BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,762,540	T→C	pseudogene (1000/1000 nt)	ldtE ←	L,D‑transpeptidase LdtE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,762,540	0	T	C	100.0%	1135.4 / NA	338	pseudogene (1000/1000 nt)	ldtE	L,D‑transpeptidase LdtE
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (184/154); total (184/154)

Only 100 of 338 total aligned reads displayed.

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGC‑‑‑‑‑TTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCT  >  NZ_CP025268/1762403‑1762670

ttCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTa                                                                                                                                       <  1:3787655/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                                <  1:659726/140‑1 (MQ=255)

        gctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCa                                                                                                                               >  2:2321431/1‑140 (MQ=255)

          tAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcg                                                                                                                             <  2:3671452/140‑1 (MQ=255)

          tAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcg                                                                                                                             >  1:3636377/1‑140 (MQ=255)

           aaaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgc                                                                                                                            <  1:767506/140‑1 (MQ=255)

            aaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                           <  1:4933691/140‑1 (MQ=255)

            aaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                           <  1:4136418/140‑1 (MQ=255)

            aaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                           <  2:3496041/140‑1 (MQ=255)

            aaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                           <  2:3010298/140‑1 (MQ=255)

             aGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGt                                                                                                                          <  2:5333431/140‑1 (MQ=255)

              gATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTa                                                                                                                         <  2:5282445/140‑1 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACCACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                    >  2:1854961/1‑140 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                               <  1:2210500/140‑1 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                               >  1:457213/1‑140 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGAAAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAACTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                               <  2:1498485/140‑1 (MQ=255)

                         tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCt                                                                                                              <  1:1850275/140‑1 (MQ=255)

                         tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCt                                                                                                              <  1:1325080/140‑1 (MQ=255)

                             gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt                                                                                                          <  2:2511012‑M1/140‑2 (MQ=255)

                             gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt                                                                                                          <  2:436170‑M1/140‑2 (MQ=255)

                              cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTACCATATTCCCTTGCtc                                                                                                         <  1:3220909‑M1/140‑3 (MQ=255)

                              cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtc                                                                                                         <  1:5335279‑M1/140‑3 (MQ=255)

                              cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtc                                                                                                         <  1:3037206‑M1/140‑3 (MQ=255)

                                 aCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctgg                                                                                                      >  1:2920269‑M1/1‑135 (MQ=255)

                                  ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggt                                                                                                     >  2:5473980‑M1/1‑134 (MQ=255)

                                  ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggt                                                                                                     >  2:2075298‑M1/1‑134 (MQ=255)

                                  ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggt                                                                                                     >  1:3554529‑M1/1‑134 (MQ=255)

                                     gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca                                                                                                  <  1:4814523‑M1/140‑10 (MQ=255)

                                     gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca                                                                                                  <  1:2068721‑M1/140‑10 (MQ=255)

                                     gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTGTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca                                                                                                  <  2:3429812‑M1/140‑10 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtttggttcac                                                                                                 >  2:673420‑M1/1‑130 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac                                                                                                 >  1:2794307‑M1/1‑130 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac                                                                                                 >  1:4606461‑M1/1‑130 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac                                                                                                 >  2:4457162‑M1/1‑130 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac                                                                                                 >  2:2050329‑M1/1‑130 (MQ=255)

                                          tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccatt                                                                                             <  1:3963011‑M1/140‑15 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc                                                                                       <  1:1479630‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc                                                                                       >  1:4413456‑M1/1‑120 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc                                                                                       <  2:2920267‑M1/140‑21 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct                                                                                      <  2:1720898‑M1/140‑22 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct                                                                                      >  1:4197827‑M1/1‑119 (MQ=255)

                                                    ggCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgac                                                                                   <  1:5467973‑M1/140‑25 (MQ=255)

                                                      ctactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactc                                                                                 >  2:3909677‑M1/1‑114 (MQ=255)

                                                      ctactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactc                                                                                 >  1:4794072‑M1/1‑114 (MQ=255)

                                                           aaaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgagctgactctactg                                                                            >  2:4853334‑M1/1‑109 (MQ=255)

                                                               aCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaagg                                                                        >  1:1611061‑M1/1‑105 (MQ=255)

                                                                ccGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggc                                                                       >  1:433708‑M1/1‑104 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCTCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctgggtcaccattctgcgctgactcgactgaaggcgca                                                                    <  2:3957994‑M1/140‑40 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                           >  2:570284/1‑85 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctacttaaggcgca                                                                    >  1:1155277‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca                                                                    >  1:3473500‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca                                                                    >  2:2585585‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca                                                                    >  2:4585834‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATCGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca                                                                    >  2:4615073‑M1/1‑101 (MQ=255)

                                                                      gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctga                                                                                    >  1:3328309‑M1/1‑99 (MQ=255)

                                                                      gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctga                                                                                    <  2:3328309‑M1/122‑24 (MQ=255)

                                                                              aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgc                                                         >  1:2618372‑M1/1‑90 (MQ=255)

                                                                               ccTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcg                                                        <  2:3797533‑M1/140‑52 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcacgattctgcgctgactctactgaaggcgcattgctggctgcgg                                                       >  2:482263‑M1/1‑88 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                                       >  2:4748489‑M1/1‑88 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACCTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                      <  2:3132560‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                      <  1:2265882‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                      >  1:1997325‑M1/1‑87 (MQ=255)

                                                                                  gtgaagtgaaACATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaatgcgcattgctggctgcggga                                                     >  1:940986‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggcttcggga                                                     >  2:1022841‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggg                                                     >  1:5380365‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                     >  2:2231047‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                     >  1:1253631‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                     >  1:1770166‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                     >  2:1146744‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                     >  2:4538054‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                     >  1:5529131‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                     >  1:4728340‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca                                                                                                  >  2:5066730‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca                                                                                                  <  1:5066730‑M1/95‑10 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGATTACCGCTACTGCGTCACGCGTAACATATTCCCTCGCtctggttcaccattctgcgctgactctactgaaggcgcattgctgactgcggga                                                     >  2:4084746‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTCTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGAtctggttcaccattctgcgctgactctactgaaggcgcattgctgcgtccggga                                                     >  2:1334045‑M1/1‑86 (MQ=255)

                                                                                     aagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagtt                                                  >  1:1367688‑M1/1‑83 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                                >  2:794846‑M1/1‑81 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                                >  1:2773759‑M1/1‑81 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                                >  1:4060384‑M1/1‑81 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                                >  2:2777730‑M1/1‑81 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                                >  1:4991906‑M1/1‑81 (MQ=255)

                                                                                         gaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctc                                              <  2:1265583‑M1/140‑62 (MQ=255)

                                                                                               tGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgc                                        <  2:4178141‑M1/140‑68 (MQ=255)

                                                                                               tGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgc                                        >  1:2648476‑M1/1‑73 (MQ=255)

                                                                                                   gcACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcac                                    <  1:1346450‑M1/140‑72 (MQ=255)

                                                                                                       aTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa                                <  1:3063165‑M1/140‑76 (MQ=255)

                                                                                                           tgCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg                            >  1:3676104‑M1/1‑61 (MQ=255)

                                                                                                           tgCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg                            >  1:2806654‑M1/1‑61 (MQ=255)

                                                                                                             cgcCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccgga                          >  2:4909629‑M1/1‑59 (MQ=255)

                                                                                                                     tttattGTCTGCCGTTTACCGCTTCTGCGTCACGCGTAACATATTCGCTTGCTCTGGTTCACAATTCTTAGCTGACTCAACTGAAGTCGCATTGCTGGCTGCGGGAGTTGCACCACTGCTCACCGAAACCAGATACCCTg                   <  2:4676751/140‑1 (MQ=255)

                                                                                                                      tttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgc                  >  2:2007544‑M1/1‑51 (MQ=255)

                                                                                                                       ttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcc                 <  2:5580296‑M1/140‑91 (MQ=255)

                                                                                                                          tGTCTGCCGTTTACCGCTACTGAGTCACGCGTAACATATGCCCTTGCtctggttcaccattctgcgctgactctactgaagtcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga              <  2:1922978‑M1/140‑94 (MQ=255)

                                                                                                                              tGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgat          >  2:135208‑M1/1‑43 (MQ=255)

                                                                                                                                 cGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgataca       <  2:211198‑M1/140‑101 (MQ=255)

                                                                                                                                  gTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaa      <  2:5172796‑M1/140‑102 (MQ=255)

                                                                                                                                  gTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaa      <  1:1010347‑M1/140‑102 (MQ=255)

                                                                                                                                      aCCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgct  >  2:1616353‑M1/1‑35 (MQ=255)

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGC‑‑‑‑‑TTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCT  >  NZ_CP025268/1762403‑1762670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`