BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	674,619	T→C	pseudogene (977/977 nt)	ybeQ ←	SEL1‑like repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	674,619	0	T	C	99.7%	1101.4 / NA	331	pseudogene (977/977 nt)	ybeQ	SEL1‑like repeat protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (152/177); minor base A (0/1); total (152/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 331 total aligned reads displayed.

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTC‑C‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGG  >  NZ_CP025268/674482‑674753

   aaGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAg                                                                                                                                     >  2:4730682/1‑140 (MQ=255)

     gTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTa                                                                                                                                   <  2:1026922/140‑1 (MQ=255)

      tGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTaa                                                                                                                                  <  1:3323758/140‑1 (MQ=255)

           aCGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCtt                                                                                                                             <  2:461726/140‑1 (MQ=255)

           aCGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCtt                                                                                                                             <  2:2513680/140‑1 (MQ=255)

             gCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCa                                                                                                                           <  1:981893/140‑1 (MQ=255)

                aTGCCCGAAATGTGTTCATGCGCAGTTCCAGAGACGCCCGTTTGAGGCGTAATAGTATGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTAGCCGGCGCTTGTTTTTATGTCTACAGTAAATCTTCAGtc                                                                                                                        >  2:5022071/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAGGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                        >  1:4515390/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAGATCTTGAGtt                                                                                                                        >  1:4689733/1‑139 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                        >  2:688386/1‑140 (MQ=255)

                  gCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtctc                                                                                                                      >  2:3967388/1‑140 (MQ=255)

                       aaaTGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGaa                                                                                                                 >  1:1722813/1‑140 (MQ=255)

                       aaaTGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGaa                                                                                                                 >  2:4369697/1‑140 (MQ=255)

                             ggTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTTATTTGGCACAGCAAGAAAGAGAATATGGGCGGAATGAAATTCCCCAGCCCTTGTTTTTATTTCTACAGTAAATATTCAGTCTCACGAATTTc‑ct                                                                                                          >  2:62970/1‑139 (MQ=255)

                                 aTGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATACAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTc‑ctgact                                                                                                      <  1:3174469/140‑6 (MQ=255)

                                   gACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑ctgactga                                                                                                    >  2:767588/1‑140 (MQ=255)

                                    aCCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAACAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTgactgac                                                                                                   <  2:1205389/140‑1 (MQ=255)

                                      cAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGACTTTC‑CTGCCTGACAt                                                                                                 >  2:3503845/1‑140 (MQ=255)

                                         ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACAtctc                                                                                              <  2:2431497/140‑1 (MQ=255)

                                         ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACAtctc                                                                                              >  2:2362521/1‑140 (MQ=255)

                                         ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACAtctc                                                                                              >  2:4318285/1‑140 (MQ=255)

                                              gagaCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGtt                                                                                         >  1:716748/1‑140 (MQ=255)

                                                 aCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCg                                                                                      <  1:4933484/140‑1 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTTGTTCCGGa                                                                                    >  2:3457098/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:3248635/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:2530166/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    <  2:4614293/140‑1 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:4679616/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:819220/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:4865775/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:1194848/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:1970011/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:1472251/1‑140 (MQ=255)

                                                   gCCCGTTGGAACCGTAATAGTCTGATTTCGCACAGCAATAAAGCGAATATGGGCCGAATGAAATTCACCAGCCCTTGATTTTATCTCTACAGTAAATCGTCAGTCTCAAGAATTTCAT‑GACTAACGTCTCTgggtaagaa                                                                                    >  2:1135775/1‑133 (MQ=255)

                                                    cccGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGAt                                                                                   >  2:3804563/1‑140 (MQ=255)

                                                      cGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGa                                                                                 <  2:2720571/140‑1 (MQ=255)

                                                         ttGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTg                                                                              >  2:1615397/1‑140 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:212091/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  2:738626/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:1385629/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  2:1293292/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:867629/140‑1 (MQ=255)

                                                                gTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTa                                                                       <  2:3081490/140‑1 (MQ=255)

                                                                gTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTa                                                                       <  1:2204411/140‑1 (MQ=255)

                                                                gTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTa                                                                       <  1:3475198/140‑1 (MQ=255)

                                                                     aGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATa                                                                  <  1:4186832/140‑1 (MQ=255)

                                                                     aGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATa                                                                  <  1:162416/140‑1 (MQ=255)

                                                                     aGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATa                                                                  <  2:3947892/140‑1 (MQ=255)

                                                                      gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                 <  2:4513292/140‑1 (MQ=255)

                                                                       tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                <  1:1454758/140‑1 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                            >  1:4583064/1‑140 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                            >  2:3280126/1‑140 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGCGCCGAATGAAATTCCCCGGCCCTTGTTTTTCTGCCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                            >  1:780781/1‑140 (MQ=255)

                                                                              tCGCACAGCAATAAAGAGAGTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCgag                                                         <  1:1231783/140‑1 (MQ=255)

                                                                               cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCgaga                                                        <  1:2773459/140‑1 (MQ=255)

                                                                                 cacaGCAATAAAGAGAATATGGGACGAATGCAATTCCCCGGCCCTTGTTTTAATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                      >  1:3043940/1‑140 (MQ=255)

                                                                                     gCAATAAAGAGAATATGGGCCGAGTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATGTC‑CTGACTGACATCTCTGGGTCCGGATGGCGGAACTTTACGATACAGGTCGAGAGccggg                                                  >  2:2891703/1‑137 (MQ=255)

                                                                                      cAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTc                                                 >  1:2690845/1‑140 (MQ=255)

                                                                                               gaATATGGGCCGAATGACGTTCCCCGGCCCTTGGTTTGATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTGCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGa                                        <  1:3264608/140‑1 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTgactgac                                                                                                   >  2:1471427/1‑80 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTTAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:1696268/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACTATACAGGTCGGGAGCCAGTCTGAGATCAAc                                       >  1:4002146/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:4784641/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:2921059/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:2667578/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGACCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:4562155/1‑140 (MQ=255)

                                                                                                 atatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                      >  2:2055415/1‑140 (MQ=255)

                                                                                                   atGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAgg                                    <  2:3325625/140‑1 (MQ=255)

                                                                                                       gCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTctt                                >  1:1876581/1‑140 (MQ=255)

                                                                                                        ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                               <  1:3397102/140‑1 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTCTCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGCGCCTGTCGGAGATCGACAGGTcttcct                             >  2:1809947/1‑140 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcct                             >  2:3709632/1‑140 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcct                             <  1:1026770/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  2:2640628/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  1:2472266/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  1:1543489/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  1:3550857/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTAACTGAAATCTCTGGTTCCGGATAACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  1:3682647/140‑1 (MQ=255)

                                                                                                                   tCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGCTGACTGAACTTTACGATACAGGTCGAGAGCCTCTCGGAGATCGACAGGTCTCCCTTCTCCGTAg                    <  2:1746853/140‑1 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                 <  1:4083431/93‑1 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                 >  2:4083431/1‑93 (MQ=255)

                                                                                                                      ccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGa                 <  2:2127797/140‑1 (MQ=255)

                                                                                                                      ccGGCCCTTGTTTTTATCTCTACAGTAAATATTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCATGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGa                 <  1:280582/140‑1 (MQ=255)

                                                                                                                       cGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGACCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                <  1:4392066/140‑1 (MQ=255)

                                                                                                                          cccTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACa             <  2:900275/140‑1 (MQ=255)

                                                                                                                          cccTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACa             >  1:691476/1‑140 (MQ=255)

                                                                                                                           ccTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACAt            <  2:1893976/140‑1 (MQ=255)

                                                                                                                             ttGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATaa          <  1:3807999/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAGTCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAGAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  2:3635816/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:1615397/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  2:1921837/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:4318236/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:2296900/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:182978/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:3662411/140‑1 (MQ=255)

                                                                                                                                    tATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCCGATGACTGAACTTTACGATACAGCTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCCCCGTCGTGATACATAATGGCCAg   >  1:3595530/1‑140 (MQ=255)

                                                                                                                                     aTCTCTACAGTCACTCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGCCTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  1:543293/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGCCATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  1:2848225/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  2:2178906/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  2:556526/140‑1 (MQ=255)

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTC‑C‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGG  >  NZ_CP025268/674482‑674753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`