BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,943,931	A→G	noncoding (205/1542 nt)	CXP41_RS20515 →	16S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,943,931	0	A	G	95.1%	772.8 / 25.6	371	noncoding (205/1542 nt)	CXP41_RS20515	16S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base A (7/11); new base G (181/169); total (190/181)
Fisher's exact test for biased strand distribution p-value = 3.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 374 total aligned reads displayed.

TAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACT  >  NZ_CP025268/3943796‑3944066

tAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCtt                                                                                                                                     >  2:2245783/1‑140 (MQ=11)

  aCAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCg                                                                                                                                   >  1:4360941/1‑140 (MQ=17)

        aaCAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCctc                                                                                                                             <  2:4433024/140‑1 (MQ=18)

        aaCAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCctc                                                                                                                             <  1:5270681/140‑1 (MQ=18)

        aaCAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCctc                                                                                                                             >  2:1620559/1‑140 (MQ=18)

          cAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCtt                                                                                                                           >  1:2780572/1‑140 (MQ=18)

          cAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCtt                                                                                                                           <  2:3623625/140‑1 (MQ=18)

              ttGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCa                                                                                                                       <  1:1123149/140‑1 (MQ=18)

               tGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCAt                                                                                                                      <  1:4586929/140‑1 (MQ=18)

               tGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCAt                                                                                                                      <  1:2387938/140‑1 (MQ=18)

               tGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCAt                                                                                                                      <  1:4611436/140‑1 (MQ=18)

                gCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATc                                                                                                                     >  1:4173168/1‑140 (MQ=18)

                  tGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAg                                                                                                                   <  2:1132455/140‑1 (MQ=18)

                  tGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAg                                                                                                                   <  2:107371/140‑1 (MQ=21)

                    tttCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGAt                                                                                                                 <  1:3183103/140‑1 (MQ=37)

                     ttCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGAtg                                                                                                                >  2:3272239/1‑140 (MQ=25)

                         cTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAATCTGCCTGATGGAGGGGGATAACTGCTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGcc                                                                                                            <  2:1561965/140‑1 (MQ=255)

                             cGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGa                                                                                                        <  1:5332237/140‑1 (MQ=18)

                             cGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGa                                                                                                        <  2:1903015/140‑1 (MQ=17)

                             cGAGCGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGa                                                                                                        <  2:3130643/140‑1 (MQ=18)

                                 tGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATggg                                                                                                    >  1:3743397/1‑140 (MQ=18)

                                 tGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATggg                                                                                                    >  1:3579341/1‑140 (MQ=18)

                                   gCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAt                                                                                                  <  2:4507595/140‑1 (MQ=18)

                                    cGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAtt                                                                                                 <  2:5087474/140‑1 (MQ=33)

                                      gACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAg                                                                                               <  1:4993173/140‑1 (MQ=18)

                                          ggTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCtag                                                                                           >  1:1791188/1‑140 (MQ=17)

                                           gTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCtagt                                                                                          <  1:669327/140‑1 (MQ=18)

                                           gTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCtagt                                                                                          <  2:3000910/140‑1 (MQ=18)

                                            tGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCtagta                                                                                         <  1:2175594/140‑1 (MQ=18)

                                              aGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAgg                                                                                       <  1:2118942/140‑1 (MQ=18)

                                              aGTAATGTCTGGGAAACGGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAgg                                                                                       <  2:3571612/140‑1 (MQ=17)

                                                     tCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTa                                                                                >  2:5233746/1‑140 (MQ=18)

                                                     tCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTa                                                                                >  1:3666090/1‑140 (MQ=18)

                                                     gcTGGGAAACTGCCTGATGGAGGGGGATAAGTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTATAGCCAACAGATGTGCCCAGATGGGATGAGCTAGTAGGTGGGGTa                                                                                >  2:1367054/2‑140 (MQ=11)

                                                         ggAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACgg                                                                            <  2:2374835/140‑1 (MQ=18)

                                                           aaaCTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCt                                                                          <  1:3329505/140‑1 (MQ=18)

                                                           aaaCTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCt                                                                          <  2:5320591/140‑1 (MQ=18)

                                                               tGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCAcc                                                                      >  1:4400126/1‑140 (MQ=17)

                                                                      tGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGcga                                                               <  1:3410796/140‑1 (MQ=17)

                                                                       ggAGGGGGATAACTACTGGAAACTGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTGCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGcgac                                                              <  2:3797823/140‑1 (MQ=12)

                                                                       ggAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGcgac                                                              <  2:2547271/140‑1 (MQ=18)

                                                                         aGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGACATCAGATGTCCCCAGATCGGATTCGACGCTCGGTGGGGTACAGCCTGACCCAAGcgacga                                                            >  2:3990077/1‑140 (MQ=11)

                                                                           ggggATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATc                                                          >  1:1719021/1‑140 (MQ=18)

                                                                           ggggATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATc                                                          >  1:1171911/1‑140 (MQ=18)

                                                                               aTAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGAGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTa                                                      >  1:4085103/1‑140 (MQ=18)

                                                                                tAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAg                                                     >  1:3022358/1‑140 (MQ=18)

                                                                                  actactGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCt                                                   >  2:2668176/1‑140 (MQ=18)

                                                                                     actGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGt                                                >  1:2444817/1‑140 (MQ=17)

                                                                                     actGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGt                                                >  1:2017123/1‑140 (MQ=18)

                                                                                       tGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCt                                              >  1:3825381/1‑140 (MQ=18)

                                                                                        ggAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTg                                             >  1:471438/1‑140 (MQ=18)

                                                                                         gAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTga                                            >  2:3065848/1‑140 (MQ=18)

                                                                                           aaCGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTgaga                                          >  1:5398858/1‑140 (MQ=17)

                                                                                           aaCGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTgaga                                          <  1:2968316/140‑1 (MQ=18)

                                                                                              ggTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGa                                       >  2:5345168/1‑140 (MQ=18)

                                                                                              ggTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGa                                       >  1:99963/1‑140 (MQ=18)

                                                                                              ggTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGa                                       >  1:1960528/1‑140 (MQ=18)

                                                                                              ggTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATACCTAGCTGGTCTGAGAGGa                                       >  1:1847137/1‑140 (MQ=16)

                                                                                              ggTAGATAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGa                                       <  2:2021436/140‑1 (MQ=18)

                                                                                                      aTACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGc                               <  2:210458/140‑1 (MQ=18)

                                                                                                        aCCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGGGACGATCCCTAGCTGGTGTGAGAGGATGACCAGCca                             >  2:704363/1‑140 (MQ=12)

                                                                                                          cGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCcaca                           <  2:4765841/140‑1 (MQ=17)

                                                                                                            cATAACGTCGCAAGACCAAAGGGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGCTTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  2:911705/1‑140 (MQ=255)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGTCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGGAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGATCGGCCACACt                         >  2:4093705/1‑140 (MQ=255)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTCGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:611691/1‑140 (MQ=16)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:4260765/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:569330/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:818132/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:1278215/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  2:4702233/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:147358/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:2234142/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  2:3466355/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:2649174/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:2869830/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:3242684/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:3985399/1‑140 (MQ=18)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGAGGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:556024/1‑140 (MQ=16)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGAGGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                         >  1:2907934/1‑140 (MQ=17)

                                                                                                            cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGACCTCGTGGCATCAGATGTGCCCAGATGGGATTAGCTTGTAGGTGTGGTAACGGCTCACCTCGGCGACGATCCCTAGCTGGACAGAGAGCGTGACCAGCCACACt                         >  2:846151/1‑140 (MQ=11)

                                                                                                              tAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTgg                       >  1:4537568/1‑140 (MQ=18)

                                                                                                              tAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTgg                       <  2:5008224/140‑1 (MQ=18)

                                                                                                                 cGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAAc                    >  2:2810640/1‑140 (MQ=18)

                                                                                                                 cGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGGAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAAc                    >  2:2935203/1‑140 (MQ=16)

                                                                                                                      cAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTgaga               >  1:1016506/1‑140 (MQ=18)

                                                                                                                      cAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTgaga               >  2:1696893/1‑140 (MQ=18)

                                                                                                                      cAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTgaga               >  1:1315523/1‑140 (MQ=18)

                                                                                                                       aaGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGac              <  1:1383477/140‑1 (MQ=18)

                                                                                                                       aaGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGac              <  1:4878214/140‑1 (MQ=33)

                                                                                                                        aggccAAAGAGGGGGGCCTTCGGGCCCATTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca             <  2:742992/137‑1 (MQ=255)

                                                                                                                        aGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca             <  2:1740450/140‑1 (MQ=18)

                                                                                                                        aGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca             <  1:5095291/140‑1 (MQ=17)

                                                                                                                        aGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCAGCAGATGTGCCCAGAGGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca             <  2:4379041/140‑1 (MQ=255)

                                                                                                                            cAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGt         >  1:3553284/1‑140 (MQ=18)

                                                                                                                            cAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGt         >  1:3469488/1‑140 (MQ=18)

                                                                                                                            cAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGt         >  1:234871/1‑140 (MQ=18)

                                                                                                                                gagGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGTGACACGGTCCAg     <  2:5524982/140‑1 (MQ=17)

                                                                                                                                gagGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAg     <  1:5471428/140‑1 (MQ=17)

                                                                                                                                 agGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGa    <  2:147115/140‑1 (MQ=18)

                                                                                                                                   ggggGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACt  >  1:1598602/1‑140 (MQ=18)

TAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACT  >  NZ_CP025268/3943796‑3944066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`