| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,869,477 | A→C | I128S (ATC→AGC) | rpoS ← | RNA polymerase sigma factor RpoS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,869,477 | 0 | A | C | 99.7% | 1105.5 / NA | 335 | I128S (ATC→AGC) | rpoS | RNA polymerase sigma factor RpoS |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (192/142); total (192/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 335 total aligned reads displayed.
CTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGC > NZ_CP025268/2869341‑2869613 | ttACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGGCAAACTTCTCTACCGCGCGCCTCAGc > 2:926087/1‑140 (MQ=255) tACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGcc < 1:3001774/140‑1 (MQ=255) tACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGcc < 1:2859457/140‑1 (MQ=255) aTGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAg > 1:4976/1‑140 (MQ=255) aTGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAg > 1:4744686/1‑140 (MQ=255) aTGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAg > 1:4264935/1‑140 (MQ=255) aTGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAg > 1:204615/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGTTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGtt > 1:4958654/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGtt > 2:844154/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGtt > 1:3109197/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGtt > 1:213106/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGtt > 1:252144/1‑140 (MQ=255) aTCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGcc < 1:5091552/140‑1 (MQ=255) aTCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGcc < 1:1879252/140‑1 (MQ=255) cGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCct > 1:1307277/1‑140 (MQ=255) cAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCtt > 1:765889/1‑140 (MQ=255) ccGAATAGTACGGGTTTGATTCATAATCGCCCGTTCAATCGTGTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGa < 2:2201142/139‑1 (MQ=255) cGAATAGTCCGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGAt < 2:4363629/140‑1 (MQ=255) cGAATAGTACGGGTTTGGTGCAATATCGCCCGTTGAACCGGCTGGCGAAACCACCATGTTGCGTATGTTGAGAAGCGGAAACCACATTCCGGGTCAATCGTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCAAt < 2:1587164/140‑1 (MQ=255) gAATAGTACGGGTTTTGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCCCGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATa < 2:4462267/140‑1 (MQ=255) gAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATa < 2:2393901/140‑1 (MQ=255) gAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATa < 1:1594583/140‑1 (MQ=255) gAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATa < 1:388342/140‑1 (MQ=255) tAGTACGGGGTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCCGCCCCAGGTTGCCCTCTTCGATAAgg > 2:1219648/1‑140 (MQ=255) aGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGt > 2:2988172/1‑140 (MQ=255) aGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGt < 1:361623/140‑1 (MQ=255) cGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAg > 2:3203283/1‑140 (MQ=255) gTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCaa > 2:1630962/1‑140 (MQ=255) gTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCaa > 1:4934923/1‑140 (MQ=255) gTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCaa > 1:4206194/1‑140 (MQ=255) gTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCaa > 1:853979/1‑140 (MQ=255) tGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGc < 1:3525020/140‑1 (MQ=255) tGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGc > 2:1841609/1‑140 (MQ=255) gtacATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGATGCGTCTGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGAGCGTCTCAGCCCCCGATTGCCCTCTTCCATCAGGGCCAGTAACGCCa > 2:3323067/4‑140 (MQ=255) gTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCa > 2:3879146/1‑140 (MQ=255) gTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCa > 1:903800/1‑140 (MQ=255) gTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCa > 1:5445180/1‑140 (MQ=255) tAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCGACGCCAGACCa > 1:3394836/1‑140 (MQ=255) tAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCa > 1:1103851/1‑140 (MQ=255) tAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCa > 2:3995510/1‑140 (MQ=255) tAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCa > 1:2972976/1‑140 (MQ=255) aTCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACg < 1:3955597/140‑1 (MQ=255) cGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGACACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAt < 1:2935199/140‑1 (MQ=255) cGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGTGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAt < 2:1700846/140‑1 (MQ=255) cGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAt < 1:2011346/140‑1 (MQ=255) cGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAt < 1:510970/140‑1 (MQ=255) gCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAtt > 2:5024903/1‑140 (MQ=255) cccGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTg > 2:512300/1‑140 (MQ=255) cccGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTg > 2:1164942/1‑140 (MQ=255) cccGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTg > 1:6845/1‑140 (MQ=255) ttCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCAt > 1:566118/1‑140 (MQ=255) ttCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCAt > 1:3702411/1‑140 (MQ=255) aTCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAAcg > 1:4053502/1‑140 (MQ=255) aTCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAAcg < 1:4615394/140‑1 (MQ=255) tGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGc > 2:5353504/1‑140 (MQ=255) ggCGAATCCACCAGGTTGCGGATGTTGAGAAGCGGAAACCACGTTCCGTGTCAAACTTCTCTACCGCGCGGCTGAGCCCCAGGTTGCCCTCTTCGATAAGCTCCAGCCACGCCAGACCAAGATTGCCATAACGGCgggaa > 2:2150087/1‑138 (MQ=255) aTGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATCACGGCGGGCAATTTTTACCACCAGACGCAAg < 2:4249857/140‑1 (MQ=255) gTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGtt > 1:3217736/1‑140 (MQ=255) gTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGtt > 1:4152873/1‑140 (MQ=255) ttGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTa > 2:3143032/1‑140 (MQ=255) tGAGAAGCGGAAACCACGTTCCGGGTCACACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATCAGGTCCAGCCACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCACGTTAc > 1:549511/1‑140 (MQ=255) gaAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTActct > 2:43004/1‑140 (MQ=255) gaAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTActct > 2:1957018/1‑140 (MQ=255) gCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGa > 1:5351839/1‑140 (MQ=255) cGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGat > 1:2443315/1‑140 (MQ=255) gAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGatca > 2:4858452/1‑140 (MQ=255) gAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGatca > 2:4651199/1‑140 (MQ=255) gAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGatca > 1:3814537/1‑140 (MQ=255) gAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGAAAAGGTCCAGCAACCCCAGACAACGATTGCCATAACGGCGGGCAATTTTTACCACCACACGCAATGTACtctctgtca > 2:558168/1‑135 (MQ=255) aaaCCACGTTCCGGGTAAAAATTCTCTAGCGCGCGGCTGAGGCCCCGGTTGCCCTCTTCGATAAGGTCCAGCCACGCCAGACCACGATTGCCAGAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGatcat < 2:1400826/140‑1 (MQ=255) ccGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCga < 1:928830/140‑1 (MQ=255) tCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGc < 1:1630962/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACGAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 1:4394125/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 1:512300/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:2336238/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 1:2092812/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:2946495/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:3109197/140‑1 (MQ=255) ccTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACa < 1:1530008/139‑1 (MQ=255) aCTTCTCTACGGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCAAGACCACGATTGCCATAACGGCGGTCAATTTTTCCCACCAGACGCAAGTCACTCTCGCTCATCCGGCGGCGAGAGGCGACa < 2:4387331/140‑1 (MQ=255) aCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGTTCATCCTGCGGCGACAACCGACa < 2:5230747/140‑1 (MQ=255) aCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACa < 2:5558572/140‑1 (MQ=255) aCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACa < 1:4762802/140‑1 (MQ=255) aCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACa > 2:491261/1‑140 (MQ=255) ctctACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAtctc > 1:144041/1‑140 (MQ=255) tctACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTcc > 1:4660957/1‑140 (MQ=255) tctACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGACATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTcc < 2:1328354/140‑1 (MQ=255) tctACCGCGCGGCTCAGCCCCAGGGTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATCTCGGCGGGCAATGTTTACCACCAGACGCAAGTTACGCTCGATCATCCGGCGGCGAGAGGCGACATCTcc < 2:652537/140‑1 (MQ=255) aCCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACg < 1:3172785/140‑1 (MQ=255) aCCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACg < 1:989237/140‑1 (MQ=255) aCCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACg < 1:2756986/140‑1 (MQ=255) aCCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACg < 1:4014030/140‑1 (MQ=255) aCCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACg < 1:1679206/140‑1 (MQ=255) aCCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACCCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACg < 2:3446186/140‑1 (MQ=255) ccGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGc < 2:2775973/140‑1 (MQ=255) ccGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAGTGCCATAACGGCGGCCAATTTTTACCACCAGACGCGAGTTACTCTCGATCATCCGGCCGCGAGAGGCGACATCTCCACGc > 2:28702/1‑140 (MQ=255) cgcgGCTCAGCCCCAGGTTGCCCGCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAATTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGt > 1:2373331/1‑140 (MQ=255) cgcgGCTCAGCCCCAGGCTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGt > 2:2530876/1‑140 (MQ=255) cgcgGCTAAGCCCGAGGGTGCCCACTTCGCTAAGGTCCAGCAACGCCGGACTGCGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCAGCCGGCGGCGAGAGGAGACATCTCCACGCAGt > 2:355903/1‑140 (MQ=255) cgGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAAAGCCAGACCACGATTGCCATAACGGCGGGCAATTGTTACCACCAGACGCAAGTTACTCTCGATCATCAGGCGGCGAGAGGCGACACCTCCACGCAGTgc > 2:1101031/1‑140 (MQ=255) | CTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGC > NZ_CP025268/2869341‑2869613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |