| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,771,469 | (C)8→7 | intergenic (+91/‑265) | rnlB → / → yfjP | type II toxin‑antitoxin system antitoxin RnlB/GTPase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,771,462 | 0 | C | . | 94.6% | 563.4 / 18.2 | 130 | intergenic (+84/‑272) | rnlB/yfjP | type II toxin‑antitoxin system antitoxin RnlB/GTPase family protein |
| Reads supporting (aligned to +/- strand): ref base C (1/6); new base . (24/99); total (25/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 154 total aligned reads displayed.
AGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGT > NZ_CP025268/2771324‑2771601 | aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 1:223142/140‑1 (MQ=255)aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 1:223603/140‑1 (MQ=255)aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 2:1722898/140‑1 (MQ=255) gCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 1:4139487/140‑1 (MQ=255) gCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 1:4952356/140‑1 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAActtc > 2:21209/1‑137 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcccc < 1:4844612/140‑1 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcccc < 2:3216786/140‑1 (MQ=255) tctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCGTTAAccatat > 2:2878319/1‑136 (MQ=255) tctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcgccac > 2:3520749/1‑138 (MQ=255) tctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcacaaa > 2:3310915/1‑135 (MQ=255) ctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTTTCCAATGTGATCAAATAGCATTTAccgatct > 1:2546959/1‑135 (MQ=255) ctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccccc < 1:4143068/140‑1 (MQ=255) tgattggTCTCCCGATGATGTAAGCCAAGTCCTCTCAATGGATTCTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTATTGGCATCATATTACCCTGTCCAATATGATCAAATAGCATTAcccccccct < 2:4442717/134‑2 (MQ=255) tGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcctcctct > 2:3992114/1‑137 (MQ=255) tttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccccctcac < 1:963061/140‑5 (MQ=255) ttGTCTTCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:4778404/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAACCTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:873700/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:300491/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:723270/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:3582824/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:1090259/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:2087271/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:1909211/140‑1 (MQ=255) ttGTCTCCCGATCATGTATGCCAAGTACTGTCAATGGATTTTTGAAGCTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTGTGGCATGATATTAACTTGTACAATATGATCAAATAGCATTAA‑CCCCTCCTcaca < 2:1924227/140‑1 (MQ=255) ctctcCCGATTATGTACGCCAAGTCCTGTCAATGGCTTTTTGAAACTCTTCTTTCTAAACTAACCAGTATACAATTCGCCCTTTTGGCATGCTATTAACTTGACCAATATGATCAAATAGCATTAACCCCCCCC‑CACAAc < 2:5024891/139‑1 (MQ=255) ctcCCGCTTGTGTACGCCAGGTCCTGTCACTCGATTTTTGATACTCTTCTTTCTAAACGAACCAGTATAGAATTCCCCCTTTTGGCATGCTATTAACCTGTCCCATATGATCGAATAGCATTTA‑CCCGCCCTCACAACGt < 2:846229/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 1:4625495/140‑1 (MQ=255) tcCCGATGATGTACGCCACGTACTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGCATAGAATTCGCCCCTTTCGCATGATATTAACTCGTCCAATATGATCAAATAGCATT‑ACCCCCCCCTCACAACGTc < 2:653579/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:4351148/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:3012813/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:3316236/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATAGTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:3773873/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAAATCTACTGTCTAAACGAACCAGTATCGAATTCGCCCTTTTGGCATGTTATTAACTTGTCCAATATGACCAAGTAACATTAA‑CCCCCCCTCACAACGTc < 1:3050598/140‑1 (MQ=255) tcCCGATGATGTACACCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTACACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:4350917/140‑1 (MQ=255) cccGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑ACACCTCTCACAACGTct > 1:2656288/1‑139 (MQ=255) atgatgTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCa < 2:2621202/140‑1 (MQ=255) gatgTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATa < 2:2470865/140‑1 (MQ=255) cGCCAATTCCTGTCGATGGATTTTTGAACCTCTTCTTTCTAAACGAACCACTATAGGATTCGCCCTGTTGGCATGATATCAACTTGTGCAATACGCTCAAATAGCATTAA‑CCCCCCCGCCCGACGTCCTGCATAGGGAac < 2:5056338/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:4072620/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:772366/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:3121560/140‑1 (MQ=255) aaGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑t < 1:728514/140‑1 (MQ=255) aGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑tt < 2:1948635/140‑1 (MQ=255) tCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑tttt < 1:5017708/140‑1 (MQ=255) tCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑tttt < 1:1588127/140‑1 (MQ=255) cTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGGCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTcc < 1:591724/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCACATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 2:4509074/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 1:2304822/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 2:360306/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 1:2874765/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 1:3348296/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 1:670857/140‑1 (MQ=255) ggTCAATGGATTTTTGAAACTCTGCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 2:4655252/139‑1 (MQ=255) gTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTcccc < 1:4011455/140‑1 (MQ=255) cAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTAGAGAATTCGCCCTTTTGACATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑GTGACTCTAACAACTACCTTCATAAGGAACAAG‑TTTTcgtccg > 2:3775675/1‑135 (MQ=255) ggATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCa < 2:3263051/140‑1 (MQ=255) aTTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCAcc < 2:1648678/140‑1 (MQ=255) aTTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑ACCCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCAcc < 2:4268896/140‑1 (MQ=255) aTTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACCTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCAcc < 2:4268143/140‑1 (MQ=255) tttttGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCAccc < 1:4307648/140‑1 (MQ=255) gAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGAc < 1:1199606/140‑1 (MQ=255) gAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGAc < 1:2307642/140‑1 (MQ=255) ctttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑‑TTTCCCCTGTGCACCCACGACTAAATTTccc < 2:779318/140‑1 (MQ=255) tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTccc < 2:3092660/140‑1 (MQ=255) tttctAAACGAACCAGTATAGAACTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACCACGTCCTGCATAGGGAACACC‑TTTTCCCCTGTGCACCCACGACTAAATTTccc < 2:1303168/140‑1 (MQ=255) tttatAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTccc < 1:3901453/140‑1 (MQ=255) ttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTcccc < 1:4407572/140‑1 (MQ=255) ttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTCTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTcccc < 2:4076301/140‑1 (MQ=255) ccAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑GCCGCCCTTACAACATCCTGCATAGGGAACCCA‑TGATCCGCTGTGCACCAACTACTAAATTTTCCCCCCGTTaaaaa > 1:2661471/1‑138 (MQ=255) cAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAACTAGCACTAA‑CCCCCCCTCACACCCCCCTGCATACGGAACACC‑TTTTCCCCTGTCCACCCACCACTAAATTTCCCCCCCTTTACACtt < 2:2477440/140‑1 (MQ=255) ataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCa < 2:569163/140‑1 (MQ=255) ataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCa < 2:3976681/140‑1 (MQ=255) ttCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAACACCCCCCT‑ACAGAGCCCTCCATAGGGATCACG‑ATGTCCCGTGTGCATCCACGACTATATTTCCCCCCCTTTAAGCCTCTTaatatcg > 1:4507082/1‑137 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTTACAACATCCTCCATAGGGAACACC‑TTTTCCCCTGTCCACCCACGACTAAATTTCGCCCCATTTAAACTTCACAATAATATCa > 2:1114118/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCAGAGCGTCCTGCAGAGGGAACACG‑TTTTCCCCTATGCACCCACGACTAAATTTCCCGCCGTTTAAACTTATTAATAATGtaa > 1:4692973/1‑138 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCACCTCACAACGTCTTGTATAGGGAACACA‑TTTTCCCCTATGCACCCACTACTAAATTTGCACCCCTTTAAACTTCTCAATAATGTCa > 2:3881669/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCACCCTCACAACGTCCTGCATAGTGAACAGG‑TTTTGCCCTGTACACCCACGACTAAATTACCCACCCTTTAAACTTCTCAGTACTGtga > 1:4306999/1‑138 (MQ=255) tttGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCACCCATCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTTTGCACCCACGACTAAAGTTCCCCCCCTTTAAACTGGACAATAATGGCACAAAt > 2:4734618/1‑140 (MQ=255) tGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTgg < 1:2551890/140‑1 (MQ=255) tatTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGaaa < 2:4577901/140‑1 (MQ=255) ttGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACATCGTCCTGCATAGGGAACACG‑TTTTACCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatg < 2:212830/140‑1 (MQ=255) gTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTCCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat < 2:1885603/140‑1 (MQ=255) tCCAATATGATCAAATAGCATTAA‑GCCCCCCTCACAACGTACTGAGTAGCGAACACG‑GTTTCCCCCCTCCACCCACCACTCAACCTCCCCCCCTTTATAAGTCTCAAAAACTTCACAACTTTTCTGGAAATCCtggaacc > 2:1158506/1‑134 (MQ=255) tCCAATATGATCAAATAGCATTAA‑CCTTCCCTACCAACGTCTTGCAAAGGGAAAAAGAAGTTCCCGTG‑GCACGAACTATGAAATTTCTCTCCTTTTAATGTTTTCAATAATGTCAGCATTTTTCTGTGAATCATctgatg > 2:1559259/1‑140 (MQ=255) tCCAATATGATCAAATAGCATTAA‑CCCCGCCTGACAACGTCGTGCATAGGGAACACG‑TTCACTCCTGTGCACCCACGACTAAATTTCGCCTCCTTTAATCGATTCAACCTTGTCACCAATCTTCTGTAATTCCTacgaag > 2:3301546/1‑138 (MQ=255) tCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCtgtg > 2:2660543/1‑69 (MQ=255) tCCAATATGATCAAATAGCATTAA‑CCCCCCCTAACCACGTCCTCCATAGGGAACACG‑TTTTCCCCTTTGCACCTACGACTAAATGTACCCCCCCTTAACCTTCTCAATATTGACACCAACTTTCGGGAAATCCTatgaat > 2:1581046/1‑138 (MQ=255) aaTATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCt < 1:1483062/140‑1 (MQ=255) aaTATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCt < 2:2034817/140‑1 (MQ=255) atGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTc < 1:1155034/140‑1 (MQ=255) atGATCAAATAGCATTAA‑CAACCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCCCGACTAACTTTCCCCCCCTTTAAACTTCTCACTAATGTCAACAATTTTCTGGAAATCCTATGATGCCTTTc < 2:4603347/140‑1 (MQ=255) tCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc > 2:466234/1‑54 (MQ=255) tCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTccc < 1:466234/54‑1 (MQ=255) tCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCgg > 2:1146759/1‑140 (MQ=255) aaTAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTaa < 1:567500/140‑1 (MQ=255) aTAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAACTTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTaaa < 2:4699253/140‑1 (MQ=255) aTAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTaaa < 1:930526/140‑1 (MQ=255) cATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGt < 1:31566/140‑1 (MQ=255) cATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGt < 1:4625041/140‑1 (MQ=255) | AGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCCTCACAACGTCCTGCATAGGGAACACG‑TTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGT > NZ_CP025268/2771324‑2771601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |