Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP025268 | 247,295 | +G | intergenic (+4/‑171) | yafL → / → rayT | C40 family peptidase/REP‑associated tyrosine transposase RayT |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP025268 | 247,294 | 1 | . | G | 97.5% | 655.5 / 8.0 | 202 | intergenic (+3/‑172) | yafL/rayT | C40 family peptidase/REP‑associated tyrosine transposase RayT |
Reads supporting (aligned to +/- strand): ref base . (4/1); new base G (68/128); total (72/130) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.64e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 225 total aligned reads displayed.
TGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAAGA‑C‑G‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGCCAACCTT > NZ_CP025268/247155‑247429 | tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 2:2604284/1‑140 (MQ=255) tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:4919749/1‑140 (MQ=255) tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:1286598/1‑140 (MQ=255) tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:3712948/1‑140 (MQ=255) tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:349332/1‑140 (MQ=255) tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑c > 1:92479/1‑140 (MQ=255) gtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑g > 1:4450308/1‑140 (MQ=255) tATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑gg > 1:3308355/1‑139 (MQ=255) tGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑C‑ggataa < 1:2515454/140‑6 (MQ=255) attggCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGAGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGtt < 2:4020088/137‑1 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGtt > 2:1827032/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTGTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGtt > 1:4240432/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATATTTTGGGCGCGCGCAGGATTTTGACGGAATAGACGATTTTGTAGGA‑CGG‑ATAAGGCGtt > 1:2812568/1‑140 (MQ=255) ggCAATTTATCGAGGCGCCACGTACTGGCGAAACGATTAGGATAAGCCGATTAGCCGAAGCTTTTTGGCAGGTCCTATTTTTGGGTGCGCGCAGGATTGGTACGGAAGAGGCGATTTTGTAGGAGG‑G‑ATACGGCGTTTAc > 2:1394244/1‑140 (MQ=255) gCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTAcg < 1:357709/140‑1 (MQ=255) atctATCGCGTCCACACGTACCGGCGAAACCATTCCGATAAGCCGATTAGCAGAACCTTTCTGGCAGCACCATTTTTTGCGCGCGCGCAGGATTCTGACGGAAGAGCCCATTTTGTCGGA‑CAG‑ATAAGGCGTTTAcgccg < 2:2966141/137‑1 (MQ=255) ttATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCa < 1:2999567/140‑1 (MQ=255) ttATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACATTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCa < 1:2743536/140‑1 (MQ=255) ttCGAGTCGCCACGTACCGGCGAACCCATTCGGATACGCCGATTAGCCGAACCCTTCTGGCAGGACCATTTTTTGGGAGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATc < 2:238535/139‑1 (MQ=38) aTCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGATACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGGCGCAtt > 2:278000/1‑139 (MQ=255) cGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGACCCTTTCTGGCAGGACCATTTTTTGTGCGCGCGCAGCATTTTGACGGAAGAGACGATGTTGTAGGA‑CGG‑ATAAGGCGTTTACGGCGCATCCg > 2:3724670/1‑140 (MQ=255) cGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCg > 1:4774054/1‑140 (MQ=255) cGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTCTACGCCGCATCCg > 2:4379822/1‑140 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAGCCTTTCTGGCAGGACCATTTGTTGGGCGCGTGCAGGATTTTGGCGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCgg < 2:4690310/140‑1 (MQ=38) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCgg < 1:2147423/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCgg < 1:4173855/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCgg < 1:5043566/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCgg < 2:1948083/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCgg < 1:327735/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCgg < 1:2687229/140‑1 (MQ=255) tCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAg < 2:2078254/140‑1 (MQ=255) tCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAg < 1:1995090/140‑1 (MQ=255) tCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCATTTACGCCGCATCCGGCAg < 2:4480963/140‑1 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa < 2:3209875/140‑1 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa < 1:743681/140‑1 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa > 1:1938655/1‑140 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa > 2:3168560/1‑140 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGCAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa < 2:4662244/140‑1 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg > 2:2648000/1‑140 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg > 2:1495085/1‑140 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg < 2:4818754/140‑1 (MQ=255) ggCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGt < 2:699650/140‑1 (MQ=255) gCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTg > 1:3777390/1‑140 (MQ=255) gAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGcc < 1:4602473/140‑1 (MQ=255) aaaCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCt > 1:1365876/1‑140 (MQ=255) aCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGa > 2:782295/1‑140 (MQ=255) aCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGa > 2:3243843/1‑140 (MQ=255) aCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGa < 2:2866720/140‑1 (MQ=255) aCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGa > 1:1030999/1‑140 (MQ=255) cATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATg < 2:3282297/140‑1 (MQ=255) tCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGa > 2:3463045/1‑140 (MQ=255) ggATAAGCCGATTGGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACg < 1:618368/140‑1 (MQ=255) ggATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACg < 1:2255537/140‑1 (MQ=255) aTAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCt < 1:429828/140‑1 (MQ=255) tAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTg > 1:3268692/1‑140 (MQ=255) ggCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:4507164/139‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:1554214/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:3827165/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:3925554/140‑1 (MQ=255) aGCCGATTAGCCCAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc > 2:5027540/1‑140 (MQ=39) aGCAGATTAGCCGAAGCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGCA‑CGG‑ATAATGCGTTTACGCCGCGTCCGTCAGTTGTTCGCAGGTGCCTGATGCGACGCTGgc < 2:1059337/140‑1 (MQ=37) ccGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTCGGA‑CGG‑ATAAGGCGTTTCCGCCGCATCCGGCAGTTGTCCGCAGGTGCCTGATGCGACGCTGgcgc < 2:2424243/140‑1 (MQ=38) cGATTAGCCGAACCTGTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAAGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGcgcg < 2:412049/140‑1 (MQ=255) gATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGt < 2:253500/140‑1 (MQ=255) gATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGt < 2:5060019/140‑1 (MQ=255) aTTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTc > 2:3856904/1‑140 (MQ=255) aTTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTc > 2:1494803/1‑140 (MQ=255) ttAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCt > 2:4329703/1‑140 (MQ=255) tAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGGAGGATTTTGACGGAAGAGTCTTTTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCtt > 2:1345154/1‑140 (MQ=25) tAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCtt > 2:2667173/1‑140 (MQ=255) aGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGAGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTa < 1:691869/140‑1 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc < 2:1685772/140‑1 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc < 1:1010763/140‑1 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc < 1:4598879/140‑1 (MQ=255) tCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACg > 1:4984208/1‑140 (MQ=255) gACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCcgcg > 1:4423557/1‑140 (MQ=255) aCCATTTTTTGGGCGCGCGCAGGGTTTTGACGGAAGAGACGATGTTGTAGGATG‑G‑ATAAGGCGTTTACTCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTGTCATGCCTACTAGCCCTCGa > 2:609949/1‑140 (MQ=21) tGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCg > 2:1885567/1‑140 (MQ=255) cgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGc > 1:1231242/1‑140 (MQ=255) cgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGc < 1:1675919/140‑1 (MQ=255) cgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACACTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGc > 2:728880/1‑140 (MQ=255) cgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTGTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATAGTTGCGAGCCGc > 2:545366/1‑140 (MQ=25) cgcAGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCtt > 1:3276999/1‑140 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:3524719/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 2:3777390/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:3179701/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 2:1125259/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:3051367/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:2593284/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:2578735/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:4833322/140‑1 (MQ=255) ggATTTTGACGGAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTccc < 1:1827032/140‑1 (MQ=255) tgcaCGAAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTCAGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGatat < 2:803078/137‑1 (MQ=21) ggAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAaac < 1:3091320/140‑1 (MQ=255) gAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAaaca > 1:2349904/1‑140 (MQ=255) gAAGAGACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAaaca > 2:3389783/1‑140 (MQ=255) gAAGAGACGATTTTGTAGGA‑C‑GTATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGCTATAAacca > 1:1477542/1‑140 (MQ=25) agagACGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAaacaac > 1:5022786/1‑140 (MQ=255) gagaCGATTTTGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAAcc < 2:1165181/140‑1 (MQ=255) tttGTAGGA‑CGG‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGcc > 2:2174062/1‑140 (MQ=255) | TGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAAGA‑C‑G‑ATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGCCAACCTT > NZ_CP025268/247155‑247429 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |