Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 2,896,268 +CAC coding (42/258 nt) ygcO → ferredoxin family protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 28962685 (0.020)343 (1.190)
+CAC
97/270 0.2 98.6% coding (42/258 nt) ygcO ferredoxin family protein
?NZ_CP025268 2896269 = 5 (0.020)coding (43/258 nt) ygcO ferredoxin family protein

Only 100 of 351 total aligned reads displayed.

GTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTT  >  NZ_CP025268/2896130‑2896407
                                                                                                                                           |                                                                                                                                          
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                            <  1:4163704‑M2/1‑1 (MQ=255)
 taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacAt                                                                                                                                           >  1:4993708‑M2/139‑140 (MQ=255)
 taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacAt                                                                                                                                           >  1:1274798‑M2/139‑140 (MQ=255)
      ctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggccggtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTc                                                                                                                                      >  1:3063273‑M2/134‑140 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCg                                                                                                                                    >  2:3010189‑M2/132‑140 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCg                                                                                                                                    >  1:3570594‑M2/132‑140 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCg                                                                                                                                    >  1:3139721‑M2/132‑140 (MQ=255)
          tccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGc                                                                                                                                  >  1:1016953‑M2/130‑140 (MQ=255)
            caccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatgtggcgggcgatgttatcaggagactgcgacgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTg                                                                                                                                >  2:406094‑M2/128‑140 (MQ=255)
              ccgctgcgccagttattctggcatcatttacgtcgtcacggccagtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGAc                                                                                                                              >  2:4671785‑M2/126‑140 (MQ=255)
               cgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACt                                                                                                                             <  1:3590471‑M2/16‑1 (MQ=255)
                gctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTc                                                                                                                            >  1:4076595‑M2/124‑140 (MQ=255)
                gctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTc                                                                                                                            >  2:1482983‑M2/124‑140 (MQ=255)
                gctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatccctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTc                                                                                                                            >  2:426256‑M2/124‑140 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                         >  1:4424011‑M2/121‑140 (MQ=255)
                    cgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgcagcacATTGTTCCGGCTGACTCCGtt                                                                                                                        <  2:4564814‑M2/21‑1 (MQ=255)
                       cagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAg                                                                                                                     <  1:4437253‑M2/24‑1 (MQ=255)
                       cagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAg                                                                                                                     <  2:2070726‑M2/24‑1 (MQ=255)
                                  gcatcatttacgtcgtcacggcctgttgcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGc                                                                                                          >  1:2791833‑M2/106‑140 (MQ=255)
                                  gcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGc                                                                                                          >  1:459998‑M2/106‑140 (MQ=255)
                                    atcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGcgccagagattac                                                                                                        <  1:2400146‑M2/37‑7 (MQ=255)
                                          tacgtcgtcacggcctgtggcatttggcgggcgatgttattaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                  <  1:4674579‑M2/43‑1 (MQ=255)
                                          tacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                  <  2:633891‑M2/43‑1 (MQ=255)
                                          tacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                  <  2:3717835‑M2/43‑1 (MQ=255)
                                          tacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                  <  2:674916‑M2/43‑1 (MQ=255)
                                          tacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                  <  2:199875‑M2/43‑1 (MQ=255)
                                            cgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTg                                                                                                >  2:3501233‑M2/96‑140 (MQ=255)
                                            cgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTg                                                                                                >  1:1382156‑M2/96‑140 (MQ=255)
                                               cgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGAtt                                                                                             <  1:3287762‑M2/48‑1 (MQ=255)
                                                 tcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTaa                                                                                           >  1:2042489‑M2/91‑140 (MQ=255)
                                                           tggcatctggcgggcgatgttatcaggcgtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCg                                                                                 >  1:1745772‑M2/81‑140 (MQ=255)
                                                             gcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGc                                                                               <  2:4937591‑M2/62‑1 (MQ=255)
                                                             gcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGc                                                                               <  1:2187126‑M2/62‑1 (MQ=255)
                                                                   ggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCt                                                                         >  1:1177892‑M2/73‑140 (MQ=255)
                                                                   ggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCt                                                                         >  1:2593030‑M2/73‑140 (MQ=255)
                                                                   ggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgccccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCt                                                                         >  1:4036740‑M2/73‑140 (MQ=255)
                                                                     cgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCttt                                                                       >  2:2957826‑M2/71‑140 (MQ=255)
                                                                       ggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCa                                                                                                                <  1:1615781‑M2/29‑1 (MQ=255)
                                                                       ggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCa                                                                                                                >  2:1615781‑M2/69‑97 (MQ=255)
                                                                       ggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCttttt                                                                     <  1:1532983‑M2/72‑1 (MQ=255)
                                                                            tgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                <  2:1786505‑M2/77‑1 (MQ=255)
                                                                              ttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTTACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTca                                                              <  2:4232818‑M2/79‑1 (MQ=255)
                                                                                 tcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCacac                                                           >  2:3949490‑M2/59‑140 (MQ=255)
                                                                                  caggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTCTTCGCTCACAcc                                                          <  2:5027136‑M2/83‑1 (MQ=255)
                                                                                   aggagtctgcgatgtctgtagctcgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCATAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCg                                                         <  2:2829653‑M2/84‑1 (MQ=255)
                                                                                   aggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCg                                                         <  1:3952025‑M2/84‑1 (MQ=255)
                                                                                     gagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGa                                                       <  1:4259960‑M2/86‑1 (MQ=255)
                                                                                     gagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGa                                                       <  1:669543‑M2/86‑1 (MQ=255)
                                                                                      agtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTGACACCGGaa                                                      >  1:2787294‑M2/54‑140 (MQ=255)
                                                                                      agtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGaa                                                      >  2:2921837‑M2/54‑140 (MQ=255)
                                                                                       gtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAg                                                     >  1:4802422‑M2/53‑140 (MQ=255)
                                                                                       gtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAg                                                     <  1:3345409‑M2/88‑1 (MQ=255)
                                                                                        tgtgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAgg                                                    >  2:3141148‑M2/52‑140 (MQ=255)
                                                                                        tctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAgg                                                    >  1:1560101‑M2/52‑140 (MQ=255)
                                                                                        tctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAgg                                                    >  2:3772753‑M2/52‑140 (MQ=255)
                                                                                        tctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAgg                                                    >  1:3225553‑M2/52‑140 (MQ=255)
                                                                                         ctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                   <  2:2492038‑M2/90‑1 (MQ=255)
                                                                                         ctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                   <  2:13386‑M2/90‑1 (MQ=255)
                                                                                         ctgccatgtctgtagcccgtcatcgctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCACAACGGTTTATTAACGCCTGTCCGGCAGCTCTTTTTTCGCTCAAACCGGAAGGt                                                   <  2:2658324‑M2/90‑1 (MQ=255)
                                                                                         ccgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                   <  1:2226222‑M2/90‑1 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                  >  1:965517‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                  >  2:2267693‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                  >  2:2149756‑M2/50‑140 (MQ=255)
                                                                                           gcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTaa                                                 <  1:2470003‑M2/92‑1 (MQ=255)
                                                                                              atgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACtt                                              <  2:70750‑M2/95‑1 (MQ=255)
                                                                                                 tctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGCGCGCCAGCCGGCAGAACGGTTGATTAACGCCTGTCCCGCAGTTCTTTTTTCGCTCACACCGGCAGGTCACTTACg                                           >  2:4440783‑M2/43‑140 (MQ=255)
                                                                                                   tgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTa                                         >  1:4522164‑M2/41‑140 (MQ=255)
                                                                                                   tgtagcccgtaatcgctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTa                                         <  2:4799432‑M2/100‑1 (MQ=255)
                                                                                                     tcgcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTAtt                                       <  1:2674690‑M2/102‑1 (MQ=255)
                                                                                                     tagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTAtt                                       <  1:2375884‑M2/102‑1 (MQ=255)
                                                                                                     tagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTAtt                                       <  1:11392‑M2/102‑1 (MQ=255)
                                                                                                     tagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTAtt                                       <  1:908431‑M2/102‑1 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCCGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACTTATTGACTAt                                 >  1:1815132‑M2/33‑140 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                >  2:3314258‑M2/33‑109 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                <  1:3314258‑M2/77‑1 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTAt                                 <  2:965517‑M2/108‑1 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTAt                                 >  1:385097‑M2/33‑140 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTAt                                 >  1:3884510‑M2/33‑140 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTAt                                 >  1:4879300‑M2/33‑140 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcggcgcacATTGTTGCGGCTGACTCCGTGGAGCGCCAGACGGCAGAACGGTTGATTAACGCCGGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:1932106‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:1305244‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:143498‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:2149756‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:3653263‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:4856439‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:5043715‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:603731‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:1016953‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:3570594‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:1225358‑M2/112‑1 (MQ=255)
                                                                                                                ctctggcgctttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTCTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAg                            <  2:363543‑M2/113‑1 (MQ=255)
                                                                                                                ctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAg                            <  1:4836939‑M2/113‑1 (MQ=255)
                                                                                                                 tctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGt                           >  1:736274‑M2/27‑140 (MQ=255)
                                                                                                                     gcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGcc                       <  2:2574252‑M2/118‑1 (MQ=255)
                                                                                                                       gcgttgatgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCACCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGTTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTg                     <  2:1712063‑M2/120‑1 (MQ=255)
                                                                                                                          ttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                   >  2:278861‑M2/18‑107 (MQ=255)
                                                                                                                             ctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAgtgt               <  1:3417697‑M2/126‑1 (MQ=255)
                                                                                                                                  gcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCAc          <  1:4734159‑M2/131‑1 (MQ=255)
                                                                                                                                  gcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCAc          <  1:1954781‑M2/131‑1 (MQ=255)
                                                                                                                                     ccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTg       >  2:401029‑M2/7‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                          
GTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTT  >  NZ_CP025268/2896130‑2896407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.