| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,119,176 | T→C | T748A (ACA→GCA) | sslE ← | lipoprotein metalloprotease SslE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,119,176 | 0 | T | C | 99.5% | 1328.5 / NA | 399 | T748A (ACA→GCA) | sslE | lipoprotein metalloprotease SslE |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (211/185); minor base G (2/0); total (214/185) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 399 total aligned reads displayed.
TACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGTGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTCAGCTTCGGT > NZ_CP025268/3119040‑3119312 | aCGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCa < 2:3914182/140‑1 (MQ=255) cAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCa > 1:3622857/1‑140 (MQ=255) cAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGGTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCa > 1:3433001/1‑140 (MQ=255) cgcACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTTCTACCGACTTGTTCAGTGCCATCGACATACCTGCGGCATCCAACa > 2:815259/1‑140 (MQ=255) cgcACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACa > 2:4152881/1‑140 (MQ=255) cgcACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACa > 1:5504267/1‑140 (MQ=255) cgcACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACa > 1:4827456/1‑140 (MQ=255) cgcACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACa > 1:376230/1‑140 (MQ=255) cgcACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACa > 1:2539246/1‑140 (MQ=255) cgcACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCCGTTCGGATGCTCTTGCGGATCGTTATTTACTACAGACTTGTTCAGTTCCATCGACATACCTGCGTCATTCAACa > 2:447532/1‑140 (MQ=255) cACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGAGACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGa > 2:5156213/1‑140 (MQ=255) atatACGGCAGGATAACGTTCATAGACCCAAATGCACGTTGCGCGCTGCTGACGAACGAGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGca < 2:4244827/137‑1 (MQ=255) aTCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGca < 2:228019/140‑1 (MQ=255) tCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGcac > 2:2512492/1‑140 (MQ=255) tCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGcac > 1:2064495/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGAc > 1:4805040/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGAc > 2:270323/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGAc > 1:3819964/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGAc > 1:3195140/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGAc > 2:70817/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAAACAGAc > 2:3465614/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAAACCTGCGGCATCCAACAGACGCACAAAACCAGAc > 2:3131472/1‑140 (MQ=255) gATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCCGACGAAAGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGAc > 2:4171878/1‑140 (MQ=255) gTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCACCAGACGCACAAAACCAGACGCGctc < 1:2239522/140‑1 (MQ=255) gTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctc < 2:2062539/140‑1 (MQ=255) gTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGAGGTTCGGATACACTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGCCCTCCGGCATCCCACCGACGCACAAAACCAGACGCGctc < 1:616908/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGCCAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 1:2352036/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAACACCAGACGCGctctc < 2:1952859/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 1:3678002/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 2:3366125/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 1:1001706/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 2:2610975/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 1:1713115/140‑1 (MQ=255) tCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 1:466932/140‑1 (MQ=255) aTAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCtt > 2:1417261/1‑140 (MQ=255) tAGGCCCAAATGCCTGTTGCGCGCTGCTGACGAAAGCGATTCGGATCCCCTTGCGGATCGTTATGTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGGCGCACAAAACCAGACGCGCGCTCTTc < 2:136687/140‑1 (MQ=255) tAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTc < 1:4277795/140‑1 (MQ=255) ccAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTaa > 1:1822116/1‑140 (MQ=255) aaaTGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGa < 2:2800988/140‑1 (MQ=255) aaaTGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGa > 2:4869862/1‑140 (MQ=255) gTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCtcat < 1:5198436/140‑1 (MQ=255) gTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCtcat < 1:2973870/140‑1 (MQ=255) cgcgcTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACg < 1:3905869/140‑1 (MQ=255) ctgctgACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTCCTACCGACTTGTTCAGTGCCATCGAAAGACCTGCGGCATCCAACAGACGCACAAAACCATACGCGCTCTCTTCCTTAAGATTGCTCAACACGtttt > 2:1475788/1‑140 (MQ=255) gctgACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTcc < 1:3560516/140‑1 (MQ=255) gctgACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTcc < 1:2382313/140‑1 (MQ=255) gctgACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGAGCTCTCTTCCTTAAGATTGCTCATCACGTTTTcc < 1:4962555/140‑1 (MQ=255) ctgACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCa > 1:1456488/1‑140 (MQ=255) cGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGAt < 1:4641617/140‑1 (MQ=255) aCGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAg < 2:3271933/140‑1 (MQ=255) aCGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAg < 2:4969293/140‑1 (MQ=255) cgcgGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGc < 1:1378576/140‑1 (MQ=255) cgGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGCCGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCAc < 2:1117977/140‑1 (MQ=255) cgGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCAc < 2:1626385/140‑1 (MQ=255) cgGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCAc > 1:3384468/1‑140 (MQ=255) cGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATc < 1:1086394/140‑1 (MQ=255) cGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATc < 2:3220792/140‑1 (MQ=255) cGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATc < 1:3044615/140‑1 (MQ=255) cGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATc < 1:287179/140‑1 (MQ=255) cGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTGCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATc < 1:3925171/140‑1 (MQ=255) tACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CAcc < 2:1990484/140‑1 (MQ=255) cccTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCtt > 2:4617539/1‑140 (MQ=255) ccTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTCTCCATGATCAGCACCGATC‑CACCttt < 1:1602294/140‑1 (MQ=255) tGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGTATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGtt > 2:4672498/1‑140 (MQ=255) tGCGCAGCGTTATGTCCTACCGACTTGTTCAGCCCCAGCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGTCCTCTTCCTTAAGCTGGCCCATCACGTTTTCCACGAGAAGCACCGATC‑CACCTTTGtt < 2:1795243/140‑1 (MQ=255) gATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGa < 1:3966975/140‑1 (MQ=255) aTCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGAt < 1:4069743/140‑1 (MQ=255) ggagagttACTACCGACTTCTTCAGTGCCATCGAGAGACATGCGGGCGAGAACAGACGCACAAAACCAGACGCGCGATCTGCCGTAAGAGTGCACACCAGGTTCGCCACGAGCAGCAGCTAGC‑CACCTTTGTTCagagag > 2:953353/7‑140 (MQ=255) cGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAg > 2:1322726/1‑140 (MQ=255) tacCTACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGAt < 2:2211635/140‑1 (MQ=255) tacCGACTTGTTCAGTGCCATCGACAGACCTGGGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGAt > 1:859286/1‑140 (MQ=255) tacCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGAt < 1:2170148/140‑1 (MQ=255) tacCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGAt < 1:3264371/140‑1 (MQ=255) tacCGACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGAt < 2:5343678/140‑1 (MQ=255) cgccTTGTTCAGTGCCATCGACAGACCTGCTGCATCTAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTCAGATTGCTCATCACGTTTTCCATGCTCAGCACCGTTC‑CACCTTTGTTCATATATGCGATCAGATCgg > 2:3049663/4‑140 (MQ=255) gACTTGTTCAGTGCCATCGACAGACCTGCGGCCTACAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGt < 1:5572731/140‑1 (MQ=255) gACTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGt < 1:733085/140‑1 (MQ=255) aCTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTc < 2:29200/140‑1 (MQ=255) aCTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTCGTTCAGATAGGCGATCAGATCGGTc > 2:3561809/1‑140 (MQ=255) aCTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCGTTGTTCAGATAGGCGATCAGATCGGTc < 2:4072531/140‑1 (MQ=255) aCTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCCTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTc < 2:4827456/140‑1 (MQ=255) aCTTGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCCCTCTTCCTTAAGATTGCTCATCGCGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTc > 1:1894444/1‑140 (MQ=255) ttGTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACATTTGTTCAGATAGGCGATCAGATCGGTcac > 2:4741496/1‑140 (MQ=255) gTTCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACAt < 1:4200543/140‑1 (MQ=255) ttCAGTGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTGTTCCATGATCAGCACCGACC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATc > 1:4987854/1‑140 (MQ=255) ttCAGTGCCATCGACAGACCTGCGGCAACCAACAGACGCACAAAACAAGACGCGCTCTCTTCCTTAAGATTGCGCGCCCCG‑TTTCCTTAATCAGCACCGATCACGCCTGT‑TTCAGCTAGGCGATCAGTACGGTCACAtgc > 2:1063902/1‑138 (MQ=255) tGCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGctctc < 1:1151748/54‑1 (MQ=255) gCCATCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCctgctg < 1:4495826/140‑1 (MQ=255) aTCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGt < 1:2601241/140‑1 (MQ=255) aTCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGt < 1:815259/140‑1 (MQ=255) tCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTc > 2:3683711/1‑140 (MQ=255) tCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTc > 1:94016/1‑140 (MQ=255) tCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTc > 1:988660/1‑140 (MQ=255) tCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTc > 1:1251900/1‑140 (MQ=255) tCGACAGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTc > 2:1181116/1‑140 (MQ=255) tCGAAAGACCTGCGCAATCCAACAGACGCACAAAACCAGACGCGCTCACTTCCTTAAGATAGCATATCACGATTTCCATGAGCAGCACCGATC‑CACCTTTGTTCAGATATGCTATAAGATCAGTCACATCCTGCTGAGTc > 2:728767/1‑140 (MQ=255) aGACCTGCGGCATCCAACAGACGCACAAAACCATACGCGCTATCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCACCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTAACATCCTGATGAGTAAGCtt > 2:442649/1‑140 (MQ=255) aGACCTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTCAGCtt > 1:4881401/1‑140 (MQ=255) aCCTGCGGCATCCAACAGACGCACAAAACCAGACTCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTCAGCTTCg > 1:274932/1‑140 (MQ=255) cTGCGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTCAGCTTCGGt < 2:554111/140‑1 (MQ=255) | TACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTGCCATCGACAGACCTGTGGCATCCAACAGACGCACAAAACCAGACGCGCTCTCTTCCTTAAGATTGCTCATCACGTTTTCCATGATCAGCACCGATC‑CACCTTTGTTCAGATAGGCGATCAGATCGGTCACATCCTGCTGAGTCAGCTTCGGT > NZ_CP025268/3119040‑3119312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |