| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,239,247 | (T)6→7 | intergenic (+264/‑18) | ygjR → / → alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,239,241 | 1 | . | T | 96.5% | 1039.4 / 22.9 | 290 | intergenic (+258/‑24) | ygjR/alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Reads supporting (aligned to +/- strand): ref base . (3/7); new base T (104/175); total (107/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 325 total aligned reads displayed.
TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 | tgtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCg > 1:2295820/1‑140 (MQ=255) gtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t > 2:4194282/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:855427/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:2278667/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:3331455/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:2172707/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:4860052/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:4769366/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTGGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCGGACGTCTTCCGACGTTGGCCG‑t‑t > 2:1426139/1‑140 (MQ=255) aaaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑ttt‑tt > 1:2244891/1‑140 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑ttt‑ttt < 1:4157269/140‑2 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑ttt‑ttt < 1:3167467/140‑2 (MQ=255) aaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑ttt‑tttat < 1:1264865/140‑4 (MQ=255) caTCCGGTCACCGGGCAACTCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTa < 2:4208993/140‑1 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTa > 1:2099142/1‑140 (MQ=255) tCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAg > 2:4145323/1‑140 (MQ=255) ccGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAgg < 2:1263784/140‑1 (MQ=255) ccGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAgg < 1:4603178/140‑1 (MQ=255) ccGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTATGCTGTAAGTGAGACCTTGCAGGAAGGCGAGGTCTATGCATTAAAAGCAGCGGCTGACGTCTACCGACGATGGCCGTT‑TTT‑TTATGTGTAAgg < 1:3044196/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACt < 2:317719/140‑1 (MQ=255) cGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTa > 1:2484533/1‑140 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATa > 2:167280/1‑140 (MQ=255) aGGAATACGCAGACCTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGACGTCTATGCATAAAAATCAGCGGGTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGACCTTCTATGAATACTGTCgg < 2:2505872/140‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:3006497/140‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:4107082/140‑1 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACg > 2:2844222/1‑140 (MQ=255) aTACGCAGACGTAGTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑TTTGTTATGTGTAAGGAAGTTCTATGAATACTGTCGGCACg > 2:806842/1‑140 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCCGAAGGCGCGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATTTGTAAGGAACTTCTATGAATACTGTCGCCACGc > 2:1207615/1‑140 (MQ=255) cGCAGCCGTATTCCCTTATTGATGTAAGTGAGACCTTGCCGGACGGAGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTAGGCCGTT‑TTT‑TTATGTCTACGGAACTTCTATGAATACTGTCGGCACGCCg < 2:2764967/140‑1 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 1:3266704/1‑140 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 2:2439171/1‑140 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 1:955111/1‑140 (MQ=255) cGTATTCCTTTTTGGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTa < 2:148035/140‑1 (MQ=255) tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCGGTTGCTATg > 2:1696797/1‑140 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGGCGTTGCTATggg > 2:700975/1‑140 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg > 1:4172105/1‑140 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg > 2:2412207/1‑140 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg > 1:2384044/1‑140 (MQ=255) tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg < 1:148241/140‑1 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 1:5038262/1‑140 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 1:4925137/1‑140 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑ttt‑tttat > 2:4609690/1‑86 (MQ=255) ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAt > 2:2136685/1‑140 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 1:4860052/140‑1 (MQ=255) ttgttgTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc > 2:1503774/1‑140 (MQ=255) tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCg < 1:3836336/140‑1 (MQ=255) tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCg < 1:370102/140‑1 (MQ=255) tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg < 1:216971/140‑1 (MQ=255) gtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgt > 2:1869710/1‑140 (MQ=255) aaGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttg < 1:3421873/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:4391250/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:1134477/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:1423440/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:1662402/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:5022283/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:2117564/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:3545158/140‑1 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 2:4523671/1‑140 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:510517/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 2:3584313/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:178638/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt < 1:4638733/140‑1 (MQ=255) tGCCGGAAGGCGAGGTCCATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 2:203454/1‑140 (MQ=255) gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAttc > 1:4512811/1‑139 (MQ=255) ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTAt > 1:1987178/1‑140 (MQ=255) ggACGGCGAGGTCTATGGATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATCCTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGc < 1:643569/140‑1 (MQ=255) ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGc < 1:4779861/140‑1 (MQ=255) gAAGGCGAGGTCCATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCt < 1:4351543/140‑1 (MQ=255) tCTATGCATACAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 1:593472/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCggc < 1:4083079/140‑3 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 1:257402/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:4050656/140‑1 (MQ=255) cTATGCATAAAACGCAGCGCCTGCCGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGACCTTCTATGCATACTGTCAGCACGCCGTTGCTATGGCCCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTCTCGAcc < 2:1944741/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt > 1:2286443/1‑140 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 2:2693014/140‑1 (MQ=255) gCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgtt < 2:2883597/140‑1 (MQ=255) tAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTgttgtt > 1:1378584/1‑140 (MQ=255) aaaaaGCAGCGGCTGACGGCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACGTGttgttg > 1:2681648/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 2:4961296/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 2:3533826/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTAGGTGTAAGTAACGTCTATGCATACTGTATGGACGCCGTTGCTAGGGGGGGGGTGCGATGGTGTTGGCGCAATTATGCTGGCGATCGACCCGtggttga > 2:943411/1‑139 (MQ=255) cagcGGCTGACGTCTTCCGGCGTTGGCCG‑TCTTT‑GTAGGTGTAGGGGTCTTCTGTGAAGACTGTCGGCACGCCGTTGCTAGGGGGCGGCTACGCTGTTGTTGTCGGCATGCTGCTGGCTATGCAGCTGTTGTTGGAgggg < 2:3466784/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 1:1310079/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 1:3458437/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 1:1894314/140‑1 (MQ=255) tGACGTCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 2:2654499/140‑1 (MQ=255) tctcCCGCCGTTGGCCGTT‑TTT‑TTATGTTTAAGGGCATTCTGTACATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCCCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:3070038/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:2971046/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:2384044/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:276352/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:2844222/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:177530/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:3663113/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:3911298/140‑1 (MQ=255) ccGACGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 1:1027607/1‑140 (MQ=255) aCGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGcca > 1:3334069/1‑140 (MQ=255) cGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:4312920/140‑1 (MQ=255) cGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:4933070/140‑1 (MQ=255) cGTTGGCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 1:4419952/140‑1 (MQ=255) ggCCGTT‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 1:1771776/140‑1 (MQ=255) | TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑TTT‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |