| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,629,176 | (T)7→8 | pseudogene (141/392 nt) | ydeI ← | YdeI family stress tolerance OB fold protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,629,169 | 1 | . | T | 94.6% | 611.2 / 22.2 | 168 | pseudogene (148/392 nt) | ydeI | YdeI family stress tolerance OB fold protein |
| Reads supporting (aligned to +/- strand): ref base . (2/7); new base T (52/106); total (54/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 172 total aligned reads displayed.
GCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCA‑T‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACA > NZ_CP025268/1629034‑1629299 | gCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCA‑t‑tt‑t > 1:4185237/1‑140 (MQ=255) ccGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCA‑t‑tt‑tt > 2:5079917/1‑140 (MQ=255) ccGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCA‑t‑tt‑tt > 2:3024700/1‑140 (MQ=255) tAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGG‑TTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑Gcatcat < 1:1909118/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑Gcatcat < 1:4608783/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑Gcatcat < 1:2194479/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑Gcatcat < 1:2191047/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑Gcatcat < 2:1973233/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑Gcatcat < 2:290941/140‑1 (MQ=255) gACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACCGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCgg > 2:4175238/1‑140 (MQ=255) cATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGtt < 1:1697012/140‑1 (MQ=255) cATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGtt < 1:1026671/140‑1 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAGACCGAAGCGCCATCGTGAATGTTTTTTGCGAAATCAACGG‑TCA‑T‑TTGTTTT‑GCATCATCGGttt > 2:1667782/1‑139 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTc > 2:4075582/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTc > 2:3397347/1‑140 (MQ=255) tttCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGa < 1:3732460/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAg < 1:2854206/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAg < 2:4557306/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAg < 1:2806658/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAg < 2:480799/140‑1 (MQ=255) cACCGCTCTTATCGAGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAg < 2:3948000/140‑1 (MQ=255) cACCGCTCTGATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCAATCGTGCATAGTTTTTGCGAAATAAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAg < 1:555492/140‑1 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGc > 1:260545/1‑140 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGcc < 1:2036885/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGcc < 2:1602912/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCAtc < 2:43180/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCAtc < 1:4431349/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCAtc < 1:3001922/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCAtc < 1:1845091/140‑1 (MQ=255) cgctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCAtc < 1:3165615/138‑1 (MQ=255) attATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCAtctt < 1:4512335/139‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTa > 2:848096/1‑140 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTa > 1:974181/1‑140 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 2:974181/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:55856/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 2:2913579/140‑1 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt > 2:3330393/1‑140 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt > 2:4294214/1‑140 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt > 1:996929/1‑140 (MQ=255) aaaCGTAACGGTCCTCTCCTTTGCGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGa < 2:4839092/140‑1 (MQ=255) cgcaaCGATCCTCTCCTTTGTGAGAAATCAATTTACCGCGTCGTGAACGTTGAGCCCCGTCTTGCCTCGTCTTTGCGCAATCAACGGCTAG‑C‑TT‑TTAT‑GCATCATCGCTTCAGCGATAGCCATCTTCTTTTGCATGAgcc < 2:4939850/137‑3 (MQ=255) cGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggc < 2:1085636/140‑1 (MQ=255) tAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggcgg < 2:4019647/140‑1 (MQ=255) cGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 2:877404/140‑1 (MQ=255) cGGTCCTCTCCTTTGTAAGAAATCCAATTACCGCGTAGTGACACCGAAGCCCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCCTCATCTGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 2:1747383/140‑1 (MQ=255) cGGTCCTCTCCGTCGTGAGAAATCAAATTACCGCGTAGTGAAACAGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACCG‑TCA‑T‑TT‑TTTTCGCATCATCGGTTTCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 2:1747204/140‑1 (MQ=255) ctCCTCTCCTTCGTGAGCAATCAAATTACCGCGTAGTGCAACCGAAGCGCCCTCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑CCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 2:9716/139‑1 (MQ=255) ctctCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGTGGTGgcg > 2:1368537/1‑140 (MQ=255) tctcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGgcgc > 2:3127642/1‑140 (MQ=255) cTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCa > 1:816373/1‑140 (MQ=255) cTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCa < 2:759499/140‑1 (MQ=255) cTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCa < 1:3310034/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:1343933/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:4152047/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:4969149/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:4752258/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCACGTAGTGTAACCGAAGCGCCATCGTGCATGGTTTTTGCGATATCAACGG‑TAATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTGTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:1963512/140‑1 (MQ=255) ttGTCAAAAATCACATTACCGCGTAGTGAAACCGAAGCGCCATCATGCATGGTTTTTGCGAAACCAACGG‑TCA‑T‑TT‑TTTTAGCATAATCGGTTCCGCGATAGCCATCTTCTATTGCCTGAGGCGGCGGTGGCGCTGCATc < 2:1371874/140‑1 (MQ=255) ttGGGAGAAATCAAATTACCGCGTAGTGCAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCACCGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:162615/140‑1 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 1:520797/1‑140 (MQ=255) agaAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGtt > 2:2268773/1‑140 (MQ=255) gaAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGttt > 2:3258995/1‑140 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTa > 2:4386387/1‑140 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTa > 1:360846/1‑140 (MQ=255) ttACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGcc < 1:3022008/140‑1 (MQ=255) aGTGAAACCGAAGCGCCAGCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATc > 2:4448313/1‑140 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 2:2679781/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:5027662/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:4083383/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 1:1963307/140‑1 (MQ=255) aCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCaa < 1:1099353/140‑1 (MQ=255) aCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GAATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCaa > 2:4646286/1‑140 (MQ=255) aCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCA‑T‑TTGTTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCaa < 1:3935568/140‑1 (MQ=255) ccGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAAc < 2:2462111/140‑1 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCGTCTGCCAACGCa > 2:3593146/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGcc > 2:2643732/1‑139 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa > 2:3594397/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa > 1:1627135/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 2:2038095/140‑1 (MQ=255) aGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCAt > 1:119951/1‑140 (MQ=255) aGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCAt < 1:1890504/140‑1 (MQ=255) aGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCAt < 2:4085637/140‑1 (MQ=255) gcgcCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATa > 1:911155/1‑140 (MQ=255) tCGTGCATGGTTTTTTCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGTGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAACCCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:1505554/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 1:2754424/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 1:3694394/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATAGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt > 2:4694379/1‑140 (MQ=255) cGTGCATGGTTTTTGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATg < 1:3813643/140‑1 (MQ=255) tttttGCGAAATCAACTG‑TCA‑TCTT‑TTTT‑GAATCATCGTTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCTCTGCATCCTGTTTTAATCCGCCCTGGTCATCTGCAAACCCATACGGCATGACAAGaaaa < 2:1899846/140‑1 (MQ=255) tttttGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:1268874/140‑1 (MQ=255) tttttGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:1377501/140‑1 (MQ=255) tttttGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:1620104/140‑1 (MQ=255) tttttGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:3664358/140‑1 (MQ=255) tttttGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:3161667/140‑1 (MQ=255) tttttGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:4112693/140‑1 (MQ=255) ttGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACtt > 1:4824482/1‑140 (MQ=255) tGCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTg > 2:2797425/1‑140 (MQ=255) gCGAAATCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGc < 1:2039982/140‑1 (MQ=255) aTCAACGG‑TCATT‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTTCCAACGCATAAGGCATGACAAGAAAACTTGCTAATa > 1:3954812/1‑140 (MQ=255) tCAACGG‑TCA‑T‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACa < 1:4192936/140‑1 (MQ=255) | GCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGG‑TCA‑T‑TT‑TTTT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACA > NZ_CP025268/1629034‑1629299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |