BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	= 779967	351 (1.190)	6 (0.030) +ATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAA	6/176	9.1	3.1%	noncoding (76/76 nt)	CXP41_RS04095	tRNA‑Lys
*	?	NZ_CP025268	= 2525348	232 (0.790)		6/176	9.1	3.1%	noncoding (61/76 nt)	CXP41_RS13270	tRNA‑Lys
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 351 total aligned reads displayed.

CTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCA  >  NZ_CP025268/779829‑780106

        gCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACa                                                                                                                                       <  1:2713465/140‑1 (MQ=33)

        cccccccccTTACAGGGGGGGGGTGGGGGGTCCGTCCCCGCCATCACCACCCCCCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACa                                                                                                                                       <  2:2553134/134‑1 (MQ=11)

          aCCTCCCTTACAAGGAGGGGGTCGGCTGTTTGATCCCGTCATCACCCACCAGCGGGTCGTTAG‑CTCAGTTGGCAGGGCAGTTGACTTTTAGTCGATTAGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATc                                                                                                                                     >  1:3057223/1‑140 (MQ=11)

          aCCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATc                                                                                                                                     >  2:441843/1‑140 (MQ=33)

             tCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGaa                                                                                                                                  <  1:4377642/140‑1 (MQ=37)

              cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACGGGGTCGTTAG‑CGTAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑GAGGGTCGAATCCTGCACGGCCCACCAGTTTTAATATCGAAg                                                                                                                                 >  2:2426713/1‑140 (MQ=11)

              cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCCTCGGTT‑GTAGAGGAGTTTACTTTTAATCAATTGGTCGCCGGGTTCG‑ATCCTTCCCGACCCACCAGGTTTAAACTCGaaa                                                                                                                                 >  1:4933401/1‑139 (MQ=11)

              cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGGTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAg                                                                                                                                 >  1:516336/1‑140 (MQ=37)

               ccttcataggtggGGGTCGGGAGCTAGAACCCGCCAGCACCCACCACCGGGGCGTTAG‑GTCAGAGGGTAGGGCAGTTGACATTTGATCACTCGGGCG‑TAAGTTCGAATCCTGCACGACCCACCAGTTTTAACATcgacga                                                                                                                                <  2:3849411/133‑1 (MQ=2)

               ccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGa                                                                                                                                <  1:1985916/140‑1 (MQ=38)

               ccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGa                                                                                                                                <  1:2300208/140‑1 (MQ=38)

               ccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGa                                                                                                                                <  1:2785698/140‑1 (MQ=38)

                       ggaggCGGTCGGTGATTCGATCCCGACATCACCCAACACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGtt                                                                                                                        <  2:3380423/140‑1 (MQ=14)

                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      >  1:625328/1‑140 (MQ=255)

                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      >  2:2410378/1‑140 (MQ=255)

                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      <  2:509431/140‑1 (MQ=255)

                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      <  1:1738297/140‑1 (MQ=255)

                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGGCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGGTaa                                                                                                                      >  2:144770/1‑140 (MQ=255)

                         aggCGGTCGGCGGTTCGATCCCATCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      <  2:4755571/140‑1 (MQ=255)

                         agagggTCGGCGCTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTGG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      <  2:4634721/137‑1 (MQ=255)

                         agacgggcggcggTTCAATCCCATCATCACCCAACACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      <  2:2181605/133‑1 (MQ=14)

                           ggggTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACGCACCAATGTTAACATCGAACTCAGATGtgaggc                                                                                                                    >  2:2099929/1‑135 (MQ=11)

                           ggggTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGc                                                                                                                    >  2:3099211/1‑140 (MQ=255)

                           ggggTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGc                                                                                                                    >  2:3212186/1‑140 (MQ=255)

                             ggTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCgt                                                                                                                  <  1:1793165/140‑1 (MQ=255)

                              gTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCgtg                                                                                                                 <  2:4233509/140‑1 (MQ=255)

                               tCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGt                                                                                                                         >  1:4720057/1‑131 (MQ=255)

                                  gcggTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAACACAGATGTTAAGCGTGTAgg                                                                                                             >  1:301727/1‑140 (MQ=255)

                                       tCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAAc                                                                                                        <  1:3212186/140‑1 (MQ=255)

                                                tcatcaCCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTaa                                                                                                                      <  1:717231/117‑1 (MQ=255)

                                                tcatcaCCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCa                                                                                               >  2:1750448/1‑140 (MQ=255)

                                                   tcaCCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCa                                                                                            <  1:4217117/140‑1 (MQ=255)

                                                     acccaccACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑TAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGTAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAAc                                                                                          <  1:2831765/140‑1 (MQ=255)

                                                     acccaccACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAAc                                                                                          <  1:4051427/140‑1 (MQ=255)

                                                     acacgccacgGGGTCGTTCG‑CTCAGTTGGTAGAGCAGTTGACTGTTAATCACTTGGGCG‑CAGGTTCGAATCCTGCACGACCCACCAGTCTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAAc                                                                                          <  2:4279632/135‑1 (MQ=14)

                                                           caccGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCg                                                                                    >  2:4438381/1‑140 (MQ=255)

                                                               gggTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAgg                                                                                <  1:2203090/140‑1 (MQ=255)

                                                                 gTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTTAGCAACGGCCCGAAgggg                                                                              >  2:2632532/1‑139 (MQ=255)

                                                                 gTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGgc                                                                              >  1:376532/1‑140 (MQ=255)

                                                                     ttAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTGT‑CAGTTATGAATCTCGCACGCTCCCCCCGATTTCACATCTATAGCTCTCGTTAAGCGCGTAAGCAAACGTTGCGTCAGCAACGGCCCGTAGGgcgag‑c                                                                         >  2:2301368/1‑140 (MQ=2)

                                                                     ttAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGgcgagg                                                                          >  2:1891637/1‑139 (MQ=255)

                                                                        g‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGag‑cgaa                                                                      <  1:4403346/140‑1 (MQ=255)

                                                                        g‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGag‑cgaa                                                                      <  2:558586/140‑1 (MQ=255)

                                                                        g‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGag‑cgaa                                                                      <  2:4921204/140‑1 (MQ=255)

                                                                        g‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGag‑cgaa                                                                      <  2:1996765/140‑1 (MQ=255)

                                                                        g‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGag‑cgaa                                                                      <  1:4458944/140‑1 (MQ=255)

                                                                        g‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGag‑cgaa                                                                      <  1:3421014/140‑1 (MQ=255)

                                                                             aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGag‑cgaa‑g‑cga                                                                >  1:1465706/1‑140 (MQ=18)

                                                                              gTTGGTAGCGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCCCCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAg                                                               <  2:150535/140‑1 (MQ=255)

                                                                              gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAg                                                               <  2:2693426/140‑1 (MQ=255)

                                                                              gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAg                                                               <  1:1011466/140‑1 (MQ=255)

                                                                              gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAg                                                               <  1:3314586/140‑1 (MQ=255)

                                                                              gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAg                                                               <  2:4357940/140‑1 (MQ=255)

                                                                              gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAg                                                               <  1:3700316/140‑1 (MQ=255)

                                                                                 ggTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTTTCATCGTAGTCAGGCGATAAGCGAGTAGGACAACGTTGCGTTCGCCGGGAGCCGTAGGGGGGG‑AGAA‑G‑CGAGTCa                                                            <  2:4576739/140‑1 (MQ=2)

                                                                                 ggTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCa                                                            <  2:3543719/140‑1 (MQ=255)

                                                                                 ggTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCa                                                            <  1:1552411/140‑1 (MQ=255)

                                                                                 ggTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCa                                                            <  2:2057719/140‑1 (MQ=255)

                                                                                       gCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCTAG‑CGAA‑G‑CGAGTCACCCTGc                                                      >  2:1350903/1‑140 (MQ=255)

                                                                                        cAGTTGATTTTTAATCACGTGGTAG‑GAGGTTCGACAACAGAACGACCCACCCGTTTTAACCTAGAAGAAAGATGTTAAGCGTGTGGGATACCGTTGCGTCAGCAACGGCCAGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCa                                                     <  2:3872861/140‑1 (MQ=14)

                                                                                        cAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCa                                                     <  1:3412510/140‑1 (MQ=255)

                                                                                        cAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCa                                                     <  2:376532/140‑1 (MQ=255)

                                                                                        cAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCa                                                     <  1:2473986/140‑1 (MQ=255)

                                                                                        cAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCa                                                     <  1:2016938/140‑1 (MQ=255)

                                                                                        cAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCa                                                     <  1:793758/140‑1 (MQ=255)

                                                                                        cAGTTGACCTTAAGTCAATTGGTGG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGGCAGATGTAAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCa                                                     <  2:4049089/140‑1 (MQ=14)

                                                                                           ttGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGa                                                  >  2:689632/1‑140 (MQ=255)

                                                                                            tGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGAAGGGCGAGAGGAAGG‑CGAGACATCCTGCACg                                                   >  1:3520717/1‑140 (MQ=14)

                                                                                             gagttttCATGAATCGGTCG‑CAGGTTCGAATCCCGCACGACCCACCAGTTTTCACATCGCAGACAGATGTTAAGCGTGTAGCATCACGTTGCTTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGAcc                                                <  2:2815329/137‑1 (MQ=14)

                                                                                             gACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGAcc                                                <  1:1167334/140‑1 (MQ=255)

                                                                                             gACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGAcc                                                <  1:3125877/140‑1 (MQ=255)

                                                                                             gACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGAcc                                                <  1:4585914/140‑1 (MQ=255)

                                                                                                ttttAATCAATGGGTCG‑AGGGTTGGATTCTGGAAGGACCCA‑CAGTTTTAACGTCGGTGACTGGTGTTGAGCGTGTAGGATGACGATGCGTCAGCAACGGCCCGTAGGGCGAGACGAA‑GTCGAGTCATCCTGCACGACcca                                              <  2:3057223/140‑1 (MQ=2)

                                                                                                  ttAAGCAATTTGTAG‑CAGGGTCGAATCCTGCACGGCCAAACATTTATAACAGAGAAGACAGGTGTAAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACccacca                                           <  2:5080753/140‑1 (MQ=14)

                                                                                                     aTCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAg                                                               >  1:852661/1‑117 (MQ=255)

                                                                                                     aTCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTa                                        <  2:296739/140‑1 (MQ=255)

                                                                                                             gTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGt                                <  2:3496142/140‑1 (MQ=255)

                                                                                                                      ttCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCgg                        <  1:3551103/140‑1 (MQ=255)

                                                                                                                           aTCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGaa                   <  1:5093311/140‑1 (MQ=255)

                                                                                                                           aTCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGaa                   <  1:925552/140‑1 (MQ=255)

                                                                                                                           aTCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGaa                   <  1:138154/140‑1 (MQ=255)

                                                                                                                           aTCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGaa                   <  2:867915/140‑1 (MQ=255)

                                                                                                                            tCCTGCACGACCCACCAGTTTTAACATCGAAGCCAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAag                  <  1:3941823/140‑1 (MQ=255)

                                                                                                                               tGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagtag               >  1:396755/1‑140 (MQ=255)

                                                                                                                                gCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagtagt              <  1:2580801/140‑1 (MQ=255)

                                                                                                                                gCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagtagt              <  1:3372759/140‑1 (MQ=255)

                                                                                                                                gCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagtagt              <  2:1012714/140‑1 (MQ=255)

                                                                                                                                gCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagtagt              <  1:50744/140‑1 (MQ=255)

                                                                                                                                gCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagtagt              <  2:121414/140‑1 (MQ=255)

                                                                                                                                 cACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGtt             >  1:3511189/1‑140 (MQ=255)

                                                                                                                                     aCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCTGTGGAAGTAGTTTgta         <  2:4468911/140‑1 (MQ=255)

                                                                                                                                      cccACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCTTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTGTgtag        >  1:3909429/1‑140 (MQ=255)

                                                                                                                                      cccACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgtag        >  1:1663286/1‑140 (MQ=255)

                                                                                                                                      cccACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGAAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTCCGGGGGAAGTAGTGTgtag        >  1:1839963/1‑140 (MQ=255)

                                                                                                                                         accaGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCTTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGCCCGGAGGAAGTAGTTTGCAGTAt     >  1:1261413/1‑140 (MQ=18)

                                                                                                                                         accaGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTCTTAAAGGTGGGCGCGGTGGAAGAAGCTTgtagtaa     >  2:4023807/1‑139 (MQ=17)

                                                                                                                                          ccaGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATc    <  1:2631347/140‑1 (MQ=255)

                                                                                                                                          ccaGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATc    <  1:4514691/140‑1 (MQ=255)

                                                                                                                                          ccaGTTTTAACATCGAAGACAGATGTTAAGAGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATc    <  1:949586/140‑1 (MQ=255)

                                                                                                                                           caGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGGTCGGTGGAAGTAGTTTGTAGTATcc   >  1:3463713/1‑140 (MQ=255)

CTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAG‑CTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCG‑CAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA‑G‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCA  >  NZ_CP025268/779829‑780106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.