| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 94.5% | 932.6 / 45.8 | 314 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (16/1); new base C (221/73); total (239/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.40e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 351 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑C‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 | cGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCg < 1:3348197/140‑1 (MQ=255)cGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCg < 1:1010980/140‑1 (MQ=255) ttgttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTCACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑c‑c < 2:2479620/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGTTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑c‑cccc < 2:5098661/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑c‑cccc < 1:4904679/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑c‑cccc < 2:838985/140‑1 (MQ=255) cGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCtttc < 2:4448278/140‑2 (MQ=255) gACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTaaa < 1:410442/140‑1 (MQ=255) gACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTaaa > 1:977880/1‑140 (MQ=255) ccaccacCGGTCCGCATCGCTATGTGCTCGTGTTCCTCAATCCCCTGGTTATACCTTTTAACCGCCGTTACATCTGGCATTTGCAGAAATAAAAACTAGTTTCTGCGCTGTCCATACCCTG‑GCCGCC‑CCCCTCCTTAAAg > 2:879170/2‑140 (MQ=255) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAg > 2:2395594/1‑140 (MQ=255) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCGGGCTTTTGCAGAAATAAAAAATAGTTTCTGGGTTGTCCATACCCTG‑TCCG‑CGCCCCTCGTTAAAg > 2:3318646/1‑140 (MQ=37) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGGAAt > 2:4228382/1‑140 (MQ=255) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCCTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAAt > 2:172509/1‑140 (MQ=255) ccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATGCCCCGGTTATAGCTTTTAGCCCCCGTTACATCTGGCTTTTGGAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑GGCG‑CGCCCCTCTTTAAAGCAATca > 2:3579552/1‑140 (MQ=255) tCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCAcatc > 2:56237/1‑140 (MQ=255) tCCGCATCGCTATGTGCTCGTGTGCATCAATCACCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGATTCTGCGTTGTCCATACCCTGAGCCC‑C‑CCCCTCTTTAAAGTAATCAcatc > 2:3375281/1‑140 (MQ=25) cGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAACGTAATCAcatcat > 1:207586/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATATCTTTTAACCCCCGTTACATCTGGCTTTTGCCGAAATAAACAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAATGAATCACATCAttt > 2:3216314/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGTCTTTTGCAGAAATAAAAAAGAGTTTCTGCGGTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCAttt > 2:2667754/1‑140 (MQ=25) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAATTAATCCCATCAttt > 1:4745855/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCAttt > 2:4810715/1‑140 (MQ=255) cGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTtca < 1:2431418/140‑1 (MQ=255) cGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTgca > 1:2998025/1‑140 (MQ=255) cGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTAGAGCTTTTAATCCCCGTTACATCTGGCTTTTGCAGAAATAAAAGATAGTTTCTGCGTTGTCCATACCATG‑TCCGCC‑CCCCTCTTTAAGGTAACCACATGATTTtca > 2:2942949/1‑140 (MQ=255) tgtgCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTtcagtcag > 1:3176334/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTACTCACATCATTTTCAGTCAGTTaa < 2:693089/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:2665164/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 2:4287578/140‑1 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCGTTTAACCCCCGGTACATCTGGCTTTTGCAGAAATAAAAAATATTTTCTGCGTTGTCCATATCCTG‑TCCGCC‑CCCCGCTTTAACGTAATCACATCATATTCAGTCAGGTAACgtt > 1:558458/1‑140 (MQ=18) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGGTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑CACCCCTCTTTAAAGTAATAACATCATTTTCAATCAGTTAACTTTcc > 1:4019507/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGGTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTACTg > 2:4652504/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTACTCACCTCATTCTCAGTCAGTTAACTTTCCTg > 1:4827447/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTtcagtcag > 2:3119267/1‑128 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 2:3708205/1‑140 (MQ=255) cAATCCCCCGGTTATAGCTTTTAACCCCCGTTACGTTTGGCTTTTGCAGAAATAAAAAATGGCTTCTGCGTTGGCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGGATTCGCATCATGTTCAGTCAGTTAACTTTCCTggtg > 2:2877120/1‑138 (MQ=255) aaTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGgaga < 2:1366552/140‑1 (MQ=255) ctCCCCCGGTTATAGCTTTTACCCCCCCTTACATCTGGCTGTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATCCCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 2:3914646/139‑1 (MQ=18) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTCTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 2:2004844/140‑1 (MQ=255) ccccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:2525800/139‑1 (MQ=255) cccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 2:2525844/140‑1 (MQ=255) ccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtct < 1:130268/140‑1 (MQ=255) ccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtct > 1:5076806/1‑140 (MQ=255) cGGTTATAGCTTTTAACGCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTAAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGCAtctctc > 2:4087622/1‑140 (MQ=18) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTACTCAAATTATTCTCAGTCAGTTAACTTTCCTGGAGAAtctcta > 1:2007852/1‑139 (MQ=18) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc > 1:2426883/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTTTCCCTACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCCCATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGcc > 2:4968626/1‑139 (MQ=17) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 1:747059/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 1:2168338/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 1:2906607/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:4890843/1‑140 (MQ=255) cccccGTGACATCTGGCGTTAGCAGAAATAAAAAATCGTTTCTGCGGTGTCGATACCCTC‑TCCGCC‑CCCCTCTTTAAAGTCATCACATCATCTTCAGACAGTTAACTTTCCTGGAGAATCTATCAAGAGCCAGGCAGAAc < 2:504199/140‑1 (MQ=255) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 2:1934791/140‑1 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg > 2:461414/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcaccg > 1:3895065/1‑140 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAc > 2:3986582/1‑140 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGAAGAACGCCGCCATGAc > 1:2839734/1‑140 (MQ=255) cTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAcc > 1:704788/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑c‑cccc < 2:1505911/55‑1 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑c‑cccc > 1:1505911/1‑55 (MQ=255) cTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggct < 1:2282920/140‑1 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCTCCATGACCggctggct > 2:4045392/1‑140 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt > 2:779524/1‑140 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:655551/140‑1 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 1:4600183/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 1:171535/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 1:1070899/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 1:1565002/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 1:3603623/140‑1 (MQ=255) gTTTCTGCGTTGTCCATACACTG‑TCCG‑CACCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGTAGAATCTCTCATGACACAGGCAGAACGCCGCCATGCCCGGCTTGCTGTCAGGCTGTCACTgct > 2:1281625/1‑138 (MQ=14) tCTGCGTTGTCCATACCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAAt > 1:1595701/1‑140 (MQ=255) aCCCTG‑TCCGCC‑CCCCTCTTTAAAGTAATCCCATCATTTTCAGTCAGTTAACTTTCCTGGTGAATCTCTCATGACACAGGCAGAACGCCCCCACGCCCGGCGGGCTGTCCGTCCGTCACTGATACTCAGCCGTCTGGTTg > 2:2177765/1‑140 (MQ=14) g‑TCCGCC‑CCCCTCTTTAAAGTCATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATACTCAGCCGTCTGGTTGCgggg > 1:4253345/1‑139 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACCTCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCCGAACGCCGCCATGACCGGCTGGCCGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2211714/1‑140 (MQ=14) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCGGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3707334/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCCGTTCACTTTCCTGGAGAATCTCTCATGACACCGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2615593/1‑140 (MQ=14) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCCCTGATAATCAGCCGTCTGGTTGCGGGt > 1:1908285/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCGGTCTGGTTGCGGGt > 2:153840/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCgggg > 2:1921563/1‑139 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCgggg > 2:4363056/1‑139 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1553324/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:818387/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4701918/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3932406/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4346516/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1179668/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:462951/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1649561/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:389640/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3764541/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3481077/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3344317/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3410529/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3259074/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2740905/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3201611/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTCATAATCAGCCGTCTGGTGGCGGGt > 2:1124280/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCGGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4184420/1‑140 (MQ=255) g‑TCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTAAGTCAGATAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCAATGACCGGCTGGCTGTCAGGCTATCACTGATAATCAGCAGTCTGGTTGAgggg > 2:2061047/1‑139 (MQ=14) g‑TCCGCC‑CCCCTCTTTAAAGTAAGCAAATCGTTTTCAGTCAGTTAACTTTCGTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCTGCTCGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3046658/1‑140 (MQ=14) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTG‑TCCG‑C‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |