| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,862,734 | +T | intergenic (+9/+41) | pphB → / ← ygbI | protein‑serine/threonine phosphatase/DNA‑binding transcriptional repressor YgbI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,862,733 | 1 | . | T | 98.4% | 704.4 / 1.8 | 192 | intergenic (+8/+42) | pphB/ygbI | protein‑serine/threonine phosphatase/DNA‑binding transcriptional repressor YgbI |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base T (102/85); total (103/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.75e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 206 total aligned reads displayed.
CAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTCATG‑C‑T‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGA > NZ_CP025268/2862594‑2862865 | taaaTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGAAGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑c < 2:456205/139‑1 (MQ=255)caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑c < 1:262831/140‑1 (MQ=255)caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑c < 1:1581912/140‑1 (MQ=255) aaTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑c‑tt > 1:4307087/1‑139 (MQ=255) aTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTATTCTCATG‑c‑ttc > 1:935803/1‑138 (MQ=255) aTAAACGGCGCTGATTATTTTATATTTGGACAGATGATGGGTGATAACATTCAGACGTTCGCGAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCGGTGATTTTATAAAAGAAAGTAGACTCATT‑c‑ttc > 2:1874489/1‑138 (MQ=255) aaaCGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑c‑ttctt < 1:2040850/140‑5 (MQ=255) cgagtatGATTATCTTATTTTTGGACCGATGATGTTTGATAATATTCAGACGTTCGCTAACCAGATTTATATTGATCCCTTATCGCCGAACATCGGGCGGCGGTGATTTTAGAGTATAAAGTAGTCTCTTG‑CTT‑CTTCtg < 2:3520800/134‑1 (MQ=255) cGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCtg < 1:2372792/140‑1 (MQ=255) ggCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCtgt < 1:941814/140‑1 (MQ=255) ggCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCtgt < 2:4274146/140‑1 (MQ=255) gcgcTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCtgtg < 2:2504349/140‑1 (MQ=255) cgcTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGa > 1:1764590/1‑140 (MQ=255) cTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAg < 2:3292900/140‑1 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGc < 2:1467808/140‑1 (MQ=255) attattTTATATTTGGACATAGGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCACCGAACAGCGCGCGGCTGTCATTTTATACAATAACGTAGTCTCATG‑G‑TGCTTCGGTGAAGCAt < 2:4875605/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAAcc < 2:634835/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAAcc < 1:2740528/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAAcc < 2:4451250/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAAcc < 1:2179251/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAAcc < 2:86031/140‑1 (MQ=255) tatTTGGACATGCGATGTTTGATAATATTCAGACGTTAGCTAACCATAGTTATATTGATACCGGATCGTCGAACAGCGCGTGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCC‑T‑CTTCTGTGAAGCATGAGTAAccc < 2:3831556/140‑1 (MQ=255) tatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAAccc < 1:47643/140‑1 (MQ=255) tatTAGGACATATGATGTTAGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGTACAACGAACAGCGAGCGGCTGTCATTTTATAAAATAAAGTAGACTCATG‑CTT‑CTTCTGTGAAGCATGAGTAAccc < 2:2233307/140‑1 (MQ=255) atTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCg > 2:3119848/1‑140 (MQ=255) ggACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAACTAAAGTAGTCTCATG‑CTT‑CTTCTGTGAGGCATGAGTAACCCGgtgt > 2:3546907/1‑140 (MQ=255) ggACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGgtgt > 1:824204/1‑140 (MQ=255) ggACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGgtgt > 1:682532/1‑140 (MQ=255) ggACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGgtgt > 1:4100010/1‑140 (MQ=255) atatGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTAtt < 2:2971245/140‑1 (MQ=255) tatGATGGTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTg < 1:3335223/140‑1 (MQ=255) atgaggTTTGATAACATGAAGACTTTCGCGACCCAGATCTAATTTTATACCGGATAGCCGAACTGCGGGCGGCTGTCATTTTATAAAATACAGTAGTCTCATG‑CTT‑CTTCGGTGAAGCTGGAGCAACCCGTTCTTAGTGc > 2:4324075/1‑140 (MQ=255) tgatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCa < 2:2459857/140‑1 (MQ=255) atgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAgg < 1:2929677/140‑1 (MQ=255) gTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGcc > 2:2665277/1‑140 (MQ=255) gTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGcc > 1:2596350/1‑140 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAATATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCAGTGTTATTGCAGGCCa > 1:2818277/1‑140 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCa > 2:3327416/1‑140 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCa > 1:2313320/1‑140 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCa > 2:5013666/1‑140 (MQ=255) tGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCatt > 2:580595/1‑140 (MQ=255) tCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCAtttt > 1:3716992/1‑140 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 1:736981/140‑1 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 2:3037750/140‑1 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 2:2555127/140‑1 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 1:1318509/1‑140 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 1:246512/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 2:1995568/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 1:4119419/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 1:3964682/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 1:895236/1‑140 (MQ=255) ccAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAag < 1:4631974/140‑1 (MQ=255) cAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAaga < 1:751062/140‑1 (MQ=255) cAGATTTATATTGATACAGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAaga < 2:4203047/140‑1 (MQ=255) aTTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAagagag > 1:4411257/1‑140 (MQ=255) ttATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAt < 1:4596936/140‑1 (MQ=255) tatTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGAAGTCTCATG‑CTT‑CTTCTGTGTAGCATGAGTAACCCGGTGTTATTGTAGGCCATTCTTCATTTTTCGCTACCAGAAAAgagagaccgt > 2:1208807/1‑136 (MQ=255) tGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCt < 1:3100620/140‑1 (MQ=255) gATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAAAAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGGTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCtt > 2:450254/1‑140 (MQ=255) aTACCGGATCGCCGCACAGCGGGCGGCTGTCATTTTATAAAATACAGTAGTCTCCTG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAACAGAGATCCttcttc > 2:4697054/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGTCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 2:4353479/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 2:2289101/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:2921891/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:3671158/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:2079312/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGGTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 2:4317638/1‑140 (MQ=255) aCCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCAc < 1:1197365/140‑1 (MQ=255) aCCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCAc > 2:1403559/1‑140 (MQ=255) ggATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCTAAGAGAGATCCTGCTTCACCAg > 2:2821115/1‑140 (MQ=255) ggATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAg > 2:798671/1‑140 (MQ=255) gATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgc > 2:1029207/1‑140 (MQ=255) gATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgc > 1:473486/1‑140 (MQ=255) gATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgc > 1:3535752/1‑140 (MQ=255) tCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgc < 2:2967410/140‑1 (MQ=255) tCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgc < 2:3670951/140‑1 (MQ=255) gCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTTCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgcgc > 2:674293/1‑140 (MQ=255) gCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGATAGATCCTGCTTCACCAgcgctc > 2:677697/1‑138 (MQ=255) gCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgcgc > 1:2807591/1‑140 (MQ=255) cGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGa > 2:1128685/1‑140 (MQ=255) cAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTgg < 2:146193/140‑1 (MQ=255) cAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTgg < 1:510724/140‑1 (MQ=255) gcgggcggCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 1:2537535/140‑1 (MQ=255) cgggcggCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCAc > 2:1503294/1‑140 (MQ=255) gggcggCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCAct < 1:3809669/140‑1 (MQ=255) gggcggCTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCAct < 1:4548514/140‑1 (MQ=255) ggcggcTGTCATTTTATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTTAAGCATGAGTAACCCGGTGTTATTGCAGGCGATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCActc > 2:4492777/1‑140 (MQ=255) ttttATAAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAAcc > 1:4853352/1‑140 (MQ=255) tttATAAAATAAAGTAGGCTCATGAT‑T‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGAACTCTCCGGCAAACcg < 1:1109903/140‑1 (MQ=255) tataAAATAAAGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGCTATAGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtc < 1:3639017/140‑1 (MQ=255) taaaatcacGTCGTCTCATG‑CTT‑CTTCCGTCACGCATGAGTAACCAAGTGTTATTGCAGGCCATTATTCATTTTTAGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTCGCACTCTCCGGCAAACcgtcgt < 2:1860570/140‑1 (MQ=255) taaaataaaGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcgt < 2:935804/140‑1 (MQ=255) taaaataaaGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcgt < 2:567504/140‑1 (MQ=255) taaaataaaGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcgt < 1:4174414/140‑1 (MQ=255) taaaGTAGTCTCATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGta < 1:1717600/140‑1 (MQ=255) tagtctcATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTaataat < 1:3670710/137‑1 (MQ=255) tagtctcATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTaataat > 1:138965/4‑140 (MQ=255) tctcATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCTATTATTCATTTTTCGCTACCAGCAAAGAGAGATCGTGCTTCACCAGCGCGCGACTGGCACTCTCCCGCTAACCGTCGTCTGTTATAATCTg > 2:3695072/1‑140 (MQ=255) tctcATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGCGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCCAACCGTCGTCGGTAATAATCTg > 2:4016199/1‑140 (MQ=255) tctcATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTg > 2:2647009/1‑140 (MQ=255) tctcATG‑CTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAGCCTTCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTg > 2:3143949/1‑140 (MQ=255) | CAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTCATG‑C‑T‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGA > NZ_CP025268/2862594‑2862865 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |