| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 1,762,571 | +CTGGT | pseudogene (969/1000 nt) | ldtE ← | L,D‑transpeptidase LdtE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 1762570 | 3 (0.010) | 256 (0.900) +TCTGG |
83/264 | 0.4 | 98.9% | pseudogene (970/1000 nt) | ldtE | L,D‑transpeptidase LdtE |
| ? | NZ_CP025268 | 1762571 = | 3 (0.010) | pseudogene (969/1000 nt) | ldtE | L,D‑transpeptidase LdtE | |||||
Only 100 of 274 total aligned reads displayed.
GCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTTTA > NZ_CP025268/1762432‑1762709 | gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt < 1:2927117‑M1/140‑2 (MQ=255)gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt < 1:2331042‑M1/140‑2 (MQ=255)gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt > 1:4255122‑M1/1‑139 (MQ=255) cTAACAAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTCTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTACCTTGCtc < 2:1971119‑M1/140‑3 (MQ=255) ccATCGTCTGGACAACATGGCTACTAAATACCGCAATTAATAGTACCTGTGAAGTGAAAAATGTCGCACATTGTGCGCCATTTTTTTTGTCTGCCTTTTACCGCTACTGCGTCACGCGTAACATGTTCGCTTACtcttgt > 2:4905064/1‑135 (MQ=255) ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAATTGTAAAATGTCGCACATTGTGCGCCATTTTTTTTTTCTGCCGTTTGCCGCTACTGCGTCACTCTTAACATATTTCCTTGCtctggt > 2:3017746‑M1/1‑134 (MQ=255) ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggt > 1:1936999‑M1/1‑134 (MQ=255) cAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggtt < 2:473768‑M1/140‑8 (MQ=255) gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca < 2:1465117‑M1/140‑10 (MQ=255) cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac > 1:850438‑M1/1‑130 (MQ=255) cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac > 1:1316568‑M1/1‑130 (MQ=255) tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccatt < 2:168471‑M1/140‑15 (MQ=255) acaTGGCTACTAAATACCGCAAGGAATAGTACCTGTGAAGTGAAAAATGGGGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCgctggttcaccattcggcgc > 2:1390976‑M1/1‑120 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct < 1:3424123‑M1/140‑22 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct > 2:4610480‑M1/1‑119 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct > 2:3291390‑M1/1‑119 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct < 1:254388‑M1/140‑22 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct < 1:3724920‑M1/140‑22 (MQ=255) caTGGCTACAAAATACCGCAAGAAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct > 1:126174‑M1/1‑119 (MQ=255) aaTACCGCAAGTAATATTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactga < 1:497506‑M1/140‑33 (MQ=255) tACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaag > 2:2136125‑M1/1‑106 (MQ=255) aCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaagg > 2:3500276‑M1/1‑105 (MQ=255) aCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaagg > 2:3867317‑M1/1‑105 (MQ=255) aCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTATGCGCCATTTTTTTTGTCTGCTGTTTACCGCTACTGCGTCCCGCGTAACATATTCCATTGCtcttgttcaccgttctttgttgactctactggagg > 2:3154745‑M1/1‑105 (MQ=255) cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcg > 1:5036725‑M1/1‑103 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca > 1:89873‑M1/1‑101 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca > 1:4660533‑M1/1‑101 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca > 2:861613‑M1/1‑101 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca > 1:3877789‑M1/1‑101 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca > 1:1486169‑M1/1‑101 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccatactgcgctgactctcctgaatgcgca > 2:4634430‑M1/1‑101 (MQ=255) aaTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgct < 1:3500276‑M1/140‑45 (MQ=255) aaTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgct > 1:2190428‑M1/1‑96 (MQ=255) aGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggc > 2:3621994‑M1/1‑93 (MQ=255) aGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggc > 1:4736410‑M1/1‑93 (MQ=255) ccTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcg > 2:3352898‑M1/1‑89 (MQ=255) ccTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcg > 1:1069447‑M1/1‑89 (MQ=255) cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg > 1:3357414‑M1/1‑88 (MQ=255) tgtgACGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg < 2:1990785‑M1/140‑54 (MQ=255) tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg < 1:1687935‑M1/140‑54 (MQ=255) tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg < 1:4477437‑M1/140‑54 (MQ=255) tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg < 2:1268413‑M1/140‑54 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 1:3543627‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 2:3982603‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgac < 2:2103477‑M1/110‑25 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTGTACCGCTACTGCGTCACGCGTAAAATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 2:2591764‑M1/1‑86 (MQ=255) tgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggag > 1:4666492‑M1/1‑85 (MQ=255) tgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggag < 1:5068408‑M1/140‑56 (MQ=255) gaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagt < 1:3157809‑M1/140‑57 (MQ=255) agtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgacggcgcattgctggctgcgggagttg < 2:3060685‑M1/140‑59 (MQ=255) gtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc > 2:787373‑M1/1‑81 (MQ=255) aaaaaTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcc > 2:958045‑M1/1‑78 (MQ=255) aaaaaTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcc > 2:1130683‑M1/1‑78 (MQ=255) aTGGCGCACAATGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactg < 2:1670856‑M1/140‑67 (MQ=255) gcACATTGTGCGCCATTTTTTTTGTCTGCCGTGTCTCGCTACTGCGTCACGCGTAACATATTCCTTTGCtctggttcaccattctgcgctgactcgactgaaggcgcattgctggctgcgggagttgctccactgctcac < 2:2513550‑M1/140‑72 (MQ=255) gcACATTGTCCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcac < 2:2371959‑M1/140‑72 (MQ=255) acaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg < 1:1983150‑M1/140‑74 (MQ=255) acaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg < 2:1808995‑M1/140‑74 (MQ=255) acaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg < 1:3977548‑M1/140‑74 (MQ=255) aTTTTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgcctctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa < 2:517354‑M1/140‑76 (MQ=255) gcgcCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccgg > 2:2650106‑M1/1‑60 (MQ=255) ttttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctg < 1:1018116‑M1/140‑89 (MQ=255) ttttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctg < 1:1378463‑M1/140‑89 (MQ=255) ttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcagcattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcc < 1:2847914‑M1/140‑91 (MQ=255) tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga < 2:550573‑M1/140‑94 (MQ=255) tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga < 1:1783268‑M1/140‑94 (MQ=255) gCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgata < 2:3124901‑M1/140‑99 (MQ=255) ctaCTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttat > 1:2417227‑M1/2‑31 (MQ=255) cTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcga < 2:3389201‑M1/140‑113 (MQ=255) gCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgact < 1:1470576‑M1/140‑115 (MQ=255) gTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaa > 2:3780004‑M1/1‑24 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcacccttctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgcctaacttc > 2:4199665‑M1/1‑20 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 2:1155254‑M1/1‑20 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 2:4516051‑M1/1‑20 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgagacaacgctttatcgactaacttc > 2:663948‑M1/1‑20 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagtcgctccactgctcaccgacaccggataccctgcccgacgatacaacgctgtgtcgactaacttc > 2:2767704‑M1/1‑20 (MQ=255) cgcgTAACATATTCCCTTGCtctggttcaccattctgcgctgaccctactgaaggcgcattgctggctgcgggagctgctccacagctcaccgaaaccggataacctgcccgacgaaacaacccgttatcgcctaacttc > 2:1318477‑M1/1‑20 (MQ=255) cgcgTAACATATTCCCTTGCgctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 2:5035012‑M1/1‑20 (MQ=255) gcgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttct < 2:2185236‑M1/140‑122 (MQ=255) cgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgcttgctgctggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctg > 1:2104268‑M1/1‑18 (MQ=255) cgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctg > 2:2847188‑M1/1‑18 (MQ=255) cgTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctg > 1:4102259‑M1/1‑18 (MQ=255) aaCATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatc > 2:3671595‑M1/1‑15 (MQ=255) aaCATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatc > 2:983077‑M1/1‑15 (MQ=255) cATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 1:2752449‑M1/140‑128 (MQ=255) cATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 2:4573387‑M1/140‑128 (MQ=255) cATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 1:764406‑M1/140‑128 (MQ=255) cATATTACCTTGCtctggttccccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacatcgctttatcgactaacttgtgatcta < 2:4882472‑M1/140‑128 (MQ=255) tCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagcc > 2:4995065‑M1/1‑8 (MQ=255) cTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggcggtgctccactgctcaccgaaaccggataccctgcccggcgatacaacgctttatcgactaacttctgatcgacagcctga > 2:1587247‑M1/1‑5 (MQ=255) ttGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 1:1544466‑M1/140‑137 (MQ=255) ttGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 1:1130683‑M1/140‑137 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:4087063‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:2298110‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:1761543‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:1176880‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:4271232‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:4999630‑M1/1‑3 (MQ=255) ctctggttcaccattctgcgctgactttactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttcttatctacagccttattgt > 2:59646‑M1/1‑1 (MQ=255) ctctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcac < 1:5021459‑M1/72‑72 (MQ=255) | GCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTTTA > NZ_CP025268/1762432‑1762709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |