAAAAACAAAGAGCAGCACGTGCTGCAGTTATTACCGACGTgattat                                          >  2:4782248/6‑140 (MQ=255)

                                                                                            aTTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTattatt                                         >  2:4376779/1‑140 (MQ=255)

                                                                                            aTTCACAATGTGTGTTAATTTTACTGACATCGTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGttagtctt                                         >  1:1249991/1‑135 (MQ=255)

                                                                                             ttCACAATGTGTTTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCCACATTAAATCTTTCCCGCGTGAACTGCACGCCCAACAAAACGCAGCCCTTGCCGCAGATATCCCCGACGTTATTACTc                                        <  2:1237660/140‑1 (MQ=255)

                                                                                             ttCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTc                                        <  1:4463900/140‑1 (MQ=255)

                                                                                              tCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATAAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCg                                       >  1:4440091/1‑140 (MQ=255)

                                                                                               cacaATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGt                                      >  2:4557951/1‑140 (MQ=255)

                                                                                               cacaATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGt                                      <  1:1484623/140‑1 (MQ=255)

                                                                                               cacaATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGt                                      >  1:1368070/1‑140 (MQ=255)

                                                                                                  aaTGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCAt                                   <  2:5272731/140‑1 (MQ=255)

                                                                                                   aTGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATc                                  >  1:3212680/1‑140 (MQ=255)

                                                                                                   aTGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACAGCGACATTAAATGTTTTCCGCGTGAAATGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGCCATc                                  >  2:410370/1‑140 (MQ=255)

                                                                                                    tgtgtgTTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGAACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGGCATCt                                 <  1:4513767/140‑1 (MQ=255)

                                                                                                      tgtttTAATTTTACTCACATCTTTCAAAAAGAGCGTAATCATGCCCCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAAAAACAAACAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  2:2617183/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTCATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACGGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  1:859854/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  1:1030789/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  2:4193525/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  2:3065030/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  1:1227105/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  1:1067258/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  1:5281743/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               >  1:1451843/1‑140 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACGGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               <  1:4752173/140‑1 (MQ=255)

                                                                                                      tgtgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACAGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               >  2:4928303/1‑140 (MQ=255)

                                                                                                        tgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCg                                                                                                                             >  1:1320016/1‑44 (MQ=255)

                                                                                                        tgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAAc                             >  1:3959753/1‑140 (MQ=255)

                                                                                                        tgtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAAc                             >  2:5221587/1‑140 (MQ=255)

                                                                                                         gtTAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACa                            >  2:598818/1‑140 (MQ=255)

                                                                                                           tAATTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGt                          <  2:1996994/140‑1 (MQ=255)

                                                                                                            aaTTTTACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTa                         >  2:3739214/1‑140 (MQ=255)

                                                                                                                ttACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGa                     >  2:5160072/1‑140 (MQ=255)

                                                                                                                ttACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGa                     <  1:1601593/140‑1 (MQ=255)

                                                                                                                ttACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGa                     <  1:4615172/140‑1 (MQ=255)

                                                                                                                ttACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGa                     >  1:2321747/1‑140 (MQ=255)

                                                                                                                ttACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGa                     <  1:2774882/140‑1 (MQ=255)

                                                                                                                ttACTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACACTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGa                     <  1:3345179/140‑1 (MQ=255)

                                                                                                                  aCTGACATCTTTCAAAAGGAGCGTAATCATGCCGCCCATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGAcg                   >  1:4274889/1‑139 (MQ=255)

                                                                                                                  aCTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGa                               >  2:4173285/1‑128 (MQ=255)

                                                                                                                  aCTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACa                   >  1:5184342/1‑140 (MQ=255)

                                                                                                                  aCTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACa                   >  1:2545043/1‑140 (MQ=255)

                                                                                                                  aCTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACa                   >  2:3897512/1‑140 (MQ=255)

                                                                                                                  aCTGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACa                   >  2:1269909/1‑140 (MQ=255)

                                                                                                                    tGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGt                 <  2:229729/140‑1 (MQ=255)

                                                                                                                    tGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGt                 <  2:1874114/140‑1 (MQ=255)

                                                                                                                    tGACATCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGt                 <  2:3561568/140‑1 (MQ=255)

                                                                                                                    tGACAGCTTTCAAAAGGAGCGTGATCATGCCGCACATCGAAATTAAATGTTTTCCGCTTGAACTGGCCGAACAACAAAAAGCAGCACGTGCTGCAGATATTACCGACGTTCTTATTCGTCATCTGAACAGTAAAGACAGt                 <  2:3678080/140‑1 (MQ=255)

                                                                                                                        aTCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGa             >  2:3480631/1‑140 (MQ=255)

                                                                                                                        aTCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGa             <  2:5549274/140‑1 (MQ=255)

                                                                                                                        aTCTTTCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGa             >  1:2421579/1‑140 (MQ=255)

                                                                                                                           tttCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGGTCGATaa          >  1:2060493/1‑140 (MQ=255)

                                                                                                                            ttCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTCCCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAg         <  2:163725/140‑1 (MQ=255)

                                                                                                                            ttCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAg         <  2:2884253/140‑1 (MQ=255)

                                                                                                                            ttCAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAg         <  2:4473236/140‑1 (MQ=255)

                                                                                                                              cAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCa       <  1:5250931/140‑1 (MQ=255)

                                                                                                                              cAAAAGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCa       <  2:2211650/140‑1 (MQ=255)

                                                                                                                              cAAAAGGAGCGTAATCATGCCGAACACCGCCATTAAATGTCTTCCGCGTGACCTGGACGAACAACACAACACAGCCCTTGCTGCAGATATTCCCGACGTTATTATTCGTCATCTCAACAGTAAAGTCAGTTCGATAAGcc       <  2:1776666/140‑2 (MQ=255)

                                                                                                                               aaaaGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCAt      <  2:238231/140‑1 (MQ=255)

                                                                                                                               aaaaGGAGCGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCAt      <  1:2030546/140‑1 (MQ=255)

AAACTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAATCTTGCCCTGGGCATTATTGTCGTATAAACGCTTTACCGGACACATGACATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGTGTAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCATTGCT  >  NZ_CP025268/1537729‑1537999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`