| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,175,450 | +G | pseudogene (483/632 nt) | comR ← | TetR family copper‑responsive transcriptional repressor ComR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,175,448 | 1 | . | G | 99.6% | 908.6 / ‑4.0 | 271 | pseudogene (485/632 nt) | comR | TetR family copper‑responsive transcriptional repressor ComR |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (104/166); total (104/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 280 total aligned reads displayed.
CAGTTCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑G‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAG > NZ_CP025268/1175310‑1175582 | ttCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑g‑gga > 1:1273591/1‑138 (MQ=255) gCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTcc > 2:1839391/1‑140 (MQ=255) aaaCGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCcgcg > 1:4623626/1‑140 (MQ=255) gCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCt < 1:3279569/140‑1 (MQ=255) cAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCtt > 1:4517327/1‑140 (MQ=255) aaGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGt > 2:2571524/1‑140 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 1:745643/140‑1 (MQ=255) cGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGtt < 2:628717/140‑1 (MQ=255) atCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGCCGTTGa > 2:4940473/2‑140 (MQ=255) tCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGAc > 2:3829627/1‑140 (MQ=255) tCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGAc > 1:5101316/1‑140 (MQ=255) cAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaa < 1:1655222/140‑1 (MQ=255) cAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaa < 2:1538984/140‑1 (MQ=255) aTCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaaaa < 1:1902925/140‑1 (MQ=255) aTCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATaaaaa < 2:3975472/140‑1 (MQ=255) cATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAActgct > 2:3132398/1‑140 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGTGC‑GTGATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 2:3548733/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:1111811/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 2:4981552/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:3662523/140‑1 (MQ=255) tttCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTg < 1:3362497/140‑1 (MQ=255) tCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTgcg < 1:2375803/140‑1 (MQ=255) tCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTgcg < 1:3470161/140‑1 (MQ=255) cGATGCACCTTCGCGTGCGCTGATCGACATCGCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCtt > 2:3880022/1‑140 (MQ=255) tGCACCTTCGAGTCCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCa < 2:2987188/140‑1 (MQ=255) gCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATAGAATTGAGGAATTCTGCCAGAGGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGGCGTTGACATAAAAGCTGCTGCAAAGTGCGCTCTGGCAt < 2:1766597/140‑1 (MQ=255) ttCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCAt < 1:3763880/140‑1 (MQ=255) cgTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCg > 1:2128661/1‑140 (MQ=255) cgcTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATTGCGTGAt > 1:3195749/1‑140 (MQ=255) cTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGAttt < 1:623915/140‑1 (MQ=255) gATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCa < 1:4902896/140‑1 (MQ=255) gATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCa < 2:1485552/140‑1 (MQ=255) aTCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCaa > 2:4579424/1‑140 (MQ=255) aTCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCaa > 1:4035871/1‑140 (MQ=255) gACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGt < 1:2718539/140‑1 (MQ=255) aCATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTa < 1:4330509/140‑1 (MQ=255) aCATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTa < 1:1139807/140‑1 (MQ=255) aCATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTa < 1:3702335/140‑1 (MQ=255) ccTGAATAATACAATTAAGTAATTCTCCCAGATGTTTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCg > 2:4092197/1‑140 (MQ=255) ccTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCg > 1:1429943/1‑140 (MQ=255) tGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGat < 2:2884322/140‑1 (MQ=255) tGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGat < 1:3560535/140‑1 (MQ=255) ggaaggataCACGTAAGGAATTCGGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAACAGCTGCTGCAAAGTGCGCTCTTGCAGCGCATGGCGTGATTTCACCGTATTGGCGat < 2:2718525/134‑1 (MQ=255) gAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGata < 2:4187843/140‑1 (MQ=255) aataatACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGt > 2:1141617/1‑118 (MQ=255) ataCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTcc < 2:3662341/140‑1 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 1:1614744/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 2:3368537/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 1:3645378/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 1:3372145/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 1:4293618/1‑140 (MQ=255) taCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCt > 1:3322208/1‑140 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 2:1920459/140‑1 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 2:77257/140‑1 (MQ=255) aCAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTg < 2:106210/140‑1 (MQ=255) aTTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAAt < 2:1077671/140‑1 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTTGCGATATCTCCTGAATc > 1:301522/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:3056052/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:3809103/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:1063634/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 2:162922/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc > 1:2498660/1‑140 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATc < 2:1186969/140‑1 (MQ=255) ttAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGAGTTCAACGTATTGGCGATATCTCCTGAATc > 1:3907195/1‑140 (MQ=255) tAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATGAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCt < 2:4691455/140‑1 (MQ=255) tAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCt < 1:2259819/140‑1 (MQ=255) tAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCt < 1:835295/140‑1 (MQ=255) tAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCt < 1:3253686/140‑1 (MQ=255) ggAATTCTGCCAGATGTGGCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTggg < 2:2016920/140‑1 (MQ=255) gAATTCTGCCAGATGTGTCACGTCACAGTGGAGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATGTGCGATCTCTCCTGAATCTgggg > 2:444857/1‑140 (MQ=255) aaTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 1:360825/140‑1 (MQ=255) aaTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 2:2150647/140‑1 (MQ=255) aaTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 2:3187771/140‑1 (MQ=255) aaTTCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGga < 1:3081104/140‑1 (MQ=255) ttCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGgaga < 1:4770310/140‑1 (MQ=255) ttCTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTCCGCCGCGCGCTGGTCGTTGACATAAAAGCTGCTGCAAAGTGCGCTCTTGCAGCGGATGGCGTGATTTCAGCGTATTGGCGATATCGCCTGAATCTGGGgaga < 2:674383/140‑1 (MQ=255) cTGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAgg > 2:2088951/1‑140 (MQ=255) tgaccgATGTGGCCCGTCACGGTGGGGCGG‑GATTTGCCCGCGCGCTTGTCGTCGACATAAAAACTGCTGCAACGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 2:2682443/135‑1 (MQ=255) tGCCAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAggg < 1:4431554/140‑1 (MQ=255) ggCCAGATGTGTCACGGCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATAGCTCCTGAATCTGGGGAGAggg < 2:4771712/139‑1 (MQ=255) ccAGATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGggtg > 2:3469624/1‑140 (MQ=255) caaatatgtCACGTCACAGTGGAGCGG‑GATTTCCCCGCGCGCTAGTCGTTGCCATAAAAAATGCTGCAAAGTGAAATATCGCATCGCATGGCGTGATTTCAACGTATTAGCGATCTCTCCTGAATCTGAGAAGAGggtgg < 2:2279007/134‑1 (MQ=255) gaggtgtCACGTCACGGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGGATGGGGTGGTTGCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:1274694/137‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:1873855/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 2:1412269/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:3006940/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 2:2559990/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 2:4517520/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:2334266/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 1:4054088/140‑1 (MQ=255) gATGTGTCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTGGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCCACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 2:4314587/140‑1 (MQ=255) gATGTGGCACGTCACAGTGGGGCGG‑GATTTCCCCGCGCTCTTGTCATTGACATAAAGACTGCTGCAAAGTGCGCTCTTGCATCTCATGGCGTGATTCCGACGTATCGGCGATATCTCCTGAATCTGGGGAGAGGgtggtg < 2:1637340/140‑1 (MQ=255) cacgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgt > 1:4704569/1‑140 (MQ=255) cacgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgt < 1:1360961/140‑1 (MQ=255) acgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgtt < 1:903661/140‑1 (MQ=255) acgtcacAGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAgttgtt < 1:1942710/140‑1 (MQ=255) tcacAGTGGGGCGG‑GCTTTCCCTGCGCGCTTGTCGTTGACATAAAAACTGCTGCATAGTTCGCTCTTGCATCGCATGGCGTGCTTTCAACGTATTGGCGATATCTCCAGAGTCTGGGGAGGGGGTGGTGCAGTCGTTGAt > 1:1760808/1‑140 (MQ=255) cacaGTGGGGCGG‑GATTTCCCCGCGCGCGTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCGGGGGAGAGGGTGGTGCAGTTGTTGATc < 2:2403414/140‑1 (MQ=255) caGTGGGGCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCAt > 1:2827357/1‑140 (MQ=255) ggggCGG‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGCGGTGCAGTTGTTGATCATGAag < 1:3880022/140‑1 (MQ=255) | CAGTTCGGGCCATAAACGCAAAGTCGTTCCGGCAATCTGCATCAGTTTTTCCAGCGATGCACCTTCGCGTGCGCTGATCGACATCCCCTGAATAATACAATTAAGGAATTCTGCCAGATGTGTCACGTCACAGTGGGGC‑G‑GATTTCCCCGCGCGCTTGTCGTTGACATAAAAACTGCTGCAAAGTGCGCTCTTGCATCGCATGGCGTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAG > NZ_CP025268/1175310‑1175582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |