| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,088,812 | A→G | G251G (GGT→GGC) | tsuA ← | thiosulfate utilization transporter TsuA/YeeE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,088,812 | 0 | A | G | 98.9% | 1225.3 / NA | 379 | G251G (GGT→GGC) | tsuA | thiosulfate utilization transporter TsuA/YeeE |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (231/143); minor base T (3/1); total (234/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 379 total aligned reads displayed.
CTGGCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACACCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGAT > NZ_CP025268/2088675‑2088946 | cTGGCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGAGCCCTAACACCAGGAAAACGcc > 1:5171172/1‑140 (MQ=255) tGGCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGccc < 1:2380092/140‑1 (MQ=255) ggCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGcccc < 2:710698/140‑1 (MQ=255) ggCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGcccc > 1:5498248/1‑140 (MQ=255) ggCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGcccc > 1:2659576/1‑140 (MQ=255) ggCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGcccc > 2:2973951/1‑140 (MQ=255) ggCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGcccc > 1:4943780/1‑140 (MQ=255) ggCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAACAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGcccc < 1:3108851/140‑1 (MQ=255) gCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCa > 1:4515884/1‑140 (MQ=255) gCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTGGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCa > 1:755248/1‑140 (MQ=255) aCCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGGAGATCCCTAACACCAGGAAAACGCCCCAGt < 1:1894604/140‑1 (MQ=255) aCCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGt > 2:22346/1‑140 (MQ=255) aCCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGt > 1:14617/1‑140 (MQ=255) aCCGAAGCCCATCAGTACACCACCTAACCCGCTACGGAATGTTGTTTGTGCATCAGCTGCGCTAACGCGG‑AACTCAGGGCTGGGTTTGGGTGCAATAAATGACCCCACGAAGATCGCTGACACCAGGAAAACGCCGCAgg > 2:4280452/1‑139 (MQ=255) ccGAAGCCACCCAGCACCCCCCCTACCCCGCTACGTATTGTTGTTGGTGCATCAGCTCCGCGAACGCGG‑AACTAACGGCTCGCTTTGGCTGCAATAAAGGCCCCCACAAAGAT‑CCTAACACCAGGAAAACGCCCCAGTTa < 2:4595021/140‑1 (MQ=255) gAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTaa < 1:3616091/140‑1 (MQ=255) aaGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAAt > 1:4554629/1‑140 (MQ=255) aaGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAAt < 2:4770349/140‑1 (MQ=255) cATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTAtt > 2:1718979/1‑140 (MQ=255) aTCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATACATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTAttt < 2:1068498/140‑1 (MQ=255) tCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTc > 1:3243232/1‑140 (MQ=255) caccacCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGCTAATGTAGTTCATGTCa > 2:924196/1‑140 (MQ=255) caccTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTCGCTGCAATAAATGAACCCACGAAGATCCCTAACACCACGAAAACGCCCCAGTTAATGTATTTCATCTCAgcc > 2:4987137/1‑140 (MQ=255) accTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCcg < 1:3514169/140‑1 (MQ=255) ccTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCcgc > 1:5286824/1‑140 (MQ=255) ccTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCcgc > 1:835915/1‑140 (MQ=255) ccTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCcgc > 2:1752557/1‑140 (MQ=255) ccTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCcgc > 1:3895136/1‑140 (MQ=255) tAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGa < 2:1607039/140‑1 (MQ=255) aaCCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGGAAACCCACGGCTCGCTTTGGCTGCAATAAAGGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCAGGTTAAGGTTTTTCATGTGACCCGCGa > 1:4680434/1‑140 (MQ=255) aaCCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCGACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGAc > 1:4464344/1‑140 (MQ=255) cccGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCa > 2:535898/1‑140 (MQ=255) cGCTACGTAATGTTGTTTGTGCATCTGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGa < 1:5091893/140‑1 (MQ=255) cGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGa > 2:3531007/1‑140 (MQ=255) tACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAAt > 2:1779031/1‑140 (MQ=255) tACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAAt > 1:4752232/1‑140 (MQ=255) tACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAAt > 2:31704/1‑140 (MQ=255) tACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAAt > 2:5248440/1‑140 (MQ=255) tACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAAt > 2:3226645/1‑140 (MQ=255) aCGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAAtt > 1:1571907/1‑140 (MQ=255) aCGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGAAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAAtt > 2:2651053/1‑140 (MQ=255) tAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCa < 1:2219660/140‑1 (MQ=255) tttgtGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATACATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGATAAGGTATCTCATGTCACCCGCGACCAGAACTTGCAGAATATTg > 2:4854098/1‑140 (MQ=255) tttgtGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTg > 1:1708405/1‑140 (MQ=255) ttgtGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTgg > 2:3312818/1‑140 (MQ=255) tgtgCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACTAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTGACCCGCGACCAGAAATTGCAGAATATTGGc < 2:4167737/140‑1 (MQ=255) tgtgCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGc < 1:2140580/140‑1 (MQ=255) tgtgCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGc > 1:4196789/1‑140 (MQ=255) tgCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCg < 2:2465784/140‑1 (MQ=255) cAGCTCCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATACATGCCCCCACGAAGATCCCTAACACCAAGAAACCGCCCCAGTTAATGCATTTCCTGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTggg < 2:2101780/140‑1 (MQ=255) gcgcGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGt < 2:1960089/140‑1 (MQ=255) gcgcGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGt > 1:3187924/1‑140 (MQ=255) gcgcGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGt > 1:4338719/1‑140 (MQ=255) gcgcGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGt < 2:5006146/140‑1 (MQ=255) gcgcGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCAGGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGt > 1:3005039/1‑140 (MQ=255) cgcgAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTg > 2:2753264/1‑140 (MQ=255) cgAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGTAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGAt > 2:4094915/1‑140 (MQ=255) aCGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTcc < 2:1338195/140‑1 (MQ=255) cgcgG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCt > 1:2577584/1‑140 (MQ=255) gcgG‑AACTCACGGCTCGCTTTGGCTGCAATCAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGACGTTGGGGAAGTGGTTCCtc > 2:2561356/1‑139 (MQ=255) gcgG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTa < 1:4180637/140‑1 (MQ=255) g‑AACTCACGGCTCGCTGTGGCTGCAATAAATGACCCCACGTAGATGCATATCACCAGGAAAGCTCCCCAGTTAATGTATTTCATGTTAGCCGCGACCAGAAATTGCTGAATATTGGCAGTTCTGGAAGTTATTCCTTAcc > 2:4389137/1‑140 (MQ=255) aCTCACGGCTCGCTTCGGCTGCAATAAATGACACCACGAAGATCCCTAACACCAGGAAAACGCCGCAGTTAATGTATTTCATCTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCa < 1:3438513/140‑1 (MQ=255) tCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACTCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGt > 2:4689784/1‑140 (MQ=255) gCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTcc < 1:5441527/140‑1 (MQ=255) cTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCg > 1:2757871/1‑140 (MQ=255) ggCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTg < 1:3964156/140‑1 (MQ=255) cTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCt < 2:616016/140‑1 (MQ=255) tGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCtt < 1:2517041/140‑1 (MQ=255) aaTAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCAc > 1:721662/1‑140 (MQ=255) aTAAATGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACt > 1:4609160/1‑140 (MQ=255) aaaTGACCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACAAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCa < 2:2382452/140‑1 (MQ=255) aTGACCCCACGAAGATCCCTAACACCGGGCAAACGCCCCAGTTAGTGTATTTCATGTCAAGCGAGACCAGAAATTGCAGAATATTGGCCGTGGGGGAAGTGATACCGAACCCAAACACGCGTCCGGATGCTTCACTCAgg > 2:3026592/1‑140 (MQ=255) aCCCCACGAAGATCCCTCACGCCAGCAAAACGCCCCAGTTAATGTACTCCATGCCTCCCGCGACCAGACATTGCAGAATCGCGGCCGTTGGGGAAGTGAATCCGAGCCCAAACATGCATCCTGTTGCTTCACTCAGGGGc < 2:1294104/140‑1 (MQ=255) aCCCCACGAAGATCCCTAACCCCACGAAAACCCCCCACTTAATATATTTCATGTCACCCGCGACCCGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGc < 1:12444/140‑1 (MQ=255) aCCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGc < 2:5498248/140‑1 (MQ=255) aCCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGc < 2:367131/140‑1 (MQ=255) aCCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGc < 2:3546468/140‑1 (MQ=255) aCCCCACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGc < 2:5134355/140‑1 (MQ=255) ccccACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGcc > 1:2449595/1‑140 (MQ=255) cACGAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAgg > 1:3300359/1‑140 (MQ=255) gAAGATCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTa < 1:2030370/140‑1 (MQ=255) tCCCTAACACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGAGTCCTAACCCAAACAGGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAgc > 2:539004/1‑140 (MQ=255) aaCACCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAAt < 1:2070616/140‑1 (MQ=255) cacCAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCa < 1:3750149/140‑1 (MQ=255) ccAGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCaaa > 1:4256060/1‑140 (MQ=255) aGGAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCTGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAAcc > 1:3344041/1‑140 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCGAACCg > 2:4916137/1‑140 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCg > 1:2803602/1‑140 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCg < 2:5585564/140‑1 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCg > 1:1061973/1‑140 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCg > 2:3679676/1‑140 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCg > 1:763813/1‑140 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCg < 1:101460/140‑1 (MQ=255) ggAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCg > 2:2823126/1‑140 (MQ=255) gAAAACGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAAAATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGa > 2:1008235/1‑140 (MQ=255) acaaCGCCCCAGTTAATGTATTTCATGTCACAAGCGACCAGAAATTGAAAAATATTGGCCGTCCGGAAAGTCATTCCTAACCCACACATGCGCCCGATTGCTACACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGAt < 2:4516346/138‑1 (MQ=255) aaaaCTCCCCAGTTAATGTATTTCATGTCACCCGCGACCACAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGAt < 2:5304122/140‑1 (MQ=255) aaaaCGCCCCGGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGAt < 2:1896197/140‑1 (MQ=255) aaaaCGCCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGAt < 1:1779031/140‑1 (MQ=255) | CTGGCACCGAAGCCCATCAGTACACCACCTAACCCGCTACGTAATGTTGTTTGTGCATCAGCTGCGCGAACGCGG‑AACTCACGGCTCGCTTTGGCTGCAATAAATGACCCCACGAAGATCCCTAACACCAGGAAAACACCCCAGTTAATGTATTTCATGTCACCCGCGACCAGAAATTGCAGAATATTGGCCGTTGGGGAAGTGATTCCTAACCCAAACATGCGTCCGGTTGCTTCACTCAGGGGCCAGGCTAAAAGCGCAATCAAACCGAT > NZ_CP025268/2088675‑2088946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |