| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,479,278 | T→C | *67* (TAA→TAG) | yheV ← | YheV family putative zinc ribbon protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,479,278 | 0 | T | C | 99.7% | 949.2 / NA | 289 | *67* (TAA→TAG) | yheV | YheV family putative zinc ribbon protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (157/131); total (157/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
CTGATAGGCCAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGTTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTATTTTCGCGCCACATCGCCATT > NZ_CP025268/3479142‑3479416 | tGATAGGCCAGGCTGACCACCAGGGCTTGTGCTACTTTCATGATATCTCCTGAGCATGGGCAGAATAGTGGCGCAGATTGTAGCGGAATGCTGCAGCCGTGGACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGt > 2:281579/1‑140 (MQ=255) aTAGGCCAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTcc > 2:4951910/1‑140 (MQ=255) aTAGGCCAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTcc > 2:4883003/1‑140 (MQ=255) aTAGGCCAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAA‑AGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCg > 1:2836263/1‑140 (MQ=255) gggCCAGGCTGACCACCAGGTCTTTTGTTACTTTCATAATATCTCCTGACCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCgg < 2:2270536/139‑1 (MQ=255) aGGCCAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCgg < 2:4593805/140‑1 (MQ=255) aGGCCAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAACAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCgg < 1:4619748/140‑1 (MQ=255) ccAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATg > 2:2469872/1‑140 (MQ=255) ccAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATg > 2:2149897/1‑140 (MQ=255) ccAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATg > 1:4132120/1‑140 (MQ=255) ggCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGaaa > 1:3215223/1‑140 (MQ=255) ggCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGaaa > 2:93529/1‑140 (MQ=255) gCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGaaaa > 1:2175873/1‑140 (MQ=255) gACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATc > 1:62473/1‑140 (MQ=255) accaccAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATcc > 2:558124/1‑140 (MQ=255) accaccAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATcc > 1:669473/1‑140 (MQ=255) ccaccaGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGGTGAAAAATccc > 1:1178236/1‑140 (MQ=255) caccaGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCg < 2:3341215/140‑1 (MQ=255) caccaGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCg < 2:3595691/140‑1 (MQ=255) caGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATc < 1:3065827/140‑1 (MQ=255) ggTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCAc < 2:3245065/140‑1 (MQ=255) cTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTg > 2:454561/1‑140 (MQ=255) ttttGCTACTTTCATGATATCTCCTGAGCATGGGAACACTCGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGc < 2:3283599/140‑1 (MQ=255) tttGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGCATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTCGTCCGGATGAAAAATCCCGATCACTTGCt > 2:1847498/1‑140 (MQ=255) tttGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCt < 1:5089704/140‑1 (MQ=255) gCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCAt > 2:5451608/1‑140 (MQ=255) cATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGa < 1:1680316/140‑1 (MQ=255) gATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACg < 1:653527/140‑1 (MQ=255) cTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTTATcgcg > 2:1995938/1‑140 (MQ=255) gAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCggg > 2:1789287/1‑140 (MQ=255) gAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCggg > 2:5307934/1‑140 (MQ=255) aGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGc > 2:3699260/1‑140 (MQ=255) tGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGcttct < 1:5539603/140‑1 (MQ=255) gggAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGcttctt > 1:3688514/1‑140 (MQ=255) gggAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGcttctt > 1:1510186/1‑140 (MQ=255) gggAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGcttctt > 1:2075668/1‑140 (MQ=255) aaTAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTg < 1:1402761/140‑1 (MQ=255) aaTAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTg < 1:2198043/140‑1 (MQ=255) tGGCGCATATTGTAGCTGCATTCCCCCGCCGTGTACTCCCTACTTTAGAAAATCCC‑TGCCCATATCGCTAGTCCGGATGCCGCCTCCCGATCGCTTGCTCATCTTTGCGAACGTGATCGCGTGCTTCTTTGTCTGCTtct < 2:4758054/140‑1 (MQ=255) tGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTTTCTGCTtct > 2:4515661/1‑140 (MQ=255) tGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTtct < 1:2482398/140‑1 (MQ=255) tGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTtct > 1:89137/1‑140 (MQ=255) tGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTtct > 1:1745951/1‑140 (MQ=255) tGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTtct < 1:3270940/140‑1 (MQ=255) tGGCGCAGATTGTAGCGGAATTCGGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTtct < 2:2367712/140‑1 (MQ=255) gcgcAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCg > 2:41500/1‑140 (MQ=255) gcgcAGATTGTAGCGGAAGTCTACAGCCGTGTCCTCACTAGCTTAAATAAACTC‑GGCTGCTATCGCGAGTCCCGATGAAAAATCCAGATCACTTGCTCAACTGTGCGAACGTTATCGGAGACTTCTTTGACTTGTtctag > 2:4413616/1‑138 (MQ=255) ccggcgATTGTAGTGTAATTCTTCAGCCGTCTACTCCCTTGCTTAAAAAAACTC‑GGTGCATATCGCTAGTCCGGATGAAAACTCCCGAGCACTTGCTCATATTTCCGACCGTGATCGCGGGCTTCTTTGTCGGCTTCTCg < 2:4310232/135‑1 (MQ=255) cAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCAt > 2:2006588/1‑140 (MQ=255) gATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCt < 1:2927548/140‑1 (MQ=255) gATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCt < 2:4607436/140‑1 (MQ=255) tAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGt > 1:1713683/1‑140 (MQ=255) aGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTc < 1:2422242/140‑1 (MQ=255) gCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAGCTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 2:188241/140‑1 (MQ=255) gCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 2:594367/140‑1 (MQ=255) gCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 1:253531/140‑1 (MQ=255) gCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 2:5111209/140‑1 (MQ=255) gCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 2:106210/140‑1 (MQ=255) gCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 1:3519949/140‑1 (MQ=255) gCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 1:4505413/140‑1 (MQ=255) gCGGAATTCTCAAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTcc < 2:3457507/140‑1 (MQ=255) cGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCg < 1:4956677/140‑1 (MQ=255) ggAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGTATCTGATGTCCGc < 2:1825095/140‑1 (MQ=255) aaTTCTGCAGCCGTATACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGAATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCAc > 2:1224855/1‑140 (MQ=255) aTTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACt < 2:5544407/140‑1 (MQ=255) ttCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTCGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACtt > 2:3805546/1‑140 (MQ=255) ttCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACtt > 1:1103700/1‑140 (MQ=255) tCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTa < 1:3483436/140‑1 (MQ=255) tCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTa < 1:5206675/140‑1 (MQ=255) cTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTTGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGATTCGCGCATCTGATGTCCGCACTTaa > 2:4401473/1‑140 (MQ=255) cTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCTGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTaa < 1:3985188/140‑1 (MQ=255) cTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTaa < 2:3091111/140‑1 (MQ=255) cAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAacac > 2:1653741/1‑140 (MQ=255) ggacGTGTACTCACTATGAT‑AACAAACTCAGGCGCATCTCGCTTGTCCGGATTAAGAATCACGCGCAATTGCCAATCTTTGTGAACGTGCTCGCGCGTTTCTTTGTCTGCTTCTCGCATCCGATTTCCGCACTCAAcaca < 2:1476500/137‑1 (MQ=255) aGCCGTGTACTCACTAGCTTAAACCAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAAcaca < 2:3172226/140‑1 (MQ=255) aGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAAcaca < 1:5368431/140‑1 (MQ=255) aGCCGCGTACTCACTAGCTTAAAAAACCTC‑GGCGCATATCGCTAGTCCGGACGAAAAATCCCGATCACTTGCCCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTCCTTCCCGCATCTGATGTCCGCACTCAacacc < 2:2991426/140‑2 (MQ=255) gCCGTGTACTCACTAGGTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCTCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACAt < 1:3096423/140‑1 (MQ=255) gCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACAt < 1:2287978/140‑1 (MQ=255) gtgtACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGCCCGCTTCTCGCAGCTGATGTCCGCACTCAACACATTca > 1:4200186/1‑140 (MQ=255) tgtACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTcaa > 1:3460233/1‑140 (MQ=255) tACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATacaaca > 2:4912148/1‑140 (MQ=255) tACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTcaaca > 1:1597080/1‑140 (MQ=255) cACTAGCTGAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatat < 1:4450480/140‑1 (MQ=255) aCTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatatc > 2:2976148/1‑140 (MQ=255) aCTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatatc > 1:1557477/1‑140 (MQ=255) aCTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatatc > 1:2592233/1‑140 (MQ=255) aCTAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGAGGTCCGCACTTAACACATTCAAcaatacc > 1:1828335/1‑138 (MQ=255) tAGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatatcaa > 1:1933204/1‑140 (MQ=255) aGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatatccat > 2:2592182/1‑140 (MQ=255) aGCTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatatcaat > 2:2443811/1‑140 (MQ=255) cTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAAcaatatcaatat > 2:3733750/1‑140 (MQ=255) cTTAAAAAAACTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGACCGCACTTAACACATTCAAcaatatcaatat > 2:5246810/1‑140 (MQ=255) aaaaCTC‑GGCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTAtttt < 2:3374278/140‑1 (MQ=255) ggCGCATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTATTTTCGCGCca < 1:4068399/140‑1 (MQ=255) gcATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTATTTTCGCGCCACAt < 1:213729/140‑1 (MQ=255) gcATATCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTATTTTCGCGCCACAt < 2:3912617/140‑1 (MQ=255) atatCGCTAGTCCGGATGAAAAATCCCGATCCCTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTATTTTCGCGCCACATCg < 1:3785974/140‑1 (MQ=255) atatCGCTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTATTTTCGCGCCACAGCg < 1:1375095/140‑1 (MQ=255) gTTCGTCCAGATGAAAAATCGCGATCACTTGCTCATCCTTGAGAACGTGATCGCGCGCTTATTTGTCTGGTTCTCGCATCTGATGTCCGCACTTAGCACATTCAACAATATCACTATTATTTTCGCTCTACATCGCCAtt < 2:1171408/140‑1 (MQ=255) | CTGATAGGCCAGGCTGACCACCAGGTCTTTTGCTACTTTCATGATATCTCCTGAGCATGGGAAGAATAGTGGCGCAGATTGTAGCGGAATTCTGCAGCCGTGTACTCACTAGCTTAAAAAAACTC‑GGCGCATATCGTTAGTCCGGATGAAAAATCCCGATCACTTGCTCATCTTTGCGAACGTGATCGCGGGCTTCTTTGTCTGCTTCTCGCATCTGATGTCCGCACTTAACACATTCAACAATATCAATATTATTTTCGCGCCACATCGCCATT > NZ_CP025268/3479142‑3479416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |