| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,013,596 | T→C | pseudogene (539/542 nt) *370* (TAA→TAG) |
zapC → ycbX ← |
cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,013,596 | 0 | T | C | 99.3% | 911.0 / NA | 276 | pseudogene (539/542 nt) *370* (TAA→TAG) | zapC ycbX | cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (158/114); minor base A (2/0); total (162/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 276 total aligned reads displayed.
GCCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTT‑G‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCC > NZ_CP025268/1013460‑1013730 | cGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAAc > 1:2254854/1‑140 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 2:4214691/140‑1 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 1:1471361/140‑1 (MQ=255) tGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa > 2:2052485/1‑140 (MQ=255) gctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTATAACGCGCCAACTTaa > 2:513739/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGAGAGCTTCAGCCTCGAACAGGCCGTCTAACGCGCCAACTTAAg > 2:4318761/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAg > 2:4425668/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAg > 1:3207273/1‑140 (MQ=255) ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACGTAAg > 2:2718723/1‑140 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 2:424060/140‑1 (MQ=255) ggCACAACCCTGCGTAGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCCACGCCATTAAAATCATGAACGACAGGCTCAAACCCCAGGATAATGTTGACACCTCCAGCCTCGAACAGGCAGTCTAACGCGCCAACTGAAGTg > 2:3419271/1‑140 (MQ=255) cacaACCTTTCGTTGTTATTGCGGGTCGTCCGGTGCAGTT‑GAGCGACGCCAGTGAAATCGTGAACGACAGGCTGAAACCACAGGTTAATGTTGACAGCTTTAGCATCGAACAGGCAGTATTACCCTCCAACGTAAGTgga > 2:2854027/1‑138 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 1:3593068/1‑140 (MQ=255) aCCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCt > 1:2974299/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGCTGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 2:3734594/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 1:790143/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 2:3465575/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 1:501680/140‑1 (MQ=255) ccTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTc < 2:4912356/140‑1 (MQ=255) ccTGCGGTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGCGGCCATTAAAAGCAAGAGCGACAGGTTGAGACGGCGGGTGAATGTGGAGAGCTTCAGCCTGTAACAGGGAGGCGAACCCGCCAAACTAAGTGCAgggtct > 2:3953337/1‑135 (MQ=255) cTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCg > 1:2406873/1‑140 (MQ=255) cTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGATGATAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCg > 1:3626001/1‑140 (MQ=255) tGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACCGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTGCgg > 2:273953/1‑140 (MQ=255) gCGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGt > 2:2365474/1‑140 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 2:2352325/140‑1 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa > 1:5071867/1‑140 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 1:3693569/140‑1 (MQ=255) cGTTGTTATTCCGGGTCCCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa < 2:3117314/140‑1 (MQ=255) gttATTGTGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTAcaca > 1:2004369/1‑140 (MQ=255) ttATTGCGGGTCGCGCGCTGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:2216152/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACCGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:4783419/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:1881534/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:3890370/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:2174719/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:3465700/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:1478849/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:3267357/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:2890527/1‑140 (MQ=255) tATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGCCAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACCGc < 2:1105854/140‑1 (MQ=255) tATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGc > 1:2184951/1‑140 (MQ=255) tATTGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGc < 1:212372/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAGAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTCAAGTGCAGTCTTCGGTACACAGCTa < 2:4575155/140‑1 (MQ=255) gCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa < 2:2230548/140‑1 (MQ=255) gCGGGTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa < 1:4183854/140‑1 (MQ=255) ggTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGACCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa < 1:4681893/140‑1 (MQ=255) ggTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa < 1:3535813/140‑1 (MQ=255) ggTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 1:4936765/1‑140 (MQ=255) ggTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 2:2582616/1‑140 (MQ=255) ggTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 2:4750605/1‑140 (MQ=255) ggTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 1:1636547/1‑140 (MQ=255) ggTCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 1:3369526/1‑140 (MQ=255) tCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAAcgcg < 2:3638785/101‑1 (MQ=255) tCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa > 1:108021/1‑140 (MQ=255) tCGCGCGATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa > 1:1195303/1‑140 (MQ=255) cgcgATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGTACCCGCAGGTTAAGGTTGACAGCTTCAGCCCAGAACAGGCAGTCTCCGGCGCCAACTTAAGTGCAGACTTCTGTACACAGCTACAGCaaaaca > 2:637671/1‑137 (MQ=255) cgcgATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAGGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa < 2:2016216/140‑1 (MQ=255) cgcgATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa > 1:2515803/1‑140 (MQ=255) gcgATGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAAt < 1:1970410/140‑1 (MQ=255) tGCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTg < 2:3851455/140‑1 (MQ=255) gCAGTTGG‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGc < 1:4824155/140‑1 (MQ=255) ttgg‑gCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatc > 1:2658889/4‑140 (MQ=255) ttgg‑gCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatc > 1:853323/4‑140 (MQ=255) g‑gCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCatcatc > 1:1678569/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 2:3399728/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc < 2:1379527/140‑1 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 1:1046040/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 1:724136/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAATGCAGGCTTCGGCACACAGCTACAGCACAGAATGGTGCCATCATCGc > 2:1267122/1‑140 (MQ=255) gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGcc < 2:1834371/140‑1 (MQ=255) cGCCATTAACATCATGAACGACAGGCTGAAACCGCAGGCTAATGTTGCCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACCTAAGTGCAGTCTTCCGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa > 2:1228548/1‑140 (MQ=255) cGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa > 1:4321460/1‑140 (MQ=255) cATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTg < 1:3010154/140‑1 (MQ=255) ttAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCt > 2:3212989/1‑140 (MQ=255) aaaTCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAt < 2:4337321/140‑1 (MQ=255) aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACCGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAtttttt > 1:2590424/1‑140 (MQ=255) aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAtttttt > 2:1297686/1‑140 (MQ=255) aaCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAg < 2:1372008/140‑1 (MQ=255) aaCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAg < 1:2716651/140‑1 (MQ=255) cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggcg > 1:4579617/1‑140 (MQ=255) tGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACt < 2:1982055/140‑1 (MQ=255) cGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCt < 2:3898412/140‑1 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTc > 2:499345/1‑140 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTc > 2:2393576/1‑140 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTc > 1:1940129/1‑140 (MQ=255) cAGATTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTGCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTAGTTTTTTCAGCGGCGTGACTGCGCCTTc > 2:1786774/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc > 1:1853838/1‑35 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 2:2949398/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:3494243/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:492831/1‑140 (MQ=255) aGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACg < 2:1548958/140‑1 (MQ=255) cTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGc < 2:3866368/140‑1 (MQ=255) ttCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCa < 2:4117912/140‑1 (MQ=255) ttCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCa < 2:1117429/140‑1 (MQ=255) ttCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTATTCGGTACACAGCTACAGCAAAGAATGGTGCCATCGTCGTCGATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCa < 2:3051282/140‑1 (MQ=255) cAGCCTCGAACCGGCAATCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAAc > 1:204472/1‑140 (MQ=255) gCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACtt < 1:3376685/140‑1 (MQ=255) gAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCcaca > 1:2669085/1‑140 (MQ=255) aaCAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATGTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTGCCACaa > 1:3959553/1‑140 (MQ=255) gCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGcc > 2:778447/1‑140 (MQ=255) gCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGcc > 2:3347149/1‑140 (MQ=255) | GCCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTT‑G‑GCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCC > NZ_CP025268/1013460‑1013730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |