| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,769,852 | +C | intergenic (‑52/‑89) | yfjM ← / → rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,769,848 | 1 | . | C | 96.4% | 713.3 / 17.1 | 226 | intergenic (‑48/‑93) | yfjM/rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Reads supporting (aligned to +/- strand): ref base . (3/5); new base C (86/131); total (89/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 243 total aligned reads displayed.
TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑CCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769710‑2769982 | cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 2:1304553/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 1:5083705/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 2:3375180/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 1:3862987/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 2:560462/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 2:3761626/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 1:3231911/140‑1 (MQ=255) gCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAgg < 1:1928771/140‑1 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCTCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑GGCCCCC‑TATTCAGGttg > 1:2724180/1‑138 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTgg < 2:2278102/140‑1 (MQ=255) ttACTAAGTATCGAGTTGCTCCTTCGTGAGATCAGGACGAGCTTACCGAAACCATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGACCCTGCACTATAGTTGGAG‑CGCCCCC‑TACTCAGCTGGCTaaa < 2:2147026/140‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGCG‑TGCCCCC‑TATTCAGGTGGCTAAAtt > 2:4061411/1‑140 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAg < 1:1287392/140‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGTCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCa < 2:4673569/140‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCa < 1:1211537/140‑1 (MQ=255) atATCGAGTTGCTGGTTGGTGAGCTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCa < 2:671737/139‑1 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCaa > 2:2499251/1‑140 (MQ=255) tCGAGTTGCTGCTTGGTGAGGGCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTGAGCAAAt < 2:3821310/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAAt < 2:768601/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACAGCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCACTATAGTTGGAG‑TG‑CCCCGTATTCAGGTGGCTCACTTTAGGAAAt > 2:1515899/1‑140 (MQ=255) cGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATc > 1:4885851/1‑140 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCaa < 1:189001/140‑1 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCaa > 1:23144/1‑140 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAAt < 2:3921661/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGCTCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1968822/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:5066878/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:2367646/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:226703/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGACGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:4645361/140‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATaca < 2:1245940/140‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATacac > 1:1943704/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:2584085/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:3516901/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATATAGCAAATCAATacac > 1:4157696/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATGCAGGTGGCTAAATTTAGCAAATCAATacac > 1:850529/1‑140 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg < 1:1516591/140‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg < 2:4857858/140‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 2:3411039/140‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 2:2549173/140‑1 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 2:3023733/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:2183305/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:3339624/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:4291097/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:4353929/140‑1 (MQ=255) gtCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:65758/139‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta > 2:4513740/1‑140 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:4452153/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:3998849/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:4730390/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:4175842/140‑1 (MQ=255) tctggcagatGTTACCGACACGATGGACATCATCCCCCTTTTTGTGGACTGCCCCCCCGGTTGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCACATCAATACACTTCAGGGGGGtat < 2:1601979/134‑1 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatta < 2:3693914/140‑1 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 2:3948437/140‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga > 2:316824/1‑140 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga > 1:962235/1‑140 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTagag > 2:2725219/1‑140 (MQ=255) ttACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGt < 1:3304340/140‑1 (MQ=255) ttACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGt < 2:1912100/140‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcc < 1:2954077/140‑1 (MQ=255) aaaCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcccc < 2:3109896/140‑1 (MQ=255) aaCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCa > 1:1662912/1‑140 (MQ=255) aaCGATGGACATCATCCCCCATTTTGTGGACGGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGACCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATAAACTTCAGGGGGGTATTATTGTAGAGTTTCCCCa < 1:1142943/140‑1 (MQ=255) aCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCat < 2:4953098/140‑1 (MQ=255) tagACATTACCCACCATTTGGTGGACTGCCCCCCCGGCAGATGATCCTGCCCTATAGTTCTAGTTT‑CTAC‑TATTTAGGTGGCTAGATTTATCAAATCAAGACGCTTCAGGGGGGTATTATTCTAGAGTTTCCCCATATGt < 2:4942761/138‑1 (MQ=255) tGGACATCATCCCCCAATTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGt < 1:4154295/140‑1 (MQ=255) tcatcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTAt < 1:2573294/140‑1 (MQ=255) cccccATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATGAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGa > 2:1334141/1‑140 (MQ=255) tgtgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGaaa < 1:4695987/140‑1 (MQ=255) gtgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAAt < 2:2463725/140‑1 (MQ=255) gACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGAc > 2:458524/1‑140 (MQ=255) gCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATc < 1:316824/140‑1 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 2:2158808/1‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 2:5003861/1‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 1:1544659/1‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 1:1682162/1‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 1:525638/1‑140 (MQ=255) ccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGt > 2:1107714/1‑140 (MQ=255) aGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa < 1:3570866/140‑1 (MQ=255) aGACGATCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa < 1:1107714/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGCGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 2:906932/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:4308823/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:815587/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:155647/140‑1 (MQ=255) tCCTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGTGATCCAGGAAATGACAATCAGGAGTTACAAAAACtt > 1:2636948/1‑140 (MQ=255) ccTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTa > 1:3496310/1‑140 (MQ=255) ccTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTa > 1:1348681/1‑140 (MQ=255) ccTGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAAGGACAATCAGGAGTTACAAAAACTTa > 1:1387973/1‑140 (MQ=255) tGCCCTATAGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACGTaaa > 2:3255588/1‑140 (MQ=255) taGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 2:910278/1‑140 (MQ=255) taGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:1791065/140‑1 (MQ=255) taGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:4829580/140‑1 (MQ=255) taGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:371170/140‑1 (MQ=255) taGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATAATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 1:3728250/1‑140 (MQ=255) taGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTAGTATTGTAGAGTTTCCCCATATGTTTCTATGGGAGCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:4958500/140‑1 (MQ=255) taGTTGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGCGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 2:2672323/140‑1 (MQ=255) tggagggg‑CCCC‑TATTCAGGTGGCGAAATTTAGCAAATCAGGACACTCCAGGGGGGTATTATTGTAGAGTTTCCCCTTATGTTTCTATGGGATATAGGAAACGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAggg < 2:275/133‑1 (MQ=255) tGGAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAggg < 1:3352409/140‑1 (MQ=255) ggAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:5085704/55‑1 (MQ=255) ggAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTTGTCAGGGc > 1:2904509/1‑140 (MQ=255) gAG‑TGCCCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGTAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCa > 1:1404319/1‑140 (MQ=255) | TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑CCCC‑TATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769710‑2769982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |