Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 1,867,449 G→A intergenic (‑205/‑137) msrB ← / → gapA peptide‑methionine (R)‑S‑oxide reductase MsrB/glyceraldehyde‑3‑phosphate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252681,867,4490GA99.2% 924.5 / NA 261intergenic (‑205/‑137)msrB/gapApeptide‑methionine (R)‑S‑oxide reductase MsrB/glyceraldehyde‑3‑phosphate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base A (76/180);  minor base C (2/0);  total (78/183)
Fisher's exact test for biased strand distribution p-value = 9.06e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 261 total aligned reads displayed.

GCAAAATTTTGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGGGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATA  >  NZ_CP025268/1867314‑1867584
                                                                                                                                       |                                                                                                                                       
gCAAAATTTTGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCg                                                                                                                                     >  1:2203325/1‑140 (MQ=255)
 cAAAATTTTGTCCTAACCTTGCTCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGACCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGa                                                                                                                                    <  2:899239/140‑1 (MQ=255)
   acaTTTTGTCCTAAACTGGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATATTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagt                                                                                                                                  <  2:4666375/138‑1 (MQ=255)
   aaaTTTTGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagt                                                                                                                                  <  2:1526528/140‑1 (MQ=255)
      ttttGTCCTAAACTTGATCTCGCCGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagtcag                                                                                                                               <  2:1942443/140‑1 (MQ=255)
      ttttGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagtcag                                                                                                                               <  1:2430961/140‑1 (MQ=255)
      ttttGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagtcag                                                                                                                               <  2:3793649/140‑1 (MQ=255)
      ttttGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagtcag                                                                                                                               <  1:1829069/140‑1 (MQ=255)
      ttttGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagtcag                                                                                                                               <  1:2004173/140‑1 (MQ=255)
      ttttGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGCGAGGCGagtcag                                                                                                                               <  2:5511521/140‑1 (MQ=255)
      ttttGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACACTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGagtcag                                                                                                                               <  1:3085860/140‑1 (MQ=255)
            ccTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGt                                                                                                                         <  1:5529649/140‑1 (MQ=255)
            ccTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGt                                                                                                                         <  1:3498418/140‑1 (MQ=255)
            ccTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGt                                                                                                                         <  2:3881877/140‑1 (MQ=255)
              tAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTaa                                                                                                                       <  1:5336991/140‑1 (MQ=255)
              tAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTaa                                                                                                                       <  1:3429706/140‑1 (MQ=255)
              tAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTaa                                                                                                                       <  1:3380791/140‑1 (MQ=255)
                aaCTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATg                                                                                                                     >  2:1479860/1‑140 (MQ=255)
                aaCTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATg                                                                                                                     >  1:803317/1‑140 (MQ=255)
                aaCTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATg                                                                                                                     >  1:2672830/1‑140 (MQ=255)
                   ttGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCtt                                                                                                                  <  2:3371680/140‑1 (MQ=255)
                   ttGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCtt                                                                                                                  <  2:4176759/140‑1 (MQ=255)
                      aTCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAgg                                                                                                               <  2:109129/140‑1 (MQ=255)
                        ctcGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGca                                                                                                             <  1:504200/140‑1 (MQ=255)
                        ctcGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGca                                                                                                             <  2:1655792/140‑1 (MQ=255)
                        ctcGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGca                                                                                                             <  1:4931711/140‑1 (MQ=255)
                        ctcGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTACCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGca                                                                                                             <  1:641256/140‑1 (MQ=255)
                            acgaAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAgg                                                                                                         >  2:1750623/1‑140 (MQ=255)
                                          ccacaaTCATGATGAACATCACATTTTTGACGTAATTGCCCGTCAAAAGTCGGGGCGACGCCCCCATGTGGTCTCAATTCCAACTTCAGCTTGAGGCCAGCCAGTCGCGTAAGGTTTAGGCACAGGATTGATTTGTTGcc                                                                                           <  2:2514784/136‑2 (MQ=255)
                                          ccTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCa                                                                                           <  1:4491881/140‑1 (MQ=255)
                                               aTCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGAt                                                                                      <  2:1392971/140‑1 (MQ=255)
                                               aTCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGACACAGGATTGATTTGTCGCAATGAt                                                                                      <  2:5007854/140‑1 (MQ=255)
                                                   tgatgaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGc                                                                                            <  1:1766220/130‑1 (MQ=255)
                                                    gatgaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGaca                                                                                 <  2:3319761/140‑1 (MQ=255)
                                                    gatgaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGaca                                                                                 <  1:5433830/140‑1 (MQ=255)
                                                     atgaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGacac                                                                                >  1:4226976/1‑140 (MQ=255)
                                                     atgaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGacac                                                                                >  1:4888620/1‑140 (MQ=255)
                                                     atgaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGacac                                                                                >  1:1441973/1‑140 (MQ=255)
                                                       gaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGa                                                                              <  2:1502708/140‑1 (MQ=255)
                                                       gaAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGa                                                                              <  1:3156318/140‑1 (MQ=255)
                                                       cataaTCTCTTTTTTATCGTAGTTGCCCTTTAAGATTCGCGGCGTCGTCCCCTGTTGGTCTCAACTGCAACGTCAGGGTATTACGAGTCAGTCGCGTAATGCTTATGGACTGGACTGCTCTATCGCGATTATTGgcacat                                                                              <  2:4876713/137‑3 (MQ=255)
                                                         aactCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGAtt                                                                            <  1:1694895/137‑1 (MQ=255)
                                                         aaaTCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGGGGCGCGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGCtt                                                                            <  2:897070/140‑1 (MQ=255)
                                                         aaaTCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGAtt                                                                            <  1:4383893/140‑1 (MQ=255)
                                                         aaaTCACATTTGTCTCGTGATTGCCCTTTAAAATTCGGGGCGCCGGCCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGAtt                                                                            <  2:869315/140‑1 (MQ=255)
                                                                  ttttATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGCGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGAc                                                                   <  2:2970516/140‑1 (MQ=255)
                                                                  ttttATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGAc                                                                   <  1:5245420/140‑1 (MQ=255)
                                                                  ttttATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGAc                                                                   <  2:3988308/140‑1 (MQ=255)
                                                                   tttATCGTAATTGCCCTTTAACATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCGAAAGGAAGAGTTAGGCGAGTCAGTCGCGTAATCCTTAGGCACAGGATTGATGTGTCGCAATGATTGCCACGATTCCGCTTGACg                                                                  <  2:5372331/140‑1 (MQ=255)
                                                                   tttATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACg                                                                  <  1:4416865/140‑1 (MQ=255)
                                                                   tttATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACg                                                                  <  1:4028325/140‑1 (MQ=255)
                                                                   tttATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACg                                                                  <  1:2395931/140‑1 (MQ=255)
                                                                    ttATAGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGGCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCGTAGGCACAGGATTGAGTTGTCGCAATGATTGACACGATTCCGCTTGACGc                                                                 <  1:2941213/140‑1 (MQ=255)
                                                                          tAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAGGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACATGATTCCGCTTGACGCTGCGTa                                                           >  1:2108239/1‑140 (MQ=255)
                                                                            aTTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAg                                                         >  2:3700091/1‑140 (MQ=255)
                                                                            aTTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAg                                                         >  2:2730993/1‑140 (MQ=255)
                                                                                           tCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTa                                          >  1:3740211/1‑140 (MQ=255)
                                                                                            cGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTAc                                         >  2:2218998/1‑140 (MQ=255)
                                                                                             ggggCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACa                                        >  1:3303387/1‑140 (MQ=255)
                                                                                                gcgcCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGc                                     <  1:4076783/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCa                                    <  1:5595952/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCa                                    <  2:276990/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCa                                    <  1:4712261/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTAGCGCTGCGTAAGGTTTTTGTAATTTTACAGGCa                                    <  2:3676247/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGAAGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCTCAATGATTGACACGATTCCGCTTGACGCTGCGTAAAGTTTTTGTCATTTTACAGGCa                                    <  2:2060922/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGCCCAAAAGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGAACAGGATTGATTTGTCGCAATGATTGTCACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCa                                    <  2:4438966/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGCACAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCa                                    <  1:2336659/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAAGACCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCa                                    <  2:316183/140‑1 (MQ=255)
                                                                                                 cgcCGACCCCATGTGGTCTCAACCCCACAGGACGAGCGAGGCGAGACAGTCGCCTAATGCTCAGGCACAAGATTGATTTGTAGCTATAATTGACACGATTCCGCTAGACGCTACGTAAGGTGTTTGTAATTTTACAGGCa                                    <  2:5319023/140‑1 (MQ=255)
                                                                                                   ccGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAAc                                  <  1:1479831/140‑1 (MQ=255)
                                                                                                    cgcccccATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAAcc                                 <  2:582774/137‑1 (MQ=255)
                                                                                                    cGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAAcc                                 <  2:2145805/140‑1 (MQ=255)
                                                                                                           aTGTGGTCTCAAGCCCAAAGGACGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGACTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTAtt                          <  1:4141241/140‑1 (MQ=255)
                                                                                                           aTGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTAtt                          <  1:5481866/140‑1 (MQ=255)
                                                                                                           aTGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTAtt                          <  2:1276386/140‑1 (MQ=255)
                                                                                                           aTGTGGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGCCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGGCGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTAtt                          <  1:5005019/140‑1 (MQ=255)
                                                                                                             gtgGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCa                        <  2:784497/140‑1 (MQ=255)
                                                                                                              tgGTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATACCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCAc                       <  2:3116774/140‑1 (MQ=255)
                                                                                                               ggTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACt                      <  1:1206374/140‑1 (MQ=255)
                                                                                                               ggTCTCAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACt                      <  2:4942338/140‑1 (MQ=255)
                                                                                                                 tctcAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAGTTTTACAGGCAACCTTTTATTCACTaa                    >  2:1617836/1‑140 (MQ=255)
                                                                                                                 tctcAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTaa                    >  1:1923436/1‑140 (MQ=255)
                                                                                                                 tctcAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATGCACTaa                    >  2:354581/1‑140 (MQ=255)
                                                                                                                  ctcAAGCCCAAAGGAAGAGTGAGGCTAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAAc                   >  2:1211514/1‑140 (MQ=255)
                                                                                                                  ctcAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACt                      <  2:5269225/137‑1 (MQ=255)
                                                                                                                   tcAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACa                  >  1:425597/1‑140 (MQ=255)
                                                                                                                   tcAAGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACa                  >  2:4868841/1‑140 (MQ=255)
                                                                                                                     aaGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATGAATTTGTCGCACTGATTGACACGATTCCGCTTGACGCGGCGTAAGGTTGTTGTAATTTTAGAGGGAACCGTTTATTCCCTAACaaa                >  2:2669200/1‑140 (MQ=255)
                                                                                                                      aGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAAt               >  1:3024713/1‑140 (MQ=255)
                                                                                                                      aGCCCAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAAt               >  1:1742990/1‑140 (MQ=255)
                                                                                                                        cccAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAg             >  1:2033965/1‑140 (MQ=255)
                                                                                                                         ccAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGc            <  1:5296793/140‑1 (MQ=255)
                                                                                                                         ccAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGc            <  1:3917286/140‑1 (MQ=255)
                                                                                                                          cAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCt           >  1:965905/1‑140 (MQ=255)
                                                                                                                          cAAAGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCt           >  1:1086190/1‑140 (MQ=255)
                                                                                                                              ggAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAGCAAATAGCtggtg       <  1:1569230/140‑1 (MQ=255)
                                                                                                                              ggAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCtggtg       <  2:1325697/140‑1 (MQ=255)
                                                                                                                              ggAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCtggtg       <  2:119346/140‑1 (MQ=255)
                                                                                                                              ggAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCtggtg       <  2:1789859/140‑1 (MQ=255)
                                                                                                                                 agagTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGaa    >  1:2582366/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                       
GCAAAATTTTGTCCTAAACTTGATCTCGACGAAATGGCTGCACCTAAATCGTGATGAAAATCACATTTTTATCGTAATTGCCCTTTAAAATTCGGGGCGCCGACCCCATGTGGTCTCAAGCCCAAAGGAAGAGTGGGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATA  >  NZ_CP025268/1867314‑1867584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: