| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,142,598 | C→T | G9S (GGC→AGC) | hypA ← | hydrogenase maturation nickel metallochaperone HypA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,142,598 | 0 | C | T | 99.6% | 942.0 / NA | 255 | G9S (GGC→AGC) | hypA | hydrogenase maturation nickel metallochaperone HypA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (132/121); minor base G (1/0); total (134/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 257 total aligned reads displayed.
GTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCCCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCGT > NZ_CP025268/3142459‑3142732 | gTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCACTGTCCAGCCACACGGCGGCGCCGCGCCTAACATCGTGCTCCCCCGCCTGCCGTCGGCTAACTTCAACGGCGcc > 2:2630774/1‑140 (MQ=255) tGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCa > 2:1759976/1‑140 (MQ=255) aaTTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACa > 1:634053/1‑140 (MQ=255) aaTTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCAACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACTGCGCTCTGGCAAAGAGACa > 1:726551/1‑140 (MQ=255) tttCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAAc > 1:5536418/1‑140 (MQ=255) cAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCa > 2:5037317/1‑140 (MQ=255) aaCTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGc < 2:4594799/140‑1 (MQ=255) ggacgcCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGcc < 2:1023085/140‑1 (MQ=255) gcgcTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTcc < 1:3934253/140‑1 (MQ=255) tcctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCGGCGAc > 2:4914698/1‑140 (MQ=255) aaCGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAAc > 1:2172919/1‑140 (MQ=255) aaCGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTGGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAAc > 1:1827879/1‑140 (MQ=255) cAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAAcagca < 1:317259/140‑1 (MQ=255) aGGAGATCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCGCCTCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCG‑TGTTCTCGACTCCTGCGACAAAAcagcag > 2:2801978/1‑140 (MQ=255) aGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAAcagcag > 1:5506873/1‑140 (MQ=255) aGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAAcagcag > 1:4578001/1‑140 (MQ=255) aGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAAcagcag > 1:4255305/1‑140 (MQ=255) aGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAAcagcag > 1:758365/1‑140 (MQ=255) gagaGCGCGCCAATTTCCAGCCACACGTCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAggg > 2:71924/1‑140 (MQ=255) gagaGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAggg > 1:3795154/1‑140 (MQ=255) gagaGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAggg > 1:2523022/1‑140 (MQ=255) gagaGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAggg > 2:3768718/1‑140 (MQ=255) gagaGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGGGCTGCTCCGCCTGGCGGGGGATAGTTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTGTCGCCACTGCTGCGACCAAACGGCAggg > 2:4276655/1‑140 (MQ=255) agCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGgcgc > 1:1993690/1‑140 (MQ=255) cgcggCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGCCCAAACAGCAGGGCCCGa > 2:5171651/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:4161377/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:976270/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 2:5581882/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:4954710/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:4862475/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:4677237/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:2377773/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 2:1229749/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:4401555/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 1:1015520/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa < 2:2714239/140‑1 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa > 2:4989282/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa < 2:790112/140‑1 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCGCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACGAAACAGCAGGGCGCGa > 1:3117486/1‑140 (MQ=255) cgcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTAGGATAATTTCAACGACGCTTTGGCAAAGAGACAACTCATGCA‑TTTTCGCCGCTCCTGCGACCAAAAAGCAGGGCGCGa > 2:2182295/1‑140 (MQ=255) gcgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGAc < 2:484112/140‑1 (MQ=255) cgcCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACg > 2:6629/1‑140 (MQ=255) cgcCAATTTCCAGCCACACGGCGATGGCGCACTTAACATCGTGCTGCTCCGTCTGCCGTTGGATAATTTCAAGGGCGCTCTGGCAAAGAGTCACCTCGTGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACg > 1:3347510/1‑140 (MQ=255) ccAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGcc < 2:3123662/140‑1 (MQ=255) ccAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTGCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGcc < 1:5103759/140‑1 (MQ=255) cAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGccc > 1:2519978/1‑140 (MQ=255) cAATATCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCTCCTGCCGTTGGATAATTTCAACGGCGCTCGGGCTAAGAGGCGACTCATGCA‑TGTTCGCCACTTTTGGTACCAATGAGCAGGTCGCGAGGccc > 2:4392091/1‑140 (MQ=255) aaTTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCt < 1:1126114/140‑1 (MQ=255) aaTTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCt < 2:5506873/140‑1 (MQ=255) aaTTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCt < 1:20978/140‑1 (MQ=255) aaTTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCt < 2:5326988/140‑1 (MQ=255) aaTTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCt < 1:2783/140‑1 (MQ=255) ttCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCg < 1:2461982/140‑1 (MQ=255) tCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCgt > 1:1452007/1‑140 (MQ=255) tCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCgt < 2:2107507/140‑1 (MQ=255) ccAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCgtg < 1:4141212/140‑1 (MQ=255) aGCCACACGGCGGTGACGCGCTTAACATCGTCCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGtgtg > 2:4350427/1‑140 (MQ=255) gCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTgg < 2:3953170/140‑1 (MQ=255) gCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTgg < 2:3834821/140‑1 (MQ=255) ccACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGt < 1:3176427/140‑1 (MQ=255) cggTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCgg > 2:5221832/1‑140 (MQ=255) cgcgCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGt > 1:5290350/1‑140 (MQ=255) cgcgCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGt > 2:2878546/1‑140 (MQ=255) cgcTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGa > 1:3288980/1‑140 (MQ=255) gcTTAACACCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCCCTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGAc < 2:3688231/140‑1 (MQ=255) cTTAACATCGTGCTGCTCCGCCTGCCGTTGGCTAATTTCAACGGCGCTCTGGCACAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACTAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACt > 2:4489238/1‑140 (MQ=255) cTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACt > 2:4697573/1‑140 (MQ=255) cTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACt > 2:5404535/1‑140 (MQ=255) cTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATGTCAACGGCGCTCTGGGAAAGGGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCGGCGTGTGGTACATCCGGATTCGTGACt > 2:2217408/1‑140 (MQ=255) aaCATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGc > 1:845175/1‑140 (MQ=255) tCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCg > 1:2700502/1‑140 (MQ=255) tCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCg < 2:3798886/140‑1 (MQ=255) tCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCg < 2:1540990/140‑1 (MQ=255) gTGCTGCTGCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGaa < 1:1752657/140‑1 (MQ=255) gTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGa > 2:1606330/1‑140 (MQ=255) gTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGaa > 2:894989/1‑140 (MQ=255) ctgctgcTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTGCGCCACTCCTGCGACCAACCAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGaa < 2:254003/139‑1 (MQ=255) tgctCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCC‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGa > 2:2398099/1‑140 (MQ=255) ctCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATc > 1:3049111/1‑140 (MQ=255) ctCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTAGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTAAATCCGGATTCGTGACTGGCAGCGAAAGGATc > 1:4097945/1‑140 (MQ=255) ctCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTAGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATc > 2:3397829/1‑140 (MQ=255) ccGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCAt < 1:600844/140‑1 (MQ=255) ccTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCg > 1:1613559/1‑140 (MQ=255) ccTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCg > 1:3454671/1‑140 (MQ=255) catGCCGTTGGATAATTTCAACGGCGCACTGGCAACGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCg > 2:2655381/3‑140 (MQ=255) ccGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTgcg < 1:3941527/140‑1 (MQ=255) cGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTgcgc > 1:447876/1‑140 (MQ=255) cGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTgcgc < 1:2230308/140‑1 (MQ=255) cGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTgcgc < 1:2926609/140‑1 (MQ=255) ggATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTc < 2:2735008/140‑1 (MQ=255) gATAATTTCAGCGGCGCTCTGGCAAAGAGACACCTCATGCA‑GTTTCGCCCCGCCTGCGACCAAACAGCAGGGCGCGACGCCCTGGGTGTGGTACCCCCGGAGTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCa < 1:1335729/140‑1 (MQ=255) gATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCa < 1:3602183/140‑1 (MQ=255) gATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCa < 2:281551/140‑1 (MQ=255) aTAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCg > 1:281903/1‑116 (MQ=255) tgaaCGGCGGTGTGGGAAAGAGACAACTCATGCA‑TTTTCGCCTCTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCCGCGAAAGGATCATTCGTGCGCAGTCATCCGTct < 2:1517582/138‑2 (MQ=255) tCAACGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAACCAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCa < 2:461729/140‑1 (MQ=255) cGGCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCg > 1:2275169/1‑140 (MQ=255) ggCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGTCGCGACGCCCTGCGCGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCGt < 1:3087589/140‑1 (MQ=255) ggCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCGt < 2:2003279/140‑1 (MQ=255) ggCGCTCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCGt < 2:1332364/140‑1 (MQ=255) | GTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCCCTGGCAAAGAGACAACTCATGCA‑TTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGACGCCCTGCGTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCGT > NZ_CP025268/3142459‑3142732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |